AMCG00002323


Basic Information

Item Value
gene id AMCG00002323
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 11602210 ~ 11612235 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002323
ctccctctctgtctccctctctctcagccctgGCACCTTTTCTCAGCAGCATGGTGAACAGATAACTGCCTCTGCATCTCAGCagccccccccaacccaccccAACCCCAGCCCCCCTCAGACGGCCACTATGGGCTCCTGCATTAGCAAAGAGTTCCACAGCGCCCCCCAACACCCCTGCACAGAACTGCAGCAGCCTTGCCCTGAGGGGACGCCCATAATGAAGGAGCAGACAGTATTTTGCTGGGACCCTCTGCAGCAATGCTTCAAGCCCTCCTCCAATGGGACGGAACGGAAGGTTGCCCCCGGTTACGATGTGACGGAGCTGGCCACCTCCTCACTGCTGGGCCTGGTGGCAACCTTTAAGGATCACATCACCAAGCCCACTGCAATGGCCCAGGGTCGAGTGGCCCACCTGATCGAGTGGAAGGGCTGGGGCAGCTCCGGACAGCGGGACTGGGGGGTTGGCGCTGGCCAGCACACCTGGGTGGGGGCGCCCGGGCAGCGAGACTGGGGGGGgctgcaggagcaggagcagtaCAGCGACCTCAGCGACGAGCTCAAGGAGGCCAGGTTTGCCGCAGGAGTCGCGGAGCAGTTTGCCCTGGCCGAAGCCTCCCTGAGTGCCTGGTCCTCGATGGAGGCCCTGGAGGAACCTGATGGGAGCAGCATCCTGCTCCCAGACTCAGATGGACCATACCTCTCTCAGTTCCCGCCCAATGGCGCCCCCTGGCTGTACAGTGAGGTCGACACCGCTGGGCCCCTCTCCCCGCTGCCCTCTTCTGCGCCCCCCTTGCCCCACCCtggagaggagacagagggtGGTGTCTCACCCTCCAGACTCGGCCCCTCCTTGTACACGGGGCCAGGCGAGGAGGTGGAAGCAGAGAAGAAGACAGGGTGCCCCCTGGTGGTCAGGAGGACGTCGTGTGGGGACGGGGCCCTGAGACACGCAGACAGCAGCTCCCTCTCAGAAGATGAAGTTTTTTACAACTAGTGCTGGCCTTGTGTGTTCaccgctctcctcctcctcctcctcctcctcccttctccttCCTACTTGACCAAGCCTCTCATTTTatcctctctcctctttctgtctttttgtcttGTCTCTTTCTCCACGCtgtctcctccctctctctctctcccactcctcATTACTCTCccctctatctctgtctctctctacatGTGTGACTCTcaactcagcagctgttttgtgtgtttctttgtgtttctgttgtaaaGTGCTGTTCTAGAGCAGGCCTCTGTGCTGTGGTTCAGTGCCTTGGGGTCCTGCTGTATCAGGTGTTACCCCGGGACTCAAAGGGAAGGACAATTGGCCTGCCCAAATTAAAGACCCGCTCTGGACTATGGCAGAGAGCTCCCACTGCCTCCCTCTCTGCTGTATTCTGCCCCACCGCACACCCCAAGAACTGTGAACTCATCGCCCTGCAGAGTGATGGAAGGCAACAGCCTTTCACACTGGAGTCTCCAGGCAAGTGGATTTTGTCCCTCAGGACTGTGGATTTCACCTGGGAGGTGGGACACATGGAGTCATGCAGTCCAGGCAGTCCAGTCAGCCAGTGAGTGTCTCAATGTGTCCAGCCAGTCTGCCAGTTTGTATATCAATCAGTCAGCCTCAGTCAGTGTATCTGTCAGCCTGTCAGCCaatccagtcagtcagtttctCCGCTGCAGCCGACCTGTTGACCCCAGTCCTGCAGATCCTCCAGCTTGTCCCTGCAGTGTCTCCTGAAGTGTTTCTTAAGAGCTGGCAAGTCCAGTTAGACTCTCAGCTTTAACTGCAGCCGCAGGGATGTTTCCCAGTGTTTCCCGGAGCGTCTCTGAAGGGGACAAACTTCCAATGCCTCTTTTTTGACTGGACTCCCTGTCTCCCGTGGCCTCCGCTTGCCAAGGCAGCAGGGAAGGCCAGAGGGGACCCAGGCCCAGTCTGATTTGGGCCAACAATAATGATAGAGTAAAAACTATCGATGTTTGTGAATgtggaataaataaaagtgtcttTATCTAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002323 True 2040 mRNA 0.58 7 11602210 11612235

Neighbor

gene id symbol gene type direction distance location
AMCG00002316 NA coding upstream 14316 11565009 ~ 11587894 (+)
AMCG00002314 NA coding upstream 195746 11392955 ~ 11406464 (+)
AMCG00002307 LOC105898973,LOC106572187,LOC103032744 coding upstream 330881 11255732 ~ 11271329 (+)
AMCG00002309 NA coding upstream 357230 11214084 ~ 11244980 (+)
AMCG00002308 NA coding upstream 400209 11144009 ~ 11202001 (+)
AMCG00002325 NA coding downstream 11546 11623781 ~ 11628341 (+)
AMCG00002324 zbtb17 coding downstream 24578 11636813 ~ 11644784 (+)
AMCG00002329 NA coding downstream 119370 11731605 ~ 11738113 (+)
AMCG00002332 NA coding downstream 126089 11738324 ~ 11741047 (+)
AMCG00002330 NA coding downstream 139416 11751651 ~ 11766591 (+)
G122478 NA non-coding upstream 58589 11543104 ~ 11543621 (+)
G122471 NA non-coding upstream 68750 11530886 ~ 11533460 (+)
G122470 NA non-coding upstream 74112 11525232 ~ 11528098 (+)
G122469 NA non-coding upstream 78588 11523227 ~ 11523622 (+)
G122468 NA non-coding upstream 79096 11522872 ~ 11523114 (+)
G122501 NA non-coding downstream 73197 11685432 ~ 11686318 (+)
G122549 NA non-coding downstream 104120 11716355 ~ 11716701 (+)
G122592 NA non-coding downstream 244243 11856478 ~ 11857326 (+)
G122737 NA non-coding downstream 492435 12104670 ~ 12105523 (+)
G122743 NA non-coding downstream 516145 12128380 ~ 12129678 (+)
AMCG00002311 ttll10 other upstream 222642 11365614 ~ 11379568 (+)
AMCG00002310 NA other upstream 242370 11357552 ~ 11359840 (+)
AMCG00002296 NA other upstream 848317 10714799 ~ 10753893 (+)
AMCG00002294 rere other upstream 997371 10567912 ~ 10604839 (+)
AMCG00002272 NA other upstream 1750898 9844205 ~ 9851312 (+)
G122482 NA other downstream 16777 11629012 ~ 11630892 (+)
AMCG00002331 NA other downstream 76365 11688600 ~ 11694165 (+)
AMCG00002339 NA other downstream 98215 11710450 ~ 11715372 (+)
G122582 NA other downstream 223204 11835439 ~ 11836169 (+)
AMCG00002355 NA other downstream 282238 11894473 ~ 11898701 (+)

Expression


Co-expression Network