AMCG00002330


Basic Information

Item Value
gene id AMCG00002330
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 11751651 ~ 11766591 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002330
ATGGCAGAGGAAGGCAGGTCTGGGCACTTCGTGAGACACATGGTGGAGCAGGCAAGTGGCAGGGCAGCTAGAGCTGAGCTGGAGCAGGCCCTGCGTGTGGACTCCGGGGAGAGGGAGCGAGATGCGCAGGAGTCACGCAGTCTGGCACAGCAGAATGCAGAGCTGCGCAGACggctggaggaggagcaggcCGCGTACAAGCGCAAACTCACCGCCTACCAGGAGGGGCAGCAGAGGCAGGCGCAGCTGGTGCAGAAACTGCAGGCCAAGGAAGAACAGCAGAGaAGTTCTAGTCTAGCCCAAGTGAATTCTATGCTCCGTGACCAGCTGGACCAGGCCAACACAGCCAATCAGGCTCTGAGCGAGGACATCCGCAAGCTGACAGCTGATTGGACGAAGGCTCGGGAGGAGCTGGAGCAAAGGGAGTCTGattggaggagagaggaggagtCATTCCACAGTTATTTCAGCAGTGAGCACAGTCGTCTGCTGTCTCTCTGGCGCCAGGTGGTGGGATTTCGCCGCCATGTCTGTGAAGTGAAGAGCGCCACTGAGAGAGACCTGGCGGAGGTGCGCAGTGAGCTGGCACGTGTGTCTCGGGGAGCACTGTCCTCCTGTGTCAGTCTGCGTGCCAGTGAGGGTGGGGTGGCCTTGGCGCAGGAGAGGCAGCGGGCACAGCTGGCACAGCTGGAGGAGCAGCTCAGGGCCAAGGTGGGCGAGATGCTGCAGCTTCAGGCCAGCTGTGACACAGAGAGGGCAGAGGAGCAGGATGGCGGTGCGGAGCAGGAGTTGCAGACCCTGAGAGCACAGACTGAGGCCCTGCAACAAACACTAAGAGACATTGCACAGggggagggggacagtCTGGCTGCATCTCTTGCTCCTCTACTCCGTTCCCCCTCACCCCGACGATCTGCCTCCCCCCTTCGCTCCCCCTCTCCCCGAAGGCCCCGCCTCCCTGGCCCCCCCGAGACCAGCCTCGCTGCCCTGCGCTCGGCCATCAGCAACCGGCAAGTCCTCACACAGGAGCTCCGTGGACGTATGGAGTCTGCGCAGGAGCAACTGGCAGGTGTGCGCAGGCAGCTGTCTGAtgaGAAGGCCAGTCTGGAGAGGGCAGTGCAGGCTGCGCAGGAGAAGGACAGCTCTCTCCGGGACTCCCTGGCCAAGCTGAGTGGCCTGAACGAGGCGTTGGCCCAGGACAAGACAGAGCTCAGTGCCATCATCAGCCAGctGGAGGAGGAAAAGGCTGCCCTGCTGAGCCAGAAGAGGGAGGCGGAGCAGGAGAAGCTGTCAATCAGAGACGAGCTTGTGCGATTGGAGCAGGAGAAGCTGGACCTTGACTCTGCCCGCCAGGGGCTGGACGATTCGCTGCAGGAGGTGGAGCAAAGCAGGGTGGATTTGGAGGCGGAGCTACGGGCCCAGAAGGCGGAGCGAGGACAGCTGCAGGAGAAACTGACCCAGGTGTCGCGGCAGTGCGGTGTTCTGGAGGGGGAGCTGTGCCAGGTGCGGCAGGAGGGGCAGCGGCAGGCAGAGGCGCTGGCACAAGCGGGCCGGGCTCTGGAGGAGGCAACCCGGGAGCGTGCCAGTGTGCTGGTCCAGCTCGCCGCCTCTGAGAGGGACAACCGCGCGCTCAgtGAGGTGCGGAGGCtgcggggggagggggaggcggCGCAGGCCCAGTGGGATCATGAGCGAGAGCAGCTGACCCAGGCGGTGACCAGGGCCGAGCAGGACACCCAGCTTACCCTGCGCTCTGCCCGCGATGCTCACTTGCAGGACAGCGAGAGACTGACCCGTGAGAAGGCGGAGCGGGATGAGGCGCTGAGGAGGCTGAGGCAGGAGGCAGAGGAGGCGGCGCAGAGGCAAGAGGCAGAGATGGAGGAGTTGAGGGAGGAGCTGAGCGCACTGCTGCAGGACAGAGACCAGGGCTTACTGCAGGCAGAGAGCGACAAGCAACAGCTGGAAGAGGCTCGCGGTGCGATGTCTGTGAGCGAGGAGAGCCGTGATTTGCTGCGGAGGGAGCAGCTGGAAGCGGAGCGGCGAATCAGGGAATGCCAGAGTGAGGGGGAGGGGCTGCGGCGGGAAGTGGCAGAGCTTCGGAGGGCTCTGAGTGATGTCACCAAGGAGAAAGAGACCCTGCAGACCTCCAACACTCAGCTCAGAGACACACTGAGGAGCACAGAGAGTGACAGgatcagTGTGCGCAGGCAGTGTGAGGAGAGGGAGCAGAGGCTGGCGGTGCTGGAGGAGGCACGGGCATCTGCCGAGCGGGAGGTCAGCGAGCTGCGGGCTGCCTTGAGGGAGGTCGAGAGGTCACGGCTGGAGGCGCGCAGGGAGCTGCAAGAGCTGCGCAGACAGgtgaAGCTTCTGGACAGTGAGCGGGAGCAGCGCAGTGCCGAGGTGTCAGAGCTACAGGCACGCACAGTTTTGGGGGAGCAGCGCGAGGAGGAGTCGCGGAGGGAGGTGTTCAGTCTCAAACAGAGGCTCAGCGAGGCTGAGGCAGCCAGGAACAGCGCAAAGAAAGAgGgtctgtctctgcagggccGGGTTGCGGAGCTGGAGGTGGAGTGGCGCGGGCGTGAGCGCGAGCTGCTGGGGCAACTGGAGGAGGAACGGGCCACAGAGCGGGCGCTGCAGGAGGAAGCACGGGCGCTGACCAAGCGTGCAGAGGCTGTGCAGGCAGAGCTGGCACAGCGGGGGCTGGAGCTCAGTGCCGCGGGAGGGCGGCTGGCTGGGCTGGAGGCGGAGCTGGGCAGGGCCGAGGGGCGGCGCCGCGAGCTGGAGTTCCAACTTGCCAGCCTGCACTCTGCTCTCAGCCGCACGCTGGGCATCGGAATTGGGGCTGGACGGGGGCGGGGCCGTGGCAGGAGCCCTGCCACCCACCCCCACCAGCGCAGCCTGTCCCCTCGCCGCTCGCTGTCACCCCCTAAAATTTGGGACGAGACTCAGGGCAGTCCCCAGGGCTGCAGCGAGACCCCGGAGAGGAGCCCGGGTTCAAGACCCCCCTCCCCAGAGCGCAGCGACGCCCCCCCACCCAACCTGGACCCGGAGCTGGTGCGCAGCGGCCTGAGAGACTTCGTACAGGAGCTCAGAGaaacccagagagagaggcagcaggaggaggcaGTGCGGCGTGGGGAGAGAGAGCGCAGCGCCCTGACCGACAGAGTGAGGGCGCTGGAGAGCAACCTGCACAGCACAGAGTCACAGAGACGCTTTGCACAGGAGCAGGTGAGTAAGCTGCGTGCGGGCGAGGCGCGGCTAGAGGCAGAGAGGCGCCGGCTGCGGGAGGCCCTGGAGGTGGCGGAGGCGAGGGGCACCAGGCTGGAGGTGGCACGGCGCAGCCTGGAGGGGGAGCTGCAGAGGCTGAAGTTGGGGCTGGGGGAGCGGGAGAGCGAGGTACAGGGCACACAGGGACGCATCGATGCCCTCAACACACAGGTGTCTGAGGGGGCGGAGCGGGCGGCAGCGCTGCAGAGGGAGGTGGACAGACTGACCCAGGCGCTGAGCCGAGCGCAGGAGAACGAGGCGGCGCTGACGGAGCGGGCGCACGCCCTGGCACACAGCCTGGCCCAGACTGGCGCCGAGCAGAGCGCCGCTGAGGAGCGCCTGGCCAGCCTGCAGAGGACGCTGGGCACCAGCGAGCAGGAGCGACGCCTCCTACagGAGAGGCTGGACAGTGCTCGGGCGGCGGCGGCAGAGGGGAAGCGCAACGTGGCGGCCCTCACTGAGCGCGTGCAGAGCCTGCAGGATGACATCGCCCAGAGTGAGCAAAACAGGAGGGAGCTGGAGGAACAGCTGAGCCACACACAGGagGCCCTGCGGGAGCGCGTGCAGGCAGGGGAGGAGGCACAGCGCAGTGTGGAGAGGCTGCAGGCAGAGCGGGCCCTGGGGACAGAGAGGCTACGCGGCCTGCAACGGGCGCTGGCACAGCTGGAGGGTGAGAAGAGGGAGGCGGAGAGAGCGGCAGGGAGACTGGAGAAAGACAAGAACGCACTGAGGATCACTCTGGAGAAGGTGGAGCGGGAGAGGCTGCAGTGTGAGGAAGgcagtgtgcgtctgtgtgccGAGCGGGGCAGACTGGACCGGTCTCTGTCCAGTGCCGAGCTGGAGCTGCAGGACGCCCTGCGCCAGGTCTCACTGCTGCAGgcCCAATTGGCGGAGATGGAGCAGGGTGGAGGGGTGCTGGAGGCGGCAAGGCAGCGGGAGGAGGCCCAGCGCGAGGCCGACAGGCTGAGGGCGGCACAGAGGGAGGCAGAGCGCACCCTGGAGGGCAGGGAGAGAGCACACCGGCAGAGAGTGCGAGGGCTGGAGGAGCAGGAGCTCAGGGAAATCCCCCCCACCATcatctcttctcctctccctcaccttgttattttttaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002330 True 4383 mRNA 0.66 28 11751651 11766591

Neighbor

gene id symbol gene type direction distance location
AMCG00002332 NA coding upstream 10604 11738324 ~ 11741047 (+)
AMCG00002329 NA coding upstream 13538 11731605 ~ 11738113 (+)
AMCG00002324 zbtb17 coding upstream 106867 11636813 ~ 11644784 (+)
AMCG00002325 NA coding upstream 123310 11623781 ~ 11628341 (+)
AMCG00002323 NA coding upstream 139416 11602210 ~ 11612235 (+)
AMCG00002343 NA coding downstream 24823 11791414 ~ 11792870 (+)
AMCG00002340 NA coding downstream 27029 11793620 ~ 11797734 (+)
AMCG00002341 NA coding downstream 31693 11798284 ~ 11800507 (+)
AMCG00002342 atad3a,LOC103357928 coding downstream 39107 11805698 ~ 11813640 (+)
AMCG00002344 NA coding downstream 71269 11837860 ~ 11845019 (+)
G122549 NA non-coding upstream 34950 11716355 ~ 11716701 (+)
G122501 NA non-coding upstream 65333 11685432 ~ 11686318 (+)
G122478 NA non-coding upstream 208030 11543104 ~ 11543621 (+)
G122471 NA non-coding upstream 218191 11530886 ~ 11533460 (+)
G122470 NA non-coding upstream 223553 11525232 ~ 11528098 (+)
G122592 NA non-coding downstream 89887 11856478 ~ 11857326 (+)
G122737 NA non-coding downstream 338079 12104670 ~ 12105523 (+)
G122743 NA non-coding downstream 361789 12128380 ~ 12129678 (+)
G122744 NA non-coding downstream 363287 12129878 ~ 12130747 (+)
G122829 NA non-coding downstream 606210 12372801 ~ 12373031 (+)
AMCG00002339 NA other upstream 36279 11710450 ~ 11715372 (+)
AMCG00002331 NA other upstream 57486 11688600 ~ 11694165 (+)
G122482 NA other upstream 120759 11629012 ~ 11630892 (+)
AMCG00002311 ttll10 other upstream 372083 11365614 ~ 11379568 (+)
AMCG00002310 NA other upstream 391811 11357552 ~ 11359840 (+)
G122582 NA other downstream 68848 11835439 ~ 11836169 (+)
AMCG00002355 NA other downstream 127882 11894473 ~ 11898701 (+)
AMCG00002360 NA other downstream 245380 12011971 ~ 12016084 (+)
G122746 NA other downstream 367195 12133786 ~ 12140465 (+)
AMCG00002390 NA other downstream 1265168 13031759 ~ 13051971 (+)

Expression


Co-expression Network