AMCG00002331


Basic Information

Item Value
gene id AMCG00002331
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 11688600 ~ 11694165 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002331
GGCTCGGCAGAAACTTCTGGAAAAGAcgctgagagaggagagagaaacttTCACCCACCGAGGaaatactaaacaaaattaTAGCTATATACAACTGCCAACACCACCAAACAAAGCCTTATCAAACAGGAAAATACTTGGAGTTACCCGCTTTCACCCACGAATAAGCTTTGCCCTGCAGCCTACAAACATCCgctggtttaaaataaaacttgaagggagtcattaaaaatattaacttgGTTCTTTTTGGGGAATATAATTATGGTGGAAACGAACCATATCTCAGCCtggctttatttaaaaaaacacacacggaGCTACAAACTGGCTCAGATCTGTAATCTTTACAAAGAGAATAAAACCCAGTTTACTTACACACGAATTGTGGGCTCTGGTCTGATTGGGATCTATTGAATTCACAGCTTCGTCTGCCTTGTCCCTTTTCCCTTTGTGTCTTGGAATTATCCTTGGAAGgaattaaaaaagtgaataaaatcagtggATGTATTGTTAAACCCCGATTTACATcaccttttaaaaacactgaaagaattagtaacaaaacaaagcaacttCCCGGggaattaactggattaatgtGCAGACACAATGTATGCACTAGTAATGGGAGATGTAAAAAAGCAGCTGGTATTTTTTGTCAGGAAAGAACTAcgtgtggtttaaaaaaatgatgttttCACACTGTATAAAGTGAAGGTATGGCGAAGATAAGAGCCCCTGGACCACAAGCGTTGGAGTGTTGTCCTGGtgcagggagaggaggagggactGGGGTCTTACAGATGGCTCCTAGGAAGGAGATCAAGTACGAGGACCGGCTGGCGATCGTGTCTCTGCACCAGCAGGGCCTGTCGGGCCGGGCCATCGCACGGCAGGTCAACGTGTCGCACAACGGCGTGCAGACCACCTTGAGCCGCTACCGTCAGACAGGCAGCTGCGTCAACAAGCGGGGGCGCGGGCGCAAGAGGAAGACCAGCCGGCAGCAGGACCGGCAGATCGTGCGGCGCTGTGTGGCCGACCGTTGGCAGACCAGCACGCAACTGGCCGCCCAATTCAACGCCACCGCCGCCGTGTGCATCTCTAAGGAGACGGTGAAGCGGCGGCTGCGCGAGGCCGGGATGATGTGGACGGCGGCGGGAGGGGACAAGGGGGCGGCGACGACCAGGGCTCTGCAGAAGAGGCGCGGCGtggcaagggaggaggcagacAGAAAGTCGCGACCCTCAGACACACCTAGGAGACAGAGGACTGACACTAAGACTCACAAACTAACAGGAGTGAAAAGAAGAGGAGGGGGCTGTGATTGTGGAGACTGA
>TU153608
TCGGCGCTCGGCTCGGCAGAAACTTCTGGAAAAGAcgctgagagaggagagagaaacttTCACCCACCGAGGaaatactaaacaaaattaTAGCTATATACAACTGCCAACACCACCAAACAAAGCCTTATCAAACAGGAAAATACTTGGAGTTACCCGCTTTCACCCACGAATAAGCTTTGCCCTGCAGCCTACAAACATCCgctggtttaaaataaaacttgaagggagtcattaaaaatattaacttgGTTCTTTTTGGGGAATATAATTATGGTGGAAACGAACCATATCTCAGCCtggctttatttaaaaaaacacacacggaGCTACAAACTGGCTCAGATCTGTAATCTTTACAAAGAGAATAAAACCCAGTTTACTTACACACGAATTGTGGGCTCTGGTCTGATTGGGATCTATTGAATTCACAGCTTCGTCTGCCTTGTCCCTTTTCCCTTTGTGTCTTGGAATTATCCTTGGAAGgaattaaaaaagtgaataaaatcagtggATGTATTGTTAAACCCCGATTTACATcaccttttaaaaacactgaaagaattagtaacaaaacaaagcaacttCCCGGggaattaactggattaatgtGCAGACACAATGTATGCACTAGTAATGGGAGATGTAAAAAAGCAGCTGGTATTTTTTGTCAGGAAAGAACTAcgtgtggtttaaaaaaatgatgttttCACACTGTATAAAGTGAAGGTATGGCGAAGATAAGTGATGCAGTGAGTTCAGCCTGATTGAGGAATCATAATTCAACAGCAACGCCACAGAAACAACAACTATAGCACAGCAAAGACTCAAGACTCAACTGGCACCCCTATCTTAGAGCCCCTGGACCACAAGCGTTGGAGTGTTGTCCTGGtgcagggagaggaggagggactGGGGTCTTACAGATGGCTCCTAGGAAGGAGATCAAGTACGAGGACCGGCTGGCGATCGTGTCTCTGCACCAGCAGGGCCTGTCGGGCCGGGCCATCGCACGGCAGGTCAACGTGTCGCACAACGGCGTGCAGACCACCTTGAGCCGCTACCGTCAGACAGGCAGCTGCGTCAACAAGCGGGGGCGCGGGCGCAAGAGGAAGACCAGCCGGCAGCAGGACCGGCAGATCGTGCGGCGCTGTGTGGCCGACCGTTGGCAGACCAGCACGCAACTGGCCGCCCAATTCAACGCCACCGCCGCCGTGTGCATCTCTAAGGAGACGGTGAAGCGGCGGCTGCGCGAGGCCGGGATGATGTGGACGGCGGCGGGAGGGGACAAGGGGGCGGCGACGACCAGGGCTCTGCAGAAGAGGCGCGGCGtggcaagggaggaggcagacAGAAAGTCGCGACCCTCAGACACACCTAGGAGACAGAGGACTGACACTAAGACTCACAAACTAACAGGAGTGAAAAGAAGAGGAGGGGGCTGTGATTGTGGAGACTGAGCTGAGCTTTAATGTTTACGAGAGCACTACTGCAGTACTACATCATAACATTTGTGTTATCAATTCATACTCCTCCTCACATGAATGAACACAGATCCTGCCTTAAAAACTACAGGAACAAGAGGTGTAAAATGTGGGTAAATGGCTCCGTCTGGGGACTGTGATGGGAACTGCACCCAACCTCATCGTTGTGGGATTGGTCATTCATTGATCATTAGGAAGTACTGTGAGGAGgatcaataaataaacctgcaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002331 False 1340 mRNA 0.50 2 11688609 11693910
TU153608 True 1715 TUCP 0.48 2 11688600 11694165

Neighbor

gene id symbol gene type direction distance location
AMCG00002324 zbtb17 coding upstream 43816 11636813 ~ 11644784 (+)
AMCG00002325 NA coding upstream 60259 11623781 ~ 11628341 (+)
AMCG00002323 NA coding upstream 76365 11602210 ~ 11612235 (+)
AMCG00002316 NA coding upstream 100706 11565009 ~ 11587894 (+)
AMCG00002314 NA coding upstream 282136 11392955 ~ 11406464 (+)
AMCG00002329 NA coding downstream 37440 11731605 ~ 11738113 (+)
AMCG00002332 NA coding downstream 44159 11738324 ~ 11741047 (+)
AMCG00002330 NA coding downstream 57486 11751651 ~ 11766591 (+)
AMCG00002343 NA coding downstream 97249 11791414 ~ 11792870 (+)
AMCG00002340 NA coding downstream 99455 11793620 ~ 11797734 (+)
G122501 NA non-coding upstream 2282 11685432 ~ 11686318 (+)
G122478 NA non-coding upstream 144979 11543104 ~ 11543621 (+)
G122471 NA non-coding upstream 155140 11530886 ~ 11533460 (+)
G122470 NA non-coding upstream 160502 11525232 ~ 11528098 (+)
G122469 NA non-coding upstream 164978 11523227 ~ 11523622 (+)
G122549 NA non-coding downstream 22190 11716355 ~ 11716701 (+)
G122592 NA non-coding downstream 162313 11856478 ~ 11857326 (+)
G122737 NA non-coding downstream 410505 12104670 ~ 12105523 (+)
G122743 NA non-coding downstream 434215 12128380 ~ 12129678 (+)
G122744 NA non-coding downstream 435713 12129878 ~ 12130747 (+)
G122482 NA other upstream 57708 11629012 ~ 11630892 (+)
AMCG00002311 ttll10 other upstream 309032 11365614 ~ 11379568 (+)
AMCG00002310 NA other upstream 328760 11357552 ~ 11359840 (+)
AMCG00002296 NA other upstream 934707 10714799 ~ 10753893 (+)
AMCG00002294 rere other upstream 1083761 10567912 ~ 10604839 (+)
AMCG00002339 NA other downstream 16285 11710450 ~ 11715372 (+)
G122582 NA other downstream 141274 11835439 ~ 11836169 (+)
AMCG00002355 NA other downstream 200308 11894473 ~ 11898701 (+)
AMCG00002360 NA other downstream 317806 12011971 ~ 12016084 (+)
G122746 NA other downstream 439621 12133786 ~ 12140465 (+)

Expression


Co-expression Network