AMCG00002337


Basic Information

Item Value
gene id AMCG00002337
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 11773596 ~ 11783638 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002337
ATGTATGACTTGGGGGAGGCTGTGAGCAGCTGTGTCCGGGAGCTGATGTTTGACAGCACCGGTGACGgcgacagtgacagtgacagtgcgGTGCCGTGGCGTGTGGCCTTGACCTATGTTGGGGCTGTGTTGAGCGCCgggctcctgctgctgctgttccaTTGGTACCCCCGTCTGGCACTGCGCATCCGCTGCCAGCCCTGCCCACTGGGGCTCGCCACCCTGCTGCTGGTCACTgaCAGCCATGGTCAGCAGTCAATAGTAGAGGTCATGacagaggaggtggaggagggaaGCCTGGAGCAGACTGGGGCAGAGGAGGATGAGTGGAGAGACACTGTGCAACTGCACACAGAGGAGagGAGTGTGCTGCGGTTCTATGTGTTCGAGGGCCAGCGCTATGTGTGGTTGTCCAGGAAGGGGGCCTTCTGCCCAGTCAGtgttCTGAACGAGGGGTGGACATGTGCGGAGTTGCATGGCCGGAGGGGGGGCCTGAGCCACGAGGAGCAGAGCGCCAAgaggaCACTGTATGGACAGAACCTAATTGATGTGCCAGTGAAGTCCTACATGAggctgctgctggaggaggTGCTGAACCCATTCTATGTGTTCCAGCTGTTCAGTGTGGTGCTGTGGCTATTTGATCACTATTATTACTATGCTGGCTGCATCCTGCTCATCTCACTGGCCTCCATCGCCCTCACTCTGTACGAGACACGCAAGGAGGTGCTGAGCTCGGAGCAGCTGGTCCCTGGGGACTGTGTGCTGCTGCCCCCTGACGGGCTGCTGCTGCCCTGCGATGCTGTCCTGTTGGAGGGGGAGTGCATGGTCAATGAGAGCATGCTGACAGGGGAGAGTGTTCCAGTGATGAAGACGGCGGTGACAAGGGGGGAGCAGCAGTACTGCCCTGATGCTCACCGTCGCCACACGCTGTTCTGCGGCACTCAGCTCATCCAGACCAAGGGGCGGGGAATCGTCATTGTCACCCGCACAGgtttCTGCACAGCAAAGGGAGACCTGGTCAGCTCCATCCTGCACCCCCAGCCAATCAGCTTCCGCTTCTACAGTGATGCCATGAAGTTCCTCATCGTCCTGGGAGTGCTAGCTCTGATTGGGACTGTCTACAGTGTGGTGATCCTCGTGCAATCCAATGTAACGGTGATGGAGCTGGTGGTCCGCTCCTTGGACATTGTGACCATCATTGTCCCCCCCGCACTGCCCGCTGCCTTGACGACGGGCATGCTGTACGCACAAAGCCGGCTGAAGCAGCACGGGGTGTTCTGTGTCAGCCCCCCCCGCATCACTGTAAGCGGCAAGGCTAGCGTGATCTGCTTCGACAAGacgGGTACTCTGACTGAGGAGGGTCTGGACGTGTGGGGGGTGTTGCCCAGGGATGGGGGAGGGTTTGGGGAACTGGTCCCAGACCCCCGGCTGCTGCCCCCAGGCCCCCTCCTCTGGGTAATGGCCAGTTGCCACTCTGTGTGCCTGCTGGGGGGGCAGCCCCTGGGCGACCCCCTTGATCTCAAGATGATTGAGTCCACAGGCTGGGAGCTGGTGGAGTCGGCAGGGGAGGGTGAGCCCGGGACGGACCTGACCATGATGAAGCCCCCTGCCTTCGAGCAGCAGCCCCAGGGAATCatGCTCAGTGAGCCCCTGCTGATAGTGCGCAGGTTTCCCTTCTCCTCGGCCCTCCAGAGGATGAGTGTGGTAGTGCGTCCAAAAGGGGGGCACGGTGCCCAGACCCTGCTCAAGGGGGCTCCAGAGACTGTGGCCAGCCTGGTGCTAGCGCTGGCACACCGGCCACTGGAGCTCAGTGACTCCGAGCTGCAGGTCATGGAAAGGGAGGCAGTGGAGAGTGAGCTGCAGTTCCTCGGCTTCCTGGTGATGCGGAACCTGCTGAAGCCGGAGACGGCACCAGTCATTACCACCCTGCGCTCTGCCTGCCTGCGCACTGTCATGGCAACAGGTGACAACATCCTGACTGCGGTGAACGTGGCGAGGGGGTGTGGGATGGTGGGGGGTGGTGAGAGGGTAATCTTTGTCCATGCCACTCCCCCGCTAGGCCCCACTCCCCCCATACTCCGATTCGTGCTGGAGTCCGAGGATGGCGCccaggggggcactgaggcacTGCCGCAGGGGCTGTACCAGCAGGGGGGTGGGAGCTACCATCTGGCCCTGACTGGGGATCACAGGGTTCTGATGTGTGGAGACGGGGCCAATGACTGTGGGGCTTTGCGGGCAGCAGATGTGGGCGTGTCCCTGTCGGAGGCGGATGAGGGTCGCTGTTCTCTGGTGACGTCATTCGCTCTGTTTAAGTACATGGCTCTGTACAGCATCATCCAGTACAGCTCCGTCCTCATCCTGTACACTgtaAAGACTAACCTGAGTGACCTGCAGTTCCTGCTGATTGACCTGGGGATAGTGACGTCCCTGGCGATAGTGATGGGGCGGGGTGGCCCTGCGCAGACGCTGACGCCTGCCCGCCCCCCCGCCCGCCTGCTGTCTATGACTGTGCTGGGAAGCCTTTTCCTGCACaccgtcctcctcctcctcacacaGACCAGCGCCCTGCTCATCACACAGGCACAGGACTgGTTCGTGCCCCTCAATGCCACGGTGGTGGTGGGTGCGGGGAACCTGCCCAATGCAGAGAACACTGCGCTGTTCAGCGTGTCGGGGCTGCAGTACCTCACCATGGCCGCTTCCAAGAAGCTGTACAAGAGGCTGGACCTGTCCTTGAGAGAGCAGCCTGACTGGCCCCCCCTGGACCAGCCCCTCCTCACCCCCCCCGGCACCACCATCAACCTCAGCTAG

Function

GO: NA

KEGG:

id description
K13526 ATP13A2; cation-transporting P-type ATPase 13A2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002337 True 2817 mRNA 0.62 25 11773596 11783638

Neighbor

gene id symbol gene type direction distance location
AMCG00002338 NA coding downstream 1451 11767284 ~ 11772145 (-)
AMCG00002336 fbxo42,LOC107573139,LOC106565130 coding downstream 47645 11720216 ~ 11725951 (-)
AMCG00002335 NA coding downstream 62285 11708258 ~ 11711311 (-)
AMCG00002334 NA coding downstream 67901 11703336 ~ 11705695 (-)
AMCG00002333 NA coding downstream 72919 11694337 ~ 11700677 (-)
AMCG00002348 LOC106928075,LOC100705239,LOC102211954,LOC103467007,LOC107092894,LOC101478036,LOC106947826,LOC105927147,LOC103150475 coding upstream 3864 11787502 ~ 11790736 (-)
AMCG00002346 NA coding upstream 16803 11800441 ~ 11803744 (-)
AMCG00002352 NA coding upstream 20416 11804054 ~ 11805639 (-)
AMCG00002347 NA coding upstream 31689 11815327 ~ 11821431 (-)
AMCG00002349 NA coding upstream 46834 11830472 ~ 11833823 (-)
G122551 NA non-coding downstream 54627 11718530 ~ 11718969 (-)
G122548 NA non-coding downstream 57451 11714409 ~ 11716145 (-)
G122530 NA non-coding downstream 145161 11601972 ~ 11628435 (-)
G122438 NA non-coding downstream 323805 11449566 ~ 11449791 (-)
G122432 NA non-coding downstream 364010 11407524 ~ 11409586 (-)
G122632 NA non-coding upstream 60754 11844392 ~ 11845671 (-)
G122633 NA non-coding upstream 63443 11847081 ~ 11848192 (-)
G122636 NA non-coding upstream 73753 11857391 ~ 11859325 (-)
G122621 NA non-coding upstream 79265 11862903 ~ 11864056 (-)
G122726 NA non-coding upstream 259677 12043315 ~ 12045019 (-)
G122597 NA other downstream 39272 11731617 ~ 11734324 (-)
AMCG00002327 spen,LOC108414948,LOC106565133,LOC107591084,LOC107737540 other downstream 88507 11647911 ~ 11685089 (-)
AMCG00002317 plekhm2 other downstream 245678 11514000 ~ 11527918 (-)
AMCG00002301 NA other downstream 926395 10837804 ~ 10847201 (-)
AMCG00002288 NA other downstream 1493612 10269889 ~ 10279984 (-)
AMCG00002350 tmem240a,tmem240,LOC107687438,LOC108275582,LOC105898995,LOC107593924,LOC107673083 other upstream 64832 11848470 ~ 11854891 (-)
AMCG00002351 NA other upstream 85969 11869607 ~ 11872862 (-)
AMCG00002368 rbm24b,rbm24,rbm24a,LOC106596654,LOC107601977,LOC106517771,LOC105905339 other upstream 212190 11995828 ~ 12006352 (-)
G122862 NA other upstream 1244559 13028197 ~ 13029406 (-)
AMCG00002421 sec61b,LOC102796100 other upstream 1865589 13649227 ~ 13654247 (-)

Expression


Co-expression Network