AMCG00002344


Basic Information

Item Value
gene id AMCG00002344
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 11837860 ~ 11845019 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002344
ATGGACCGGGCCGGAGAACCAGATGAGCAGGCCGGCGGTGCAGgtgCTGCTGTTGGTGTGACTGGAGAGGGAACTCCAGCAGAGAGTGGGTGTGTCACGGGGCTCTCCGAGGCTGTGATTGGGCGGCTGCTCAGTGAGCCAGGTCGCTTTGCGTATGCAGCACTGTGCGGTGGGGCTCTGGGGCAGCTCTTCCCTGGAGATGAGCACAGgcaGTTCCGCAGTCACACTGTATGCTCTCTGGTGAGCTGGCTGGGCCTCAGTGACAGTGTGCTGCCAGTGATGGAGGCGTTTGCGGTGGGACTGGGGTGGGAGGGCGCCGACACATTCCTGTCCATTCTGCAGAGGGAGCCACTGCTGCAGGGGGGCGCTCAAATCCTCACACAGGACCTGGTGTCATTCTCTGTGAAGGACGggttcTATGATGCTCGATCCCGGGTTCTGGTCCAGCACATCAGATGCCTACTCAGGGTGTCACCACAGCAGCTGGAGGAggaggagGAGTGTCGACGGCGCAGGAAGGAGAGGGGCAGGAAATGGCGTCGCTATCTCCTGATTGGCCTAGCCACTGTGGGTGGGGGCACTGTGATTGGGGCGGGTGCCGTGCTGGGCGCGGGGGGGGCAGCAGTTCTGGGCTCCGTTACAGGAATTGCCATCATGACATCACTGTTTGGGGCTGCAGGGGCGGGGCTCACCGGGTATAAGATGAGTAAGCGCTACTGCCTGTGCTGGGAGTCCAAGTATCTGTTGGCTCTGGGCAGTGCGCTGGGCTCCCTCCTGGACGGGTTGGTCAGCATGATGGCTCAGGAAGCATTGAAATACACAGTGCTGTCAGGGATCATGACTGCGCTGATGTGGCCCGCCTCCCTACTGGCTGTGGCCAGTGTGATTGACAACCCGTGGGGGGTATGTCTGAGCCGCTCTGCAGAGGTGGGGAAACACCTGGCGCAGGTACTGAGGAGTCGGCAGCAGGGACGGCGGCCGGTCAGTCTGATTGGCTTCAGTCTGGGGGCACGGGTCATCTACTTCTGCCTGCAGGAGCTTGCCAAAGAGACAGgctGCGAGGGTATAGTGGAAGACGCTATACTTCTGGGAGCACCAGTGGAAGGCTCTGTGCGGGAGTGGAGCCGACTGACCAGAGTGGTGTCCGGCCGGATCATCAACGGCTACTGCAGGGGGGACTGGCTCCTGGGCTTTGTATACCGCAGTTCGTCAGCCAGACTGTCCGTCGCAGGGCTCCAGCCAATCAACTTAGATGACCGGCGCATGATtaatgtagatttgtcttctgtgTCAGGGGAGCACAAGCAGCATGAGCTGGGACTCTCAGCTGTGGGGGATCAAGAAGACGGGGTTACTGGAGGAGCAGCGGGGGCATCTGGAGTGGGCAGGGCATCTGAGGTGGAGGCAGGGTCTCACTGCGGATCAGGTAGAAGTGGTGTGACCGTCCAGAGACAGCTGTCCATCACAGAGACCGAGGGGGAGGCCCTGGAGTGCGGGGGGGGAGGCTGGGACATCCCTGACATTTCTGACCTGTTGGACTGCCTGGATGAGGAGGATTCCACTCTCCCTTTGCTATCGGGCAGCATTGTGGGCACACCTGAGCACACTAGCCCCCACCAGGACCTGTGTacccacaccacaccacacactCACCAGCAGGGAGTGCTGTCACCCGGCAGCACAGAGCCCATAGAGCCCACAGAGCCCACATCCCAAAGGGAGCTTACTTGCTGTAGTACCACTGACACACACCGGGGGGAGCTCACTGCCAGCACTACAGTACACACGCACCAGGAATGTTGtaccacacacagacagcaggggGCAGCACATGACTCCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002344 True 1842 mRNA 0.61 14 11837860 11845019

Neighbor

gene id symbol gene type direction distance location
AMCG00002342 atad3a,LOC103357928 coding upstream 24220 11805698 ~ 11813640 (+)
AMCG00002341 NA coding upstream 37353 11798284 ~ 11800507 (+)
AMCG00002340 NA coding upstream 40126 11793620 ~ 11797734 (+)
AMCG00002343 NA coding upstream 44990 11791414 ~ 11792870 (+)
AMCG00002330 NA coding upstream 71269 11751651 ~ 11766591 (+)
AMCG00002354 NA coding downstream 59854 11904873 ~ 11905805 (+)
AMCG00002353 NA coding downstream 74647 11919666 ~ 11922866 (+)
AMCG00002356 NA coding downstream 88606 11933625 ~ 11959805 (+)
AMCG00002362 NA coding downstream 122356 11967375 ~ 11983436 (+)
AMCG00002364 NA coding downstream 145938 11990957 ~ 11992957 (+)
G122549 NA non-coding upstream 121159 11716355 ~ 11716701 (+)
G122501 NA non-coding upstream 151542 11685432 ~ 11686318 (+)
G122478 NA non-coding upstream 294239 11543104 ~ 11543621 (+)
G122471 NA non-coding upstream 304400 11530886 ~ 11533460 (+)
G122470 NA non-coding upstream 309762 11525232 ~ 11528098 (+)
G122592 NA non-coding downstream 11459 11856478 ~ 11857326 (+)
G122737 NA non-coding downstream 259651 12104670 ~ 12105523 (+)
G122743 NA non-coding downstream 283361 12128380 ~ 12129678 (+)
G122744 NA non-coding downstream 284859 12129878 ~ 12130747 (+)
G122829 NA non-coding downstream 527782 12372801 ~ 12373031 (+)
G122582 NA other upstream 1691 11835439 ~ 11836169 (+)
AMCG00002339 NA other upstream 122488 11710450 ~ 11715372 (+)
AMCG00002331 NA other upstream 143695 11688600 ~ 11694165 (+)
G122482 NA other upstream 206968 11629012 ~ 11630892 (+)
AMCG00002311 ttll10 other upstream 458292 11365614 ~ 11379568 (+)
AMCG00002355 NA other downstream 49454 11894473 ~ 11898701 (+)
AMCG00002360 NA other downstream 166952 12011971 ~ 12016084 (+)
G122746 NA other downstream 288767 12133786 ~ 12140465 (+)
AMCG00002390 NA other downstream 1186740 13031759 ~ 13051971 (+)
AMCG00002388 NA other downstream 1199674 13044693 ~ 13070832 (+)

Expression


Co-expression Network