AMCG00002349


Basic Information

Item Value
gene id AMCG00002349
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 11830472 ~ 11833823 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002349
AACCAATAAAGCGACCTGCGACTGTCAGCAGTGCGCTTCCCCCCCTCTGTTCGGGCCGGTGCCGCTCCGGTCCAGCTGCAAAACAGCTTGAAAGAGGGACAGTTAGTTTCAGCCACTCCAGTTCGAGCAGGGCATCTGTCCGCCCGAGCCAGTGCTGACGGATCGGTACCGGGACCAGCGCTCCCAACTCCGTCGAATCCAGATCCTCGACTGATCCCCTAACGGGCCAGTACTGATACACAGCAGCCTCGGTAGACGGGGATTTCATCGCAGCGCAGGCATCCCTGCAGCCGGACCTGTCTTACTGGACCGAGAGTCGgtGACACCGCAGTGATGTGTGACTCTCAATGGGAGTGTGATGGTGACAGTGGGGCAGAGGGCGAGCAGAGCAGTGCACGGGCATGGCTGCTACCCCCCCCGCCGGCGTACAGGCTGGGCTCCCCGGGGCTCCCACGTGCGCGCCGGGGGAGGGTGGCGTGCTTGGTGTGGGGGGCAGGGCTGGTGCTGCTGAACGGGCTGGTGTGTGTGGGCGGGCTGGTGCTCCTGGGTGTCGTGTTCTCTCTTGTCCTGCTGCCCGCTGCCGCCCTGCTGACCATCGGCTTCCAGTGCCACTCACGGGTACTGCACTCTCAACAGCAGTACTGTGTGTCTCTGCTAGATGATAACTCCTCCTCCGCGCTCATCATCCTGGGTTTCGTGATGATGTCACCACTCCTCGTGGTCGCCATGGTCATCTATTGCAGCCTGGCTCGGCGGCTCCGCCTCTTCCGTCTGTTCCAGCCCTGTGCACGTGCTCTGTACAGCGGGGGGAGCTGGCGCGGGTGCGAGGAGTATGGGGGAGctgAGGTCATTAAAGAGCTGCTCTACGACACACACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002349 True 879 mRNA 0.63 4 11830472 11833823

Neighbor

gene id symbol gene type direction distance location
AMCG00002347 NA coding downstream 9041 11815327 ~ 11821431 (-)
AMCG00002352 NA coding downstream 24833 11804054 ~ 11805639 (-)
AMCG00002346 NA coding downstream 26728 11800441 ~ 11803744 (-)
AMCG00002348 LOC106928075,LOC100705239,LOC102211954,LOC103467007,LOC107092894,LOC101478036,LOC106947826,LOC105927147,LOC103150475 coding downstream 39736 11787502 ~ 11790736 (-)
AMCG00002337 NA coding downstream 46834 11773596 ~ 11783638 (-)
AMCG00002345 NA coding upstream 30791 11864614 ~ 11869352 (-)
AMCG00002357 capzb,LOC106583096,LOC106565651,LOC105897928 coding upstream 48250 11882073 ~ 11892699 (-)
AMCG00002358 NA coding upstream 72087 11905910 ~ 11913015 (-)
AMCG00002359 NA coding upstream 79287 11913110 ~ 11918100 (-)
AMCG00002367 NA coding upstream 221818 12055641 ~ 12060552 (-)
G122551 NA non-coding downstream 111503 11718530 ~ 11718969 (-)
G122548 NA non-coding downstream 114327 11714409 ~ 11716145 (-)
G122530 NA non-coding downstream 202037 11601972 ~ 11628435 (-)
G122438 NA non-coding downstream 380681 11449566 ~ 11449791 (-)
G122432 NA non-coding downstream 420886 11407524 ~ 11409586 (-)
G122632 NA non-coding upstream 10569 11844392 ~ 11845671 (-)
G122633 NA non-coding upstream 13258 11847081 ~ 11848192 (-)
G122636 NA non-coding upstream 23568 11857391 ~ 11859325 (-)
G122621 NA non-coding upstream 29080 11862903 ~ 11864056 (-)
G122726 NA non-coding upstream 209492 12043315 ~ 12045019 (-)
G122597 NA other downstream 96148 11731617 ~ 11734324 (-)
AMCG00002327 spen,LOC108414948,LOC106565133,LOC107591084,LOC107737540 other downstream 145383 11647911 ~ 11685089 (-)
AMCG00002317 plekhm2 other downstream 302554 11514000 ~ 11527918 (-)
AMCG00002301 NA other downstream 983271 10837804 ~ 10847201 (-)
AMCG00002288 NA other downstream 1550488 10269889 ~ 10279984 (-)
AMCG00002350 tmem240a,tmem240,LOC107687438,LOC108275582,LOC105898995,LOC107593924,LOC107673083 other upstream 14647 11848470 ~ 11854891 (-)
AMCG00002351 NA other upstream 35784 11869607 ~ 11872862 (-)
AMCG00002368 rbm24b,rbm24,rbm24a,LOC106596654,LOC107601977,LOC106517771,LOC105905339 other upstream 162005 11995828 ~ 12006352 (-)
G122862 NA other upstream 1194374 13028197 ~ 13029406 (-)
AMCG00002421 sec61b,LOC102796100 other upstream 1815404 13649227 ~ 13654247 (-)

Expression


Co-expression Network