AMCG00002352


Basic Information

Item Value
gene id AMCG00002352
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 11804054 ~ 11805639 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002352
ATGCTGCTGTGGGTGTGGTGGCGTTCAGTGGGCTGTTGGTCCACACTGGGCCTGAGTGTCTTCCACTGTGTGACCCTGCGCCGCCGAGGCTTCGTGACAGGGGAGTTGGCTCAGGGGCGGGGTCAGCGCCGTGTGGTGGGAGCACTAGTGCTGGTGTGGGGCATCAACCTGGCCTGCTCGCTGCCCGCCCTCGTCTACACCACGTATGACAGCAGCAACGCTAGCGTGGAGCTCATGGTGATCAGCTGCACCATGCGTCCCCTGCTGGGTTGTGTGTGGGAGTTTCCCTCCAAGGCCCAGGGCACCGCCTTTGCCACCAGCTCCCTGGTGCTGAATGAGTTGTTGCCACTGCTGCTCATGGTGGGTGCCAACTGCGCCACACTGGCCGCCCTCCACAGGCACATCCACAGTGTCACAGGAGCCAGAgttgagggtgggggggaggcgCAAGTGATGGCGGAGAGGCGTGCAGCACGAGTCATCATGGTGGTGGTGTTTCTATTCGTGGTGTGCTGGGTGCTGCAGGTGACAGCTGTCACGTACTACAACTACTTTGGCGGGCACCACGCCCCTGCCCTGCTCACGCTGGCCCAGTTCTCCGCATCTGTGTTTGTGGGCTTCTGCCCCTTGGTGGTGGCGCTGGGACATAGCAAGCTTCGTCGCAGTCTAATGGACATGGTCAGGCTGGGCAGCTGGGGCAGGAACTGGAGCTGTTGCCAAGGGAACAAGCAGCAGGTGGGGCaagagggagggggaagggCCAGGGGAAAGGACAGGGTGGTGGCGGTGAAGACGGTAAAGAGACTGCGACAGGACTATGTCTCTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002352 True 828 mRNA 0.62 2 11804054 11805639

Neighbor

gene id symbol gene type direction distance location
AMCG00002346 NA coding downstream 310 11800441 ~ 11803744 (-)
AMCG00002348 LOC106928075,LOC100705239,LOC102211954,LOC103467007,LOC107092894,LOC101478036,LOC106947826,LOC105927147,LOC103150475 coding downstream 13318 11787502 ~ 11790736 (-)
AMCG00002337 NA coding downstream 20416 11773596 ~ 11783638 (-)
AMCG00002338 NA coding downstream 31909 11767284 ~ 11772145 (-)
AMCG00002336 fbxo42,LOC107573139,LOC106565130 coding downstream 78103 11720216 ~ 11725951 (-)
AMCG00002347 NA coding upstream 9688 11815327 ~ 11821431 (-)
AMCG00002349 NA coding upstream 24833 11830472 ~ 11833823 (-)
AMCG00002345 NA coding upstream 58975 11864614 ~ 11869352 (-)
AMCG00002357 capzb,LOC106583096,LOC106565651,LOC105897928 coding upstream 76434 11882073 ~ 11892699 (-)
AMCG00002358 NA coding upstream 100271 11905910 ~ 11913015 (-)
G122551 NA non-coding downstream 85085 11718530 ~ 11718969 (-)
G122548 NA non-coding downstream 87909 11714409 ~ 11716145 (-)
G122530 NA non-coding downstream 175619 11601972 ~ 11628435 (-)
G122438 NA non-coding downstream 354263 11449566 ~ 11449791 (-)
G122432 NA non-coding downstream 394468 11407524 ~ 11409586 (-)
G122632 NA non-coding upstream 38753 11844392 ~ 11845671 (-)
G122633 NA non-coding upstream 41442 11847081 ~ 11848192 (-)
G122636 NA non-coding upstream 51752 11857391 ~ 11859325 (-)
G122621 NA non-coding upstream 57264 11862903 ~ 11864056 (-)
G122726 NA non-coding upstream 237676 12043315 ~ 12045019 (-)
G122597 NA other downstream 69730 11731617 ~ 11734324 (-)
AMCG00002327 spen,LOC108414948,LOC106565133,LOC107591084,LOC107737540 other downstream 118965 11647911 ~ 11685089 (-)
AMCG00002317 plekhm2 other downstream 276136 11514000 ~ 11527918 (-)
AMCG00002301 NA other downstream 956853 10837804 ~ 10847201 (-)
AMCG00002288 NA other downstream 1524070 10269889 ~ 10279984 (-)
AMCG00002350 tmem240a,tmem240,LOC107687438,LOC108275582,LOC105898995,LOC107593924,LOC107673083 other upstream 42831 11848470 ~ 11854891 (-)
AMCG00002351 NA other upstream 63968 11869607 ~ 11872862 (-)
AMCG00002368 rbm24b,rbm24,rbm24a,LOC106596654,LOC107601977,LOC106517771,LOC105905339 other upstream 190189 11995828 ~ 12006352 (-)
G122862 NA other upstream 1222558 13028197 ~ 13029406 (-)
AMCG00002421 sec61b,LOC102796100 other upstream 1843588 13649227 ~ 13654247 (-)

Expression


Co-expression Network