Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00002354 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 11904873 ~ 11905805 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0060876 | semicircular canal formation | biological_process |
| id | description |
|---|---|
| K19558 | NBL1; neuroblastoma suppressor of tumorigenicity 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00002354 | True | 558 | mRNA | 0.65 | 3 | 11904873 | 11905805 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002344 | NA | coding | upstream | 59854 | 11837860 ~ 11845019 (+) |
| AMCG00002342 | atad3a,LOC103357928 | coding | upstream | 91233 | 11805698 ~ 11813640 (+) |
| AMCG00002341 | NA | coding | upstream | 104366 | 11798284 ~ 11800507 (+) |
| AMCG00002340 | NA | coding | upstream | 107139 | 11793620 ~ 11797734 (+) |
| AMCG00002343 | NA | coding | upstream | 112003 | 11791414 ~ 11792870 (+) |
| AMCG00002353 | NA | coding | downstream | 13861 | 11919666 ~ 11922866 (+) |
| AMCG00002356 | NA | coding | downstream | 27820 | 11933625 ~ 11959805 (+) |
| AMCG00002362 | NA | coding | downstream | 61570 | 11967375 ~ 11983436 (+) |
| AMCG00002364 | NA | coding | downstream | 85152 | 11990957 ~ 11992957 (+) |
| AMCG00002361 | NA | coding | downstream | 119197 | 12025002 ~ 12027049 (+) |
| G122592 | NA | non-coding | upstream | 47547 | 11856478 ~ 11857326 (+) |
| G122549 | NA | non-coding | upstream | 188172 | 11716355 ~ 11716701 (+) |
| G122501 | NA | non-coding | upstream | 218555 | 11685432 ~ 11686318 (+) |
| G122478 | NA | non-coding | upstream | 361252 | 11543104 ~ 11543621 (+) |
| G122471 | NA | non-coding | upstream | 371413 | 11530886 ~ 11533460 (+) |
| G122737 | NA | non-coding | downstream | 198865 | 12104670 ~ 12105523 (+) |
| G122743 | NA | non-coding | downstream | 222575 | 12128380 ~ 12129678 (+) |
| G122744 | NA | non-coding | downstream | 224073 | 12129878 ~ 12130747 (+) |
| G122829 | NA | non-coding | downstream | 466996 | 12372801 ~ 12373031 (+) |
| G122830 | NA | non-coding | downstream | 499137 | 12404942 ~ 12411141 (+) |
| AMCG00002355 | NA | other | upstream | 6172 | 11894473 ~ 11898701 (+) |
| G122582 | NA | other | upstream | 68704 | 11835439 ~ 11836169 (+) |
| AMCG00002339 | NA | other | upstream | 189501 | 11710450 ~ 11715372 (+) |
| AMCG00002331 | NA | other | upstream | 210708 | 11688600 ~ 11694165 (+) |
| G122482 | NA | other | upstream | 273981 | 11629012 ~ 11630892 (+) |
| AMCG00002360 | NA | other | downstream | 106166 | 12011971 ~ 12016084 (+) |
| G122746 | NA | other | downstream | 227981 | 12133786 ~ 12140465 (+) |
| AMCG00002390 | NA | other | downstream | 1125954 | 13031759 ~ 13051971 (+) |
| AMCG00002388 | NA | other | downstream | 1138888 | 13044693 ~ 13070832 (+) |
| AMCG00002393 | NA | other | downstream | 1219573 | 13125378 ~ 13129697 (+) |
