AMCG00002361


Basic Information

Item Value
gene id AMCG00002361
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 12025002 ~ 12027049 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002361
AAAGATGACTCTAAATGCATCCACGAGGCGGAGGAGTTTCTGTCTGCAGCCTCGGCAGCATCGCTGGAGTATTTCTACAGATGGGAATCTACTATCCAAAAACCCTGTGCTTTCATCTCATGTTGTACGCTCCACGTCGTATACCAACAGCAGCGACACTTGTAGGCAAAGGTGGTCATCTTCAGACTCGTCTTCAGACTCTTCAGATTCAGTCACTTCCGAGTCTGGCAGCAACCTCTACAGAGTTGTTTTAATTGGAGAGAACAGAGTTGGAAAGTCTACATTAGCCAACATTTTTGCTGGTGCCCAGGACAGCATGGACAGTGATGGTGTCCTATGTGgagaAAACACTTATGTGCAAACTCTGACAGTAGATGGAGAAAGCGCAACAATTACTTTATTGGATACGTGGGTTACTGAGGAGGAGGAAAGCTGGAGCCAAGAGCAGTGCATGCAGGCAGGAGACGCATACCTAATTGTATACTCAATCACTGACAGAGCGAGCTTTGAGAGAGCCTCCGAACTGCGAATCCAGCTGCGGAGAGCTAGGCAGGCAGAAGATATCCCCATCATCCTCGTTGGCAATAAGAGTGACCTTGTGAGATGCAGAGAAGTGTCAGTGACAGAAGGCAGAACATGTGCAGTGGTGTTTGACTGCAAGTTCATAGAGACATCAGCTGCCGTGCCGCACAATGTTCGGGAGATGTTTGAAGGCATTGTGCGTCAGATTCGTCTCCGGCGGGACAGCAAGGAAGACAACCAGAGGCGGATGGCGCTCAATAAGAGGAGGGAGAGTATTCCCAAGAAAGCCAAACGGTTCCTGGACAGAATTGTTGCCAAGAACAATCAGAACATGGCGTTCCGACTGAGATCCAAGTCTTGCCATGATCTTTCGGTGTTA

Function

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0016020 membrane cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG:

id description
K07846 GEM; GTP binding protein overexpressed in skeletal muscle

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002361 True 901 mRNA 0.49 4 12025002 12027049

Neighbor

gene id symbol gene type direction distance location
AMCG00002364 NA coding upstream 32045 11990957 ~ 11992957 (+)
AMCG00002362 NA coding upstream 41566 11967375 ~ 11983436 (+)
AMCG00002356 NA coding upstream 65197 11933625 ~ 11959805 (+)
AMCG00002353 NA coding upstream 102136 11919666 ~ 11922866 (+)
AMCG00002354 NA coding upstream 119197 11904873 ~ 11905805 (+)
AMCG00002363 NA coding downstream 2935 12029984 ~ 12045017 (+)
AMCG00002366 fam92a1,LOC103394454 coding downstream 19753 12046802 ~ 12051713 (+)
AMCG00002365 NA coding downstream 33707 12060756 ~ 12075382 (+)
AMCG00002369 pdp1 coding downstream 52914 12079963 ~ 12081582 (+)
AMCG00002370 NA coding downstream 54577 12081626 ~ 12087824 (+)
G122592 NA non-coding upstream 167676 11856478 ~ 11857326 (+)
G122549 NA non-coding upstream 308301 11716355 ~ 11716701 (+)
G122501 NA non-coding upstream 338684 11685432 ~ 11686318 (+)
G122478 NA non-coding upstream 481381 11543104 ~ 11543621 (+)
G122471 NA non-coding upstream 491542 11530886 ~ 11533460 (+)
G122737 NA non-coding downstream 77621 12104670 ~ 12105523 (+)
G122743 NA non-coding downstream 101331 12128380 ~ 12129678 (+)
G122744 NA non-coding downstream 102829 12129878 ~ 12130747 (+)
G122829 NA non-coding downstream 345752 12372801 ~ 12373031 (+)
G122830 NA non-coding downstream 377893 12404942 ~ 12411141 (+)
AMCG00002360 NA other upstream 8918 12011971 ~ 12016084 (+)
AMCG00002355 NA other upstream 126301 11894473 ~ 11898701 (+)
G122582 NA other upstream 188833 11835439 ~ 11836169 (+)
AMCG00002339 NA other upstream 309630 11710450 ~ 11715372 (+)
AMCG00002331 NA other upstream 330837 11688600 ~ 11694165 (+)
G122746 NA other downstream 106737 12133786 ~ 12140465 (+)
AMCG00002390 NA other downstream 1004710 13031759 ~ 13051971 (+)
AMCG00002388 NA other downstream 1017644 13044693 ~ 13070832 (+)
AMCG00002393 NA other downstream 1098329 13125378 ~ 13129697 (+)
AMCG00002437 pcbp3,LOC108266078,LOC107657516,LOC107728912 other downstream 2300583 14327632 ~ 14361536 (+)

Expression


Co-expression Network