AMCG00002366 (fam92a1,LOC103394454)


Basic Information

Item Value
gene id AMCG00002366
gene name fam92a1,LOC103394454
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 12046802 ~ 12051713 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002366
CGACGGCGTCATGGAGACGGCGTGCCGCTCCGTACGCTGCCCTTGACCGTGTAAACAGATGCGCGCCATCCGGGCCATTAGCAGCCATTTGTGATGCCTTTGCTTCGGTACTGAGGTCCAGACAACAGGAACCATGAGTCGCACTCCAGATGCCAGGGAAAGGGATAACCAGACCAAGCAGATCCAGGAGAACATCACCAATGTGGAGAAGCACTTTGGAGAGCTGTGCCAGCTGTTTGCTGCCTATGTCCGGAAGACAGCACGGCTGCGGGACAAGGCAGACCTCCTGGTGCGAGAAGTGAGCCTGTACGCTGACTCTGAAACACCAAATTTAAAGAGTGGATTGAAACATTTCGCTGACCAACTTGCTAAAATTCAGGATTATCGTCAAGCAGAGgtggAAAGACTTGAAGCTAAAGTTATAGAGCCGTTGAAAAGCTATGGTACACTTGTGAAGCTCAAAAGGGATGACCTCAAAGCAACGATGAGTGCAAGGAATCGAGAAGCCAAGCAAATGCAACAGCTGGAAAGAACGAGGCAGCGGAACCCCTCGGATCGCCAGATAATCGTATCCTTTCCTTCGGCATCGGCCGAGACTGAACTCCAGAGAGCAACGATCGATGCCACTCGCACAACACGGCAGCTGGAGGAAACCATTGATGACTTCGAGAGGAAAAAAATACGAGACATCAAGAAAGTCTTTGGCGATTTTGTGACCGTGGAAATGACGTTCCATGCGAAAGCTTTGGAAGTCTACACGACTGCTTTCCAGCACATACAGAGTGTAGACGAGGAAGAGGATCTCGAGGTTTTCAGGAGCTCGCTGCACCCGCCAGATCAGCAGTCTCGGATAGAAATCGTGCGTGCGAATTCCAAAACGTCACTCAGCCGGACTGGGTCAACAAAGAATAACTCGGGGACCTTACAGCAACAGACGCCGACCTGGAAAAGGGCAGTTGaagacgaggaggaggaagaagaggaggaggaggaagctgATGAGGATGACCTGGAAGATGTCACCGAGGATGAAAATTAATTCCCAGCCTTATCTTAACACTAATGTCTTaccaattgcattttaattaatgttaatcaGTATTTCTTACATATTTATGTGCACTTTGTtggaaatcaataaaatacttattataGTAACTATGAACa

Function

NR:

description
PREDICTED: protein FAM92A1 isoform X1

GO: NA

KEGG:

id description
K23868 FAM92; protein FAM92

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002366 True 1167 mRNA 0.49 8 12046802 12051713

Neighbor

gene id symbol gene type direction distance location
AMCG00002363 NA coding upstream 1785 12029984 ~ 12045017 (+)
AMCG00002361 NA coding upstream 19753 12025002 ~ 12027049 (+)
AMCG00002364 NA coding upstream 53845 11990957 ~ 11992957 (+)
AMCG00002362 NA coding upstream 63366 11967375 ~ 11983436 (+)
AMCG00002356 NA coding upstream 86997 11933625 ~ 11959805 (+)
AMCG00002365 NA coding downstream 9043 12060756 ~ 12075382 (+)
AMCG00002369 pdp1 coding downstream 28250 12079963 ~ 12081582 (+)
AMCG00002370 NA coding downstream 29913 12081626 ~ 12087824 (+)
AMCG00002372 NA coding downstream 50093 12101806 ~ 12104566 (+)
AMCG00002371 ptpn23,LOC106597002,LOC107591991 coding downstream 54476 12106189 ~ 12121777 (+)
G122592 NA non-coding upstream 189476 11856478 ~ 11857326 (+)
G122549 NA non-coding upstream 330101 11716355 ~ 11716701 (+)
G122501 NA non-coding upstream 360484 11685432 ~ 11686318 (+)
G122478 NA non-coding upstream 503181 11543104 ~ 11543621 (+)
G122471 NA non-coding upstream 513342 11530886 ~ 11533460 (+)
G122737 NA non-coding downstream 52957 12104670 ~ 12105523 (+)
G122743 NA non-coding downstream 76667 12128380 ~ 12129678 (+)
G122744 NA non-coding downstream 78165 12129878 ~ 12130747 (+)
G122829 NA non-coding downstream 321088 12372801 ~ 12373031 (+)
G122830 NA non-coding downstream 353229 12404942 ~ 12411141 (+)
AMCG00002360 NA other upstream 30718 12011971 ~ 12016084 (+)
AMCG00002355 NA other upstream 148101 11894473 ~ 11898701 (+)
G122582 NA other upstream 210633 11835439 ~ 11836169 (+)
AMCG00002339 NA other upstream 331430 11710450 ~ 11715372 (+)
AMCG00002331 NA other upstream 352637 11688600 ~ 11694165 (+)
G122746 NA other downstream 82073 12133786 ~ 12140465 (+)
AMCG00002390 NA other downstream 980046 13031759 ~ 13051971 (+)
AMCG00002388 NA other downstream 992980 13044693 ~ 13070832 (+)
AMCG00002393 NA other downstream 1073665 13125378 ~ 13129697 (+)
AMCG00002437 pcbp3,LOC108266078,LOC107657516,LOC107728912 other downstream 2275919 14327632 ~ 14361536 (+)

Expression


Co-expression Network