AMCG00002373 (LOC101076725,LOC106573767,LOC106598349,LOC106598644,LOC106597130)


Basic Information

Item Value
gene id AMCG00002373
gene name LOC101076725,LOC106573767,LOC106598349,LOC106598644,LOC106597130
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 12082111 ~ 12096642 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002373
CTGGGGGCGATCTGTATCAGGGCTCAACCACAAACTGGCAGAATGTGACACTGAAAACCTGACAAAGGAATGCAATGACAGATGGAGGGGTGCTGAAGGGGAATGAAGCACAGTAAatatggggagagagaaaggatgAAGAGGGGAGAGTGATAAAGGAGGGCAAGGAGAAAGGCATTGGATTTTCCACTGTGGATGGAGCAGGAAAGAGGAAGCCCTTTATTAACAGAAGCAGTTTGCAATATTAAGCCTGTTCTTTTGCAGTGAATCCGTTTGTGCAGACTTCCCTGACTTCAATGAGGCGAGAGTAACGAGCTGGGGCAGGTTGGGATGGTGTCCTGAAGACCTGTGTCGTTGTGGTCGCGAGTCTGGTGTCGGGAGCTGTCTTTCTTTCCAGCCTCCCAGTGCAGCAGGGCCAACACGGGCCTGGCTACCTGGGAGTCTGACCCGTGTCTGTGCACTGGGCTGGGGTCCGGGCCCGGAGATGTACGCCTTCTACTCTCTGCTCGTCTATATCTTCTACACGCTCTTCAAGAGGGAGGAGTCTGCGCAGGAAGAAGAAGGACCTTCTACACAGGAACCAGACATTGTCTCTGTGAGAACAAAGAGCTTGAGGGGGAAAAATGCCCCCCCACCAAGCATGCGAGAAGATGGCTGTAAAGGGCTGGAATACTCTGAGGGCAGCAGCTCTGACAGTGATGGCCTTTCTCTCAGTGAGGAAGACGAGTGTGACGACGAAGACCTGGAGGACAGTGCAGTCTCCCCCCTGGCTGCTTTCCTGTCCTTTAAACAGGAAGCTGAAGGAAGAAGAGTTTCACAGGCCCAGGCCGAAGCCAGCAGTGGAAAGGCAGCCGAGTCCCCGCTGCTGACGGTGATGTCCCACCTCCTGACCTTCTTGGAGCAGCATGCCCACATGACGCAGCTGCAGCAGCGTGCGCAACAGTACCGGGTCAGGCTGCAGCGGCACCGGGCCCAGCACCGCCGGCAGCTGCAGACCCTGAAAGCCTCCTACCGCCAGCGGCTGAGGGACCAGAGTCGAGTGATCGGGAGCCTGGAGGGGGTGATCACCGACCAGCAGGACCGGCTGAGCAGCATGCCGTCTGGTGGCCCCACCATGCCCCACCCGCCCCAAGACAGCCTTCACCAGCTGGTGCAGTCCCTGCGCAGTCTGCAGGGGGAGAAGAGCCGCATGCAGGGGGAGCTGCAGCGCCTGCACTCACAGCTGCAGCAGAGGGAGCAGGACAAGCAGCACACCACAAAGGACTTCCAGCAGCAGATTGAAGACTTGCAGCGCTGCATCGAGGAGCGTGAAGGTGAGCTGACACGGCTCAGGACAGAAACAGGAGTGACAGATTCTGAGAAGAGGATGTTCCGCTTGGCAGCTGAGAACGACAGTCTGAAGGAGAGTCTCAGCGTCACCCAGagcctcctgcagcagctgtccCTCGTGCCGTCTCAGTCCAGCACTGCGCTGATCAAGGAAAACGAGTCCCTGCGGAGCCGGGTCCTGCAGCTGGAGAGCTCCCTGCAGCATCGCGCAGAGCAGCTGTCCCGGCTGGAGAGAGACAGCGAACAGGCCgagtggaggaggagggacGAGATGTGCAGGCGGGATGACAGAGTGAGGCAGCTACAGCTGGATCTGGACAAGGAGAGGGGCCGGGAACCAGTGGTAAAGTACGTCACTAAGACGGTGGAAGTGGAGTCACCCGGGACTCTGAGGCTGTTGGCTGAGACGAGGGACATGAATAAGCGATTGGCTGAGGAGCTGTCCATTCAGAGCCAGAAATGCAGCCGCCTGGAGGAACAGATCAGGGCGTCAGAGGAAGTGACTGCTGGTCTGACGAAAAAgATTGTTGCCTATGAGTCTGAAATCGAGAAGCTAAGGGAGGACCTGCTGAAGGAGATCGGCCACCTGGAGGGAAGaaaggaggaggcagtgagAGAGGCGGCCGAGTGCTCCGAGCAGCACCTGCAGCACCTGAGGGAGCAGTTCACAGGTCTACAGAGCCGCCTGTCTGCCCTCCAGCCCGCTCTGCGCTCAGTGCAGGCCGACTACGGCAGTCTGCGCAGCCAGGTGCGCAGCTTTTCTGAGTTCTACGGGGCAGCAGTCAACGAAGCCAAGAAACAGTTATGTTCTGCAATCAGTGAGATGTCTGAGGCCAACAGAGACATcctacagaaatacagaaaggaaGTGGCTCTGCGCAGGAAGTACCATGAGCGACTGGTTGAACTTAAAGGCAACATCCGGGTCCTATGCCGTGTGAAGCCCGTCCTGTCTGAGGATCAGCAGGAAGAAGGACAAACCACAGCTGTGACAACCGACCCCAACAACGAATCCGCAGTGACCGTGCGGAGCAAAGGACGGGCGCGAGAGTTTGAGCTGGACAAAGTGTTTCAGCCTCAGGCTTCTCAGGATGAGgtTTTCCAGGAGATTGAACCCCTCGTGACTTCCTGCATTGATGGCtacaatgtgtgcatttttgCCTATGGACAGACTGGCTCTGGTAAAACCTACACTATGGAGGGAAGTGTTGAAAACCCTGGGATAAACCAAAGGGCTCTGAAGCACCTTTTCAGTGAGATGGAGGACAGGAAGGGGATGTGGGACTATGCTGTGACCCTCAGTTTAGTGGAGATCTACAACGAAGTGCTCAGAGATCTGCTCAGCAAGGATCCCGGGGAGAAGCTGGACATCAAGATCAGTCCTGACGGGACCGGGCAGCTCCATGTTCCTGGGCTGAGGGTCATTGAGGTCAAGAGCTTCCAGCACATCAAGAAAATTCTGGCTCTGGGTCGGAAGAACAGGATCACTTACAGCACCCAGATGAACCAGCACAGCTCTCGCTCACACGCCTTGCTCACCATCACAGTGACCGGCACTGACCTGGCCAGTGGAGCAAAGACTATAGGTAAGCTGAACTTAGTGGACCTGGCGGGTTCTGAGCGCGTGTGGAAGTCCGGGGCCGAAGGGGAGCGGCTGAAGGAGGCTCAGAACATTAATCTCTCCCTGCTGGCTCTGGGGGACGTCATCCAGGCATTGAGGGGCCGGCAGACCCACGTTCCCTTCAGGAACTCCAGGCTGACCTACTTGCTGCAAGACTCGCTGGGAAAGGGAAACAAGACTGCGATGGTAGTGCAGatCTCCTCGTTGGAGAGGAACGTGGGTGAGACCTTGTGCTCTCTGAAGTTTGCACAGAGAGTGTGTAAAGTGGAGCTGGGCCCTGCGTCACGTAAGATTGAGTCTGCAGGACACTGTGACTTTCTCTCTTAATCTGGTGACAGAGAAAGAGGGCAGAAGACGATTTCAAAAGTCAGTGACTCAACCCACTCCTCCAATTAAAGGGCTGAGTTTAGACGGGTCACTATAATGTGACTAGGATTTCAATCTTATTCTTACCATTTTCCAAacatattcaaatttaaatccAGAAATAGTGCCTGCAGCTCTTGGCTTGGCTTGGCTTGGGCAGATCTGCATGctaaacatttttcttcaacACACCTATGATGCTGTCTGTGACACGCCACTGGTTTTAAAGTTATCATTGGTATTATTACTAGACActcaaaatgttatttgaagAATTTcctaaacattaaaacaaaatatactccAGAGTATATAATTGGCTCTGTTCTTGAGATTGGCTTTGGATGGTGTGACAGACTTAAAACAGGATCCATGAAGTGGATATTTCTAATGTTAAACAGACACGTGTGCTTAATGTTCAATTAATACTGAAACAGAGATCCTGAAATAGGAGGAAGGCCAAATCTTCTCAATCCATTTTATTGACTGTAACTAACTAACAGAGGTGACTTCTGAACAAGCTGAACtaatttatttacacttttgttGTCTAGATGATTAGCATATTTGTGATCAGTCTCATCACCTTTCAGATTCAGAGCTTTGTTTAGCATGGGTGGTTACAAGTAAGATggactgtaatttatttaaccTGACAGatcaaacatgaaaacatgaattgATTCAGTAAAAgtgaattatacaaataattcatGTATATCAATGGGATTTCTGTTGATATAAGGGTGCATTAAACTGACTCAGGTAATTACAGAACTTAGCCTTACATCTGTTACTTGCAAAGTTGAGATTACGTCACTTTACACTACAAACATAAAGCCCAAACGCTTCATTTTATGCTGGAGTTCAGTTGCTAAATTTGCTGTGTTAAAGTCAACACGGGTTTGAAATTTGGCTGAACAAATTCAGTGATTTACATCCTGTCCTGTGAAGGAAATATTGATTAGATACGTGTAGCTgaagacaataataaataatctttaATAATCCTAACaggattttacataattggaatacatagaaaataatgtatttgattgacataaaacaataacacagcCACTCTATATAATTAACAATTTGATCTGTTCCGTACCTGCACGTGACTGTGGCATATAGACATGGAGAAGAGGGATGTGAAAACCATTGAGACTGACATGGTAATTTCAACATACAAACAGCAGCAAAACTGTGGGccataaaaacacagcaaaaaataattaatttatggGATTAATATTAACACTTTGCATGCTGGTTCTGAGAAAATGCACGGCCACAAGATTGCACTGCACCCAAAGGTCCTGATTATACTATTTTCAATTGCTCCTATTTTCGGTGAAATATCTTCTACTGACTTTTCTgctattaaaatacagaacttTCCTGTCCCTCTTcagttttacagtgttttgACTGTTGCCAGAAATGAGGTGTTACACTGCACTGAAGATTGCTCTTGTAAATAGGCCATGTTGGTTTAATGGTGGTTGTGTGCATCGTCTGATCCCCAGCATTCCTTCAGCTGAGCCATTTAAATGTCATTCAGCTCTGATCTGGAATTCAGAGGAGATTGTGCTTGTTATGTTATTTTCAGAACAGACAATGTGCTCTATGTTCTTatccaaaattatatattagtaGAACTATGTGCttaatgacatttttgtttttcatatctatttcattgttatttttttcagtaacGTCCTATAGATTATTCAATAATagtggattaaaataaatggattgtTCTTGAAAATATTCTATTCATTAATACTGTTGTACtattattcaattacatttaaagatgcAAACATATCCCAAACCCTTTTAGCTGGCCTAAAAACCTCTGATTGCACTGGCTGACAAAGCAGGCAATGCTTTACAATAGAAGCAACTGTCCATTGTCCATACCACTGAGTatgtggaaataaatatgtattagtgCTTAATCTGATAGGACATGTACTTCTTGAGTAGACATGGATATATACTATGCATGCAGTTATTTTAACAAATCTAAaagcatatactgtatactatagcatacttttgcattttttttataaatgaaattGCTATAgagttttgttatgtttttttgtgggggggagggtgtCATGAGGTTGAAGAATAAGAGAAACTGAGTATATAATGGGTGCTGAAAATAGATTTTCTGGGCTgctcaattattttaatgtttactttgtttaaagGCTGggacacatatttgttttttgtagtatAAGACagctaattaactaattagtgAACCAATGGAATGGAGACGCATTGTGTGAAATGTTCATCACCCATGTGAACAATTCCTATAAAAACACCGCAGAGGGGAACTATCCCAGTCCCGCCTAGTCGGTTTAGTGTGTTAGTAGCAGTGTATAAGTAAAATATCTGTGATTTTCCTGTTCCATTCtatcattttagtaattttaaAACTTATAATTGTAACCTACATTGTAATCGTGACTCCTGTCAATAACCCAAAGGAAAACTCTTTGGTGTTTCAGGAAGTGACGTTTCAGCAGAAAAGTCTACTTCTTCAAGAGCAAGGGATTGTCTTACCCCTGCAGCTGGGGCTAGTTCAGTGGCACAGCGAGCATATGGCTCTGTGTTCACTGGGACACTTTGAGATTGAAAGTAGCCTTTAAAAGAGATTAACATTTTAATCTGGCATTATTTACACCATTAACAAGTGGAGTCCCACTGCACTGcaataaacacatcaaataaagGCTCATAATACATCCATATGTGTCTCGTTTGCCGTTACTAATATGACAAAGTTCCTGTTTATCTTgggttaatgaaaaatacattttaataatgctgaatgtaatatttaatgaattaattgtgCCTGATCTGGCCACTGCACACATTAGGAATGtaatactgcactgtatttgaCTTGTTTTGTTAGGACCTACATGCCTATTGTATATtggtgtatattgtattttgcatttattgtaatttactgtattatgCAAATCTTTTGAGAagtgtattttgtgacaacAGCAGGTCGCCCTGGCTAATGGCGtctgcaaaataaagaaacaaaggcAAGTTCTCTCCTCATCACATAAGTAGAGTTGTACCAGTGATAGTGAACCACAGATTGCTGTTGGATGGGCTATGAAATTAAGCACCAAAACAAAGCTcaagatatatgtgtgtgtgtgttgtgtgtgtttttgagggAGTCAGTTCTGAAAAGCATTGGATAGAATGTTTctccattttattaaaacatttgaaatcccCAAAAtgctatacatacatacatacatcatgtttttaacacatattataggTATATATTGTAAGTACTgtgttacaaaatattatttataagtaCTTTAAATAACCTTCAAGTATCTTTTACTGCTACAGGCTGATCTCTCATTTGGCGGCATTGGTCTTATACTAAGGATTCctcatgtaaaaaaatatggTAAAGTGCTCAATTCCTGTAACAGTCCAAAACACtctaaatcaaatttaaacagATGTAATCTAACATGAAGCTGCTTTACATTCATTTAAGAACAAAACAGGATTTAAAACTACCAATGTTGAAGTTATCCCCCTTTTATGACCTTGCTTTGTGAGCAATACAATCTTCATATTATGGGCAAACAACTCTCACAGTGCAATTCCTTTTAGATCTTAATAAAAACTGGcatataaaaagctttttacaGTGAATACTGTTGCACAATTTCCACAAAAGATGAAAACATTCCTGGTGGAAAAGATCCAAggtgtattttgaaaatgttgtcctgtgagttttgtttaatttgacagATCAGCCCGTTTCAACAAagaataattgtattgtgttacaaacaataaaaatgtaaaatgatttaaatggaaaaggATAGGTTTTGTTTATCAACACATTCAATAATACATGCTCTTTATAACCAATTCTGAAAGCTAAAATATGTTGAAATTGATATATGGCAACTGGTTACctttaaacaacaaaatggAACATCCAATCAATTTTTGCAACTGCTTATTAAGATATAGCCTTAATGATGTCATCCTATAAACattaaaaggtaaaaaatatattatttaatttagtattgaatgctttaatttctgtttcATCCTATTCCATTTGTGACCCCAGTCGAACCTGAACTCGAACTCCATACAGGTAACAAATGAAACGCATACCAAGGAATGTCATTAACAATGCAATCCTGAGAAAGATTTCTAAACATTCATTCCATCTCTGAATATCAGATCGAAAGAAAACAGTGAAGAGATTTTGTGTGATGTACAGAGTgagactgttttgtttgttaaatataaaaatctttCCTTAAACAAATTAGTTGCTCCTGTGGGGCTTTGAGGAAGACCGGCTGGTTCAATACTGTAAATCAAAGCACATTTGTGATGGCAAACATTTAaagcagaggttcccaaacctCTTGGCTTTTCCCGCACCTCCCATTTGAGTCACAGCTCATGTTTGTTAAGTGTTGGAGACATCTCCAACAGCACTTTGATGTCTGGTGATAATTTGGACACACTCTCAAAAGAACAATAGTCTAGTAAtaattgttttctgctttttcttggCCTCTGGTCATGGAGGCCATGCTGCTTTACTTGCTGAACCGTTTGTTGAAGGAAAAGCTGCGCTCAGGGTCCTGTCCTTGGACAGGTCAAGGAGTCCTGTAGATCAGATTTTTCACCCCTTCATCTTTTtaccacagtttgggaaccgcTGATCTAAATGATTGCACATATGTTTTAATCGCACTGTTTCTGTGCAATAACCCAACCGATTCCTTATTGACTATGAGTAGTAAAGAGACTCTCTACGACCTCACACCTTTTCCAAATCACACCCTACCCTGACGGTAATAAGGCTGCACCTGTTTTATTGGCAAAACTGATATTCAGATTACTGCAGAGACTAAGCATTTGGCATCTTCAGAGcctttaacaaaaccaaaagtcTGAAATTTATAACAAGACAGTGGAAAACTGCTATTTTCTATATTATATTAGTGGTAGAATTACATGTAATGTCCTGTTGTAGTTATACTTCATGAGagaattacaatttaatatattaagatatattgaaattgaaaaggaCGTTTCTAGAacattttggaagaaaa

Function

NR:

description
PREDICTED: kinesin-like protein KIFC3

GO: NA

KEGG:

id description
K10406 KIFC2_3; kinesin family member C2/C3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002373 True 8517 mRNA 0.43 19 12082111 12096642

Neighbor

gene id symbol gene type direction distance location
AMCG00002367 NA coding downstream 21559 12055641 ~ 12060552 (-)
AMCG00002359 NA coding downstream 164011 11913110 ~ 11918100 (-)
AMCG00002358 NA coding downstream 169096 11905910 ~ 11913015 (-)
AMCG00002357 capzb,LOC106583096,LOC106565651,LOC105897928 coding downstream 189412 11882073 ~ 11892699 (-)
AMCG00002345 NA coding downstream 212759 11864614 ~ 11869352 (-)
AMCG00002377 NA coding upstream 2682 12099324 ~ 12100920 (-)
AMCG00002375 NA coding upstream 27556 12124198 ~ 12139756 (-)
AMCG00002376 NA coding upstream 43363 12140005 ~ 12142344 (-)
AMCG00002374 NA coding upstream 48504 12145146 ~ 12171681 (-)
AMCG00002382 smarcc1,LOC106605342,LOC106581105 coding upstream 88392 12185034 ~ 12203026 (-)
G122726 NA non-coding downstream 37092 12043315 ~ 12045019 (-)
G122621 NA non-coding downstream 218055 11862903 ~ 11864056 (-)
G122636 NA non-coding downstream 222786 11857391 ~ 11859325 (-)
G122633 NA non-coding downstream 233919 11847081 ~ 11848192 (-)
G122632 NA non-coding downstream 236440 11844392 ~ 11845671 (-)
G122801 NA non-coding upstream 99278 12195920 ~ 12243914 (-)
G122858 NA non-coding upstream 904199 13000841 ~ 13005335 (-)
G122869 NA non-coding upstream 955384 13052026 ~ 13052390 (-)
G122877 NA non-coding upstream 970579 13067221 ~ 13067627 (-)
G122879 NA non-coding upstream 972192 13068834 ~ 13069238 (-)
AMCG00002368 rbm24b,rbm24,rbm24a,LOC106596654,LOC107601977,LOC106517771,LOC105905339 other downstream 75759 11995828 ~ 12006352 (-)
AMCG00002351 NA other downstream 209249 11869607 ~ 11872862 (-)
AMCG00002350 tmem240a,tmem240,LOC107687438,LOC108275582,LOC105898995,LOC107593924,LOC107673083 other downstream 227220 11848470 ~ 11854891 (-)
G122597 NA other downstream 347787 11731617 ~ 11734324 (-)
AMCG00002327 spen,LOC108414948,LOC106565133,LOC107591084,LOC107737540 other downstream 397022 11647911 ~ 11685089 (-)
G122862 NA other upstream 931555 13028197 ~ 13029406 (-)
AMCG00002421 sec61b,LOC102796100 other upstream 1552585 13649227 ~ 13654247 (-)
G123263 NA other upstream 2844618 14941260 ~ 14946311 (-)
G123585 NA other upstream 4739514 16836156 ~ 16839722 (-)
AMCG00002503 NA other upstream 4861520 16958162 ~ 16974301 (-)

Expression


Co-expression Network