AMCG00002383


Basic Information

Item Value
gene id AMCG00002383
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 12251292 ~ 12260406 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002383
CAGCTAACTAGGGGTGCCAGGCTGTCGGATCCATTCTGTCTGCTGCAATGCAAGGCACACGTACTTGGTTGATCACTGCCCTCCACTGGCACCATCTGGTCATCACCAACACGTTCAAAACTGGGGTGTGAAACGCAGAGTGGAAGCGCCCTCCTCTCGCCACAACCAAGATGGCGCTCTTCCGCCTCCACCACGTTCGTTGCGCTCGACAGTCGCAATTCCTCTGCGTCACGTCCGGCTTTCCCTCACATTATTGTTTACAGCCAAGATGGAGGGGGAGCCGTGTGTAGAGAGTCTGGAAAAACGACTACAGGAACTAGAGAGGCGGCTTTATGGGCAGAGGGCTGTCCGTGGCAGTAAGCCCGTGAAGTGTGCCGAGGCTCTGGTGAGGGTTCAGACGTCCCTGGCCAGCACGGCCAACAAGCGGGAGCGAGTGAAGATCCTGCACAAGAAGATCGAGGACCTGATGAAGTACCTGGACCCCCAGTTTACGGAGCGGATCGCCATCCCCGACGCCATGAAGCTGGAGTTTATTCTGGCAGAGGAGGACTTCCTGCTGTCTCAGGCGTCTCTGCTGGAGCAGGTCAGCAATCTCCAACCCCTGCTGGACAGTCCACACATCGCAGCGGTCCCTGACCATGCTGCCAGGCTGCAGCGGCTGGCACAGATCCACATCAAACAGCAGGATAAGTCCGAGGCTCTAACCGAGGAAGTGAAGAAGCAGTTTGAAGATTACAACAAGATGATGTTCCTGCTGTCCAAGCAGTTCTCTCAGTGGGACGAGACCCTGCGAGCGCTGGAGGGCAGTGGGCAGTAACCGGAATAACCACCGAGGGGCAGCCAGTCACACAAAGAATCCTCCACCGCATGTCACACGAGGACACAAGAAGAACAGGGCTAGTGCTgattaaacaatgttatttaaacacaaGTGCAGCCTTTACAGCGCCCTTGATATGAGCTGATATAATTTCTTTCCCAGACACAGTTATGTGCTGTTGACGACGTGAATGCTGTGCTGTGCGTTTGTACTGCAGCTCCAGCTAGTTGCCATTCAGATCCACTGACGCGCACAGTCTGTACTAGGCCCTAGTTCGGAATCATTATCTGGAGTCTAAATACAATTGAAACTCCCTCCCTCAGTTTAGGTCCTGTTGCAGGCCTGTGTTTTCAGTGCAGGTGTGAAGCACTGAGAATAAGGTGCTGGTTGTATCGAACACATGCAGTGTTAGTGGATCTCTGCACTGGAGATGACTGTCCCCTTATTTGCTTGTCATAACCTGTGCTGTTTTAATAAGGACCACAATAAACTTAAATTATTCAACTAAA

Function

GO: NA

KEGG:

id description
K10425 DCTN3; dynactin 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002383 True 1329 mRNA 0.53 8 12251292 12260406

Neighbor

gene id symbol gene type direction distance location
AMCG00002384 NA coding downstream 2346 12248147 ~ 12248946 (-)
AMCG00002382 smarcc1,LOC106605342,LOC106581105 coding downstream 48266 12185034 ~ 12203026 (-)
AMCG00002374 NA coding downstream 79611 12145146 ~ 12171681 (-)
AMCG00002376 NA coding downstream 108948 12140005 ~ 12142344 (-)
AMCG00002375 NA coding downstream 111536 12124198 ~ 12139756 (-)
AMCG00002385 tsnare1,si:ch211-208k15.1,LOC106605505,LOC107679652 coding upstream 223488 12483894 ~ 12504026 (-)
AMCG00002389 NA coding upstream 722423 12982829 ~ 12997422 (-)
AMCG00002392 NA coding upstream 772223 13032629 ~ 13044363 (-)
AMCG00002398 NA coding upstream 833658 13094064 ~ 13102528 (-)
AMCG00002395 NA coding upstream 858074 13118480 ~ 13121283 (-)
G122801 NA non-coding downstream 7378 12195920 ~ 12243914 (-)
G122726 NA non-coding downstream 206273 12043315 ~ 12045019 (-)
G122621 NA non-coding downstream 387236 11862903 ~ 11864056 (-)
G122636 NA non-coding downstream 391967 11857391 ~ 11859325 (-)
G122633 NA non-coding downstream 403100 11847081 ~ 11848192 (-)
G122858 NA non-coding upstream 740435 13000841 ~ 13005335 (-)
G122869 NA non-coding upstream 791620 13052026 ~ 13052390 (-)
G122877 NA non-coding upstream 806815 13067221 ~ 13067627 (-)
G122879 NA non-coding upstream 808428 13068834 ~ 13069238 (-)
G122897 NA non-coding upstream 881462 13141868 ~ 13147672 (-)
AMCG00002368 rbm24b,rbm24,rbm24a,LOC106596654,LOC107601977,LOC106517771,LOC105905339 other downstream 244940 11995828 ~ 12006352 (-)
AMCG00002351 NA other downstream 378430 11869607 ~ 11872862 (-)
AMCG00002350 tmem240a,tmem240,LOC107687438,LOC108275582,LOC105898995,LOC107593924,LOC107673083 other downstream 396401 11848470 ~ 11854891 (-)
G122597 NA other downstream 516968 11731617 ~ 11734324 (-)
AMCG00002327 spen,LOC108414948,LOC106565133,LOC107591084,LOC107737540 other downstream 566203 11647911 ~ 11685089 (-)
G122862 NA other upstream 767791 13028197 ~ 13029406 (-)
AMCG00002421 sec61b,LOC102796100 other upstream 1388821 13649227 ~ 13654247 (-)
G123263 NA other upstream 2680854 14941260 ~ 14946311 (-)
G123585 NA other upstream 4575750 16836156 ~ 16839722 (-)
AMCG00002503 NA other upstream 4697756 16958162 ~ 16974301 (-)

Expression


Co-expression Network