AMCG00002384


Basic Information

Item Value
gene id AMCG00002384
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 12248147 ~ 12248946 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002384
ATGGAGAACTACCGCAAGGCTCGCACAGAGGAGGagccctgcccctgccccttcACCGGGCTGCCCGCCGGCACGCCAGAGATGCGGGTGAAGGACGGCAGCAAGATCCGCAACTTGCTGGGCTTCGCGGCCGGGCGGCTGGAGGGCGGGGAGGCACGCAGCGTGGTGTTTGTGGGCACGGGACGCAGCGTGGCCAAGGCGGTGAGCTGCGTGGAGGTGCTGAAGCGGCGGGTGCACGGGCTGCACCAGCTGACCCGCCTGCAGTACCGGCGCACCCAGGAAGTGTGGGAGCCGCTGGAGCCGGCCGCCGGGCTGGACAGCCTCACCGTCAGCAGGAACGTGCCAGCCGTCTGGATCCTGCTGTCCAAGGACCCCCTGGACGACACCCAGCCAGGGTACCAGCCGCCCGGGTGCTTCGACACGCTGTGGGCCCAGGCAGCCAAGGAGGAGGGGGCCCCACCGCCGCCCCGCAGGAGGAGAGGCGGCGCCAGTAGGGGCAGAGGGGCGAGGCAGGGAGGTCGCAGGGACGGAGTGGGGAAGGTACAGAGCCGAGGAGGCGCGGCGCAAGAAACCTGGCAGGAAGGGGGTGTCCGGGTACACAGCAGCTCTTCAGTTTCGTCCTCCATCACCGGTTCACTCTCCCTGTACCCGCCGCACAGCCCTGCCACTGAACTGACCCGACTGGAGCTGCCGCCGTGGTCTGAGCTGAGACTGGCAGGGGAAGACAGACCCACCCTGGTGATGGACTGA

Function

GO: NA

KEGG:

id description
K14525 RPP25; ribonucleases P/MRP protein subunit RPP25

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002384 True 750 mRNA 0.69 2 12248147 12248946

Neighbor

gene id symbol gene type direction distance location
AMCG00002382 smarcc1,LOC106605342,LOC106581105 coding downstream 45121 12185034 ~ 12203026 (-)
AMCG00002374 NA coding downstream 76466 12145146 ~ 12171681 (-)
AMCG00002376 NA coding downstream 105803 12140005 ~ 12142344 (-)
AMCG00002375 NA coding downstream 108391 12124198 ~ 12139756 (-)
AMCG00002377 NA coding downstream 147227 12099324 ~ 12100920 (-)
AMCG00002383 NA coding upstream 2346 12251292 ~ 12260406 (-)
AMCG00002385 tsnare1,si:ch211-208k15.1,LOC106605505,LOC107679652 coding upstream 234948 12483894 ~ 12504026 (-)
AMCG00002389 NA coding upstream 733883 12982829 ~ 12997422 (-)
AMCG00002392 NA coding upstream 783683 13032629 ~ 13044363 (-)
AMCG00002398 NA coding upstream 845118 13094064 ~ 13102528 (-)
G122801 NA non-coding downstream 4233 12195920 ~ 12243914 (-)
G122726 NA non-coding downstream 203128 12043315 ~ 12045019 (-)
G122621 NA non-coding downstream 384091 11862903 ~ 11864056 (-)
G122636 NA non-coding downstream 388822 11857391 ~ 11859325 (-)
G122633 NA non-coding downstream 399955 11847081 ~ 11848192 (-)
G122858 NA non-coding upstream 751895 13000841 ~ 13005335 (-)
G122869 NA non-coding upstream 803080 13052026 ~ 13052390 (-)
G122877 NA non-coding upstream 818275 13067221 ~ 13067627 (-)
G122879 NA non-coding upstream 819888 13068834 ~ 13069238 (-)
G122897 NA non-coding upstream 892922 13141868 ~ 13147672 (-)
AMCG00002368 rbm24b,rbm24,rbm24a,LOC106596654,LOC107601977,LOC106517771,LOC105905339 other downstream 241795 11995828 ~ 12006352 (-)
AMCG00002351 NA other downstream 375285 11869607 ~ 11872862 (-)
AMCG00002350 tmem240a,tmem240,LOC107687438,LOC108275582,LOC105898995,LOC107593924,LOC107673083 other downstream 393256 11848470 ~ 11854891 (-)
G122597 NA other downstream 513823 11731617 ~ 11734324 (-)
AMCG00002327 spen,LOC108414948,LOC106565133,LOC107591084,LOC107737540 other downstream 563058 11647911 ~ 11685089 (-)
G122862 NA other upstream 779251 13028197 ~ 13029406 (-)
AMCG00002421 sec61b,LOC102796100 other upstream 1400281 13649227 ~ 13654247 (-)
G123263 NA other upstream 2692314 14941260 ~ 14946311 (-)
G123585 NA other upstream 4587210 16836156 ~ 16839722 (-)
AMCG00002503 NA other upstream 4709216 16958162 ~ 16974301 (-)

Expression


Co-expression Network