AMCG00002386


Basic Information

Item Value
gene id AMCG00002386
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 12638486 ~ 12696128 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002386
ATGGGAGGACTCTGTTGCCTGCTGTCGATAGCACCAAAGCTgtctgaaatacaatacatcacCAGAGACACCACACACCATTACTGCATGCCATTAGATGGGGATGAAGGAGGCTGGAGTGGCTGGGGACGCTGGGCGGAGTGCAGCACTGACTGCGGAGGAGGAGTGCAGACCCGGAGCCGCACCTGCCAGTCGCCTGCTGAGGAGGCCTTCCTGTGTGAGGGGGTGCTGGAGGAAGGGCGGCCCTGCAACCAGCAGCCATGCATCGGCAAGGTGCGCTACAGCTCCCGAAGCCAGTCCCTCCGCTCCGTGGACAGCCGCAGGAGAGATGAGATCGATGAGCCACGCTACGGACACCTCTCCCCACAGACAGTGGAGTCGGCAGCGGCGGAGGAGTGGTCCCCCTGGAGCGTGTGCTCCACTACATGTGGCGAGGGCTGGCAGAGCCGCACGCGTTTCTGCGTGTCGTCCTCCTACAGCACGCAGTGCAGCGGGCCCCTGCGTGAGCAGAGACAGTGCAACAACTCCGCCGTCTGTCCAGCCGCTCTGATTGCAGTGCACGGTGCCTGGGACGAGTGGTCACCATGGAGCCTCTGCTCGTCGACGTGCGGCCGCGGACAACGGGAGCGAATGCGGACCTGCAAACCCCCCCAGTTCGGCGGCAACCCCTGCGACGGCCCCGAGAAACAGACCAAGTTCTGCAACATCGCCCTGTGTCCAGGGGAGACTGGCTGGAGACACGCCACTGCTTCCTCAGGGAGTGCCCAGGTAGGTCCTGCTGCCTCCCCCATTGTGGATGGAAAATGGCAACCATGGAGCCAGTGGGGCAGCTGTTCAAAGACATGCAGTGGAGGCAGCCAGCAAAGACAGAGGATCTGCTATGGGCCATTCTTTGGGGGTGATCAGTGCCCAGGAGACCAGGAGGAGGTGCGCCGCTGCAATGAGAAGAGATGCCCAGAGCCCCATGAGATCTGTGAAGAGGAGAACTATGACAAAGTGGTTTGGAAGAAGACCCCTGCAGGCGAGACAGCCGCAGTCCGCTGCCCGGCCACTGCCACAGGGCTGATCCTGCGCCGCTGCACGCTGGACGAGGAAGGTATTGCCTACTGGGAGTCTCCCACCTACATGAAGTGTGTCTCCAATGATTATCGGCACATCCAGATGATGacacgagACCATCTTGCAAAAGCGCAGCGGGGAATGGTGGGAGACGGGGTATCGGAGGTCATCACCAAGCTGATGAAGACGTCTCAGGATGGGACAAGCTACAGTGGGGATGTCCTGGCAATCCTGGACGTGCTGAAGAACATGACAGAGATCTTCAGGAGAGCCTACTATAGCCCCAACACCGTGGACATGCAGAACTTTGTCCAGACTGTGAGCAACTTGCTGTCGGAGGAGAACAGGGAGAGGTGGGAGGAGGCCCAGCTGatgGGCCCCAATGTCAAGGAGCTGTTCCGCTTGGTAGAAGATTTTATTGATGTCATTGGCTTCCGCATGAAGGACTTTCGAGATTCGTACCAGGTCACGGAGAATCTTGTGCTCAGCATCCACAAGAGGCCGGTCAGAGGAGCCACAGACATCAACTTTCCCATGAAGGGCTGGCGGGGAATGGTGGAGTGGGCGCGCAGTGCCGAGGACAAGGTCACCATCTCCAGGAATGCTCTGTCCATGGGCAAGCCAGATGTGGATGACTCCTCCATGTTTGTGACGGGGATTGTGCTGTACAGAAACCTGGGCAATATCCTCTCTCTCCAGCGGAATAACACTGTGCTCAACTCCAAGGTGATTTCGGTCACAATCAAGCCCACCCCGAACTCTCTCTCTGCCCCGGTGGAAATTGAATTCTCCCACCTCTACAACGGCACCATCAATCAAACCTGCATCTCCTGGGATGAGAGTGACAGCTCCTCGCTGCTGGGGTCCTGGTCCGGTAGAGGCTGTCGGGCTGTCCCGGTCGATTCGTTCAGGACCAAATGTGTCTGTGACCGGCTGTCTACCTTCGCCATCTTAGCAAAGCTGAACCCCGACTTGAACATGGACAAAGTACTGCTGCCATCAGTGACTCTGATTGTGGGCTGCGGGGTGTCGTCCctcactctcctcctcctcatcatcatctatgtgtctgtgtggagGTACATCCGATCGGAGCGCTCGGTCATCCTCATCAACTTCTGCCTGTCCATTATATCATCCAATGCCCTGATCCTGATCGGACAAACCCAGACCCGAAACAAGGTGGCATGCACACTGGTGGCTGCGTTCCTGCACTTCTTCTTCCTGTCGTCCTTCTGCTGGGTGCTGACCGAGGCATGGCAATCTTACATGGCCGTCACTGGCCGTCTGAGGAACCGGATCATCCGCAAGCGCTTCCTCTGTCTGGGCtgggGTCTGCCCGCTCTGGTTGTTGCCGTCTCAGTGGGGTTCACCAAAGCCAAGGGTTACGGCACTGTCAACTATTGCTGGCTGTCTCTGGAGGGAGGTCTCCTCTATGCCTTCGTGGGACcggctgctgctgttgttctgGTCAACATGGTTATTGGGATTCTGGTTTTTAACAAACTTGTATCCAAAGATGGGATTACGGATAAGAAACTCAAGGAGCGAGCAGGTCAGATGACAGTGCCTCTGTACAGTATGACGCTCAAATGTGCCAAGTGCGGAGTTATCTCGTCGGCTGACGTTTCCACCACAGCCACCAGTAATGCCATGGCATCGCTGTGGAGCTCCTGTGTGGTTCTGCCCCTGCTGGCTCTGACCTGGATGTCAGCAGTCCTTGCCATCACCGACCGCCGCTCCGCCCTCTTCCAGATCCTCTTCGCCGTGTTCGACTCCCTGGAGGGCTTTGTCATCGTAATGGTGCACTGCATTCTGCGGAGAGAGGTGCAGGATGCTGTGAAATGCCGAGCGGTGGACCGTCAGGAGGAGGGCAACGGAGACTCCGGGGGATCTTTCCAGAATGGACATGCTCAGCTCATGACGGATTTTGAAAAAGACGTAGACATGGCTTGCAGATCAGTTCTAAACAAGGACATCCTCTCATGCCGGTCGAACTCCATCCTAGGCACCCTCAAGCGCTCGTCACTGCAGGGAGACGAGAAGATGGCGCCCCAACAGCTCACCCTGCAGAAGGGCTCCAACTTCAACACGCTGCCAGCCAGCATGACCAAACTTCACCTGCAGAACGTGGCGGACTATGCCAGCCACACCCTGACGCTGAAGAGGGACAAGAGTGGTGGTGGGGAGCTGCCCAGCAGTAAATCCATCTACATCTGTGATGGAGAGCTGTTCAAGCAGCTGGACGCTGATCTGACCCGCACACAGAGCGAAAGCAGCGCCCCCGATGGCAGCAGCTACGTGTTGCTGCCCAACAACACCTCCACCCTGCGTGCCAAGCCCAAGGACGACCAGGCCAAGTACAACATCAGCATCGAGCAGCTGCCCCAGACCCGACTCATCCACCTCACCACCCCAGCAGGAGAGCCAGTTCCTGGATTCAGTCTGAAGACCCTGCCTGCGGACCGGGTCAGCGTGTCCTGCTCCGAGAGGGACTCCCCTGTCCAGAACCTGCAAAACGTCTCTAGTGAATCACAGATGACCAACAGCCTGTGCGATGCCGGGGATTCAGGGAACTCAGGCATGATGTCCAAGAGCGAGACTGTCTCTACACTGTCCATGAGCTCTCTAGAGAGGCGAAAATCCCGCTACGCAGAATTAGACTTCGAGAAGATCATGCACACGCGGAAGCGACACCAGGACATGTTCCAGGACCTCAACAGGAAGCTGCAGCACGCTGAGAAGGACAGGGAGTCTCCACCAGTGGACGGCAAAGTACGCAACAATCTCAGaccctctgacacacacacagacaaacctgTCACGCATCGGGGCACAAACACCCAGATCAAATACAGTGACATACAAGACACACTCACAAAaccacagtcacacacacaatcagcactggcacatacacacatgtcATACTCATCTCTTATATCTGTAAAGCGATGGAGTGTCTCATCGGGTGGCAGCGATAAAACAAACCTCAGTCAGGACAAACAACAGACACCCAGCAAAAGAGCATGGGAGGGAATCCGCAAAACGCACTCGCCCCCGTCCTGGGTACGCAAAGACCTGGAGCCCCTGCAGGCCTCGCCCCTGGAGCTGAAGTCTGTGGAGTGGGAGAAGACTGTCGCCACCATTCCCCTGGTGGGCCAGGAAATTATTGACCTGCAGACCGAGGTCTGA

Function

GO: NA

KEGG:

id description
K04596 ADGRB1, BAI1; adhesion G protein-coupled receptor B1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002386 True 4254 mRNA 0.57 32 12638486 12696128

Neighbor

gene id symbol gene type direction distance location
AMCG00002380 NA coding upstream 391497 12244723 ~ 12246989 (+)
AMCG00002381 NA coding upstream 394598 12242286 ~ 12243888 (+)
AMCG00002379 NA coding upstream 397131 12226849 ~ 12241355 (+)
AMCG00002378 NA coding upstream 427167 12204021 ~ 12211319 (+)
AMCG00002371 ptpn23,LOC106597002,LOC107591991 coding upstream 516709 12106189 ~ 12121777 (+)
AMCG00002391 NA coding downstream 325439 13021567 ~ 13024109 (+)
AMCG00002387 cyhr1,LOC107591623,LOC107742848,LOC107696565,LOC107706189 coding downstream 375298 13071426 ~ 13085078 (+)
AMCG00002394 NA coding downstream 393288 13089416 ~ 13090383 (+)
AMCG00002400 NA coding downstream 444539 13140667 ~ 13141587 (+)
AMCG00002401 NA coding downstream 494901 13191029 ~ 13194076 (+)
G122830 NA non-coding upstream 227345 12404942 ~ 12411141 (+)
G122829 NA non-coding upstream 265455 12372801 ~ 12373031 (+)
G122744 NA non-coding upstream 507739 12129878 ~ 12130747 (+)
G122743 NA non-coding upstream 508808 12128380 ~ 12129678 (+)
G122737 NA non-coding upstream 532963 12104670 ~ 12105523 (+)
G122868 NA non-coding downstream 355897 13052025 ~ 13052390 (+)
G122876 NA non-coding downstream 371137 13067265 ~ 13067635 (+)
G122911 NA non-coding downstream 491821 13187949 ~ 13188278 (+)
G122914 NA non-coding downstream 493154 13189282 ~ 13189862 (+)
G122929 NA non-coding downstream 608569 13304697 ~ 13305599 (+)
G122746 NA other upstream 498021 12133786 ~ 12140465 (+)
AMCG00002360 NA other upstream 622402 12011971 ~ 12016084 (+)
AMCG00002355 NA other upstream 739785 11894473 ~ 11898701 (+)
G122582 NA other upstream 802317 11835439 ~ 11836169 (+)
AMCG00002339 NA other upstream 923114 11710450 ~ 11715372 (+)
AMCG00002390 NA other downstream 335631 13031759 ~ 13051971 (+)
AMCG00002388 NA other downstream 348565 13044693 ~ 13070832 (+)
AMCG00002393 NA other downstream 429250 13125378 ~ 13129697 (+)
AMCG00002437 pcbp3,LOC108266078,LOC107657516,LOC107728912 other downstream 1631504 14327632 ~ 14361536 (+)
AMCG00002500 snrpd1,LOC105910057,LOC107655105,LOC107559756 other downstream 4262033 16958161 ~ 16960082 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location