AMCG00002392


Basic Information

Item Value
gene id AMCG00002392
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 13032629 ~ 13044363 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002392
ATGTCACTGTCATCTAGGAGCTCGctgttctcctcctcttcctcctcctcctcttctgcctCGCTCGTTCCATTACCCCCGTCCGCACCACTCAGCTCTGCCTGCGACGCCGCCGTGAGCTCAGACTGCACCGAGCCCCCCGGCTGCTGCACTGAAAGCCACTGCCTCAACACCCGACACAGGGGTGGAGAGAGGCTGAGGAAAGGAGAGcTGTCCAGCGCTTTGGCCCTGGGGAGGCCGTCTCGGGAGCTGGCTGTGATCCACGTGTCTCTGGCCGCGACCTACACTGACCTCCGGCAGCATGACAAGGCTGTCCAGCACTACAGACAGGAGCTGCGTCTGAGAGAGGGCAACCCCAAAGAGGAGTGTGAAACCTGGCTGAATATCACAGCGTCCCTGGAGGACAGTGGACAGGGCCTGGAGCAGCTGGAGCCCTGCTACCGCACAGCCCTGGAGTTTGCACAGAGAGCACAGCGGCCAAAGCTACAGGTAAGAGCTGCCAGACTGCCAGCTGTCCTGAGACTCGCTGAGCAGGGCAGCCCAATGCGGACGGAGGAGAAACGGAGACACGGGCAGACTAAGAATGATGCAGCGAGACTGactgtgctgttctgttctgtgtttcaggGTCACCCGATTGTGCGGGCGCTGCTGGACCAGGGGGCGAATGTGAACGACCCCGGGGGTCCGCTGTGCGAGGGGATCACTCCACTGCATGATGCCCTGAGCTGCGGACACTTCCCCGTTGCCAGGCTGCTGGTTGAGAGGGGTGCCTGTGTCAGTCTTCGCAACTCGAAGGGTTTGGCTGTTGAGGAGCAGGTTCTGCATGTCTGCTCTTGTCAGCACGTGGGTGTcattgtttgtgtctgtatacaggaGGGCGACACACCCCAGGACAGCCTGAGGCAGTGGCTCAAGACCTACAGTAAACACCTGGACCAGGAGACACGGCTGGAGTGCGttgagatggagagattgaGCCCACGAAAAACTGAGATGAGGAGAACCACCGTCTTCTACCTCTGCCTTCCGCCAGACAGGTTGAAGGGTCAGCTAAGGTGGTGGGCTCTGATGAAACACTTGCTGTGTCGGGAGAGCAAGCTGACCCTCCCCCCAGCCAccgccccctctcccccccagcTCTGCAGCACGGCCTGCTGGTCCAGCTTGTTGAGGCGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002392 True 1182 mRNA 0.61 8 13032629 13044363

Neighbor

gene id symbol gene type direction distance location
AMCG00002389 NA coding downstream 35207 12982829 ~ 12997422 (-)
AMCG00002385 tsnare1,si:ch211-208k15.1,LOC106605505,LOC107679652 coding downstream 528603 12483894 ~ 12504026 (-)
AMCG00002383 NA coding downstream 772223 12251292 ~ 12260406 (-)
AMCG00002384 NA coding downstream 783683 12248147 ~ 12248946 (-)
AMCG00002382 smarcc1,LOC106605342,LOC106581105 coding downstream 829603 12185034 ~ 12203026 (-)
AMCG00002398 NA coding upstream 49701 13094064 ~ 13102528 (-)
AMCG00002395 NA coding upstream 74117 13118480 ~ 13121283 (-)
AMCG00002399 NA coding upstream 107226 13151589 ~ 13152326 (-)
AMCG00002396 NA coding upstream 108005 13152368 ~ 13179775 (-)
AMCG00002397 NA coding upstream 138358 13182721 ~ 13186037 (-)
G122858 NA non-coding downstream 27294 13000841 ~ 13005335 (-)
G122801 NA non-coding downstream 788715 12195920 ~ 12243914 (-)
G122726 NA non-coding downstream 987610 12043315 ~ 12045019 (-)
G122621 NA non-coding downstream 1168573 11862903 ~ 11864056 (-)
G122636 NA non-coding downstream 1173304 11857391 ~ 11859325 (-)
G122869 NA non-coding upstream 7663 13052026 ~ 13052390 (-)
G122877 NA non-coding upstream 22858 13067221 ~ 13067627 (-)
G122879 NA non-coding upstream 24471 13068834 ~ 13069238 (-)
G122897 NA non-coding upstream 97505 13141868 ~ 13147672 (-)
G122942 NA non-coding upstream 240974 13285337 ~ 13286312 (-)
G122862 NA other downstream 3223 13028197 ~ 13029406 (-)
AMCG00002368 rbm24b,rbm24,rbm24a,LOC106596654,LOC107601977,LOC106517771,LOC105905339 other downstream 1026277 11995828 ~ 12006352 (-)
AMCG00002351 NA other downstream 1159767 11869607 ~ 11872862 (-)
AMCG00002350 tmem240a,tmem240,LOC107687438,LOC108275582,LOC105898995,LOC107593924,LOC107673083 other downstream 1177738 11848470 ~ 11854891 (-)
G122597 NA other downstream 1298305 11731617 ~ 11734324 (-)
AMCG00002421 sec61b,LOC102796100 other upstream 604864 13649227 ~ 13654247 (-)
G123263 NA other upstream 1896897 14941260 ~ 14946311 (-)
G123585 NA other upstream 3791793 16836156 ~ 16839722 (-)
AMCG00002503 NA other upstream 3913799 16958162 ~ 16974301 (-)
AMCG00002524 NA other upstream 4645645 17690008 ~ 17706289 (-)

Expression


Co-expression Network