AMCG00002395


Basic Information

Item Value
gene id AMCG00002395
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 13118480 ~ 13121283 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002395
AGTGCGGACACAAGCTTTGCAAAACACCACAATcgaaacagaaatgaaaaaaggtgTGGTCACCCAGTTTCCAGCTGCAGAGAGCAAGATGTGCCACTCGTTTCTCATAGTGGCTGTGGACTTCGGCACAGCGTACAGCGGCTACTGCTTCTGTGTCCAGTCCTGCACGGACAACATCCGCTCCGTGTCCTGGGACTCGGAGCACGGCTACAGACCCCCCAAACCCCGACCTGCGCCCTGTTCAACCCCCACAAGAAACTCAGTAGATTTGGCTATGACGCCGTCATCAAGTACAACACCATGGCTTCGGAGGAGTCCAGAAAGTGGTATTTCtttgaaaactttaaaatggaGCTGTACAATAAGGCGGGTCTGGTGTCAGAGCTGGACTCGGAGCAGCTGATTCTTGCCCTGGAGCCGGAGGCAGCATCCATGTGGTGTAAGCAGCTGCCCAAGGAAGGGTTtgtgggagagggaggaagggacaACACCTTTGACCAGACACCGGGAGTGCAGTACATTGCTGTGGACTGTGGTGGGGGGACTATAGACATCACAGTGCATAAGGTCCTGGAGAACGGCTCCCTGAAGGAGCTTCAGAGGGCGtctggaggggggtgggggggaacgTCTGTAGACAAGCAATTCCAAGCCTTTCTCAAAGAGACTTTCAATCTGGGTGTGTGGGACAGGTACAAGAGGGAGCACCCTGGAGAGCTGCACAGGATGATGTACAGCTTCTCCACTCAGAAGTGTACATCAGGAGAAGAGGACCTCTACATCATGTGCTTCGCCAATTTAATCAGATGTGCAGAGGAGCAGAAAGAGATGTCTGAGTATTTTAAGCATGTGGACGGTGTGTCTTGGTCAGATGGGTGTATTACGATTTCAAATAACAAGCTCAGAAGCTTCTTTGAGGGTAGCTTGAAGAGGATAGTGAATGAAGTAGAAGCAATCCTGTCAACACCTGAGATTCACATCGACTACATCCTCTTGGTCGGGGGCTATGCTTCTAGCACGTTCCTGAGAGAGGAAATCCGTCAGCAGTTCAGCAGCAGGTGCCGAGTGCTGTGTCCCTATGACTCCCAGCTGGCAATTGCAAAGGGAGCAATTCTGTTTGGAAACGACCCCAAAATAATCACATCCCGGGTCAGTGGCCTTACCTATGGCATTGCAGTAGCTAAGGACTTTGATTCTTCAGTCCACGACCCCAGAAAACGCAGAGTAAATAAAGCTGGGGACTATGTGTACTGTGCGGATGTGTTTGCTAAATTAGTGGAAAAGGGTCAGTCTGTAGCATTTAATGAAATCTCAGAGTATTTCTATTCACCCATAGATAAAGAGCAGAAGTCCatgcattttagatttttccaCACAGAAAAGCTGTGTGCCATGTATGTGGATGAGGCTGACATGCAGAGAATCGGCTCCTTCACTGTTACGATGCCCGATACCAGTCTGGGCAGGATGCGCAGAGTCAGACTGGACATTAAATTTGGTCTAACAGAAATACAGGCCACAGCCACTGATATGTCATCCTATGAAACACAAGCAATCAGCCTGGACTTTTTGACTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002395 True 1578 mRNA 0.50 3 13118480 13121283

Neighbor

gene id symbol gene type direction distance location
AMCG00002398 NA coding downstream 15952 13094064 ~ 13102528 (-)
AMCG00002392 NA coding downstream 74117 13032629 ~ 13044363 (-)
AMCG00002389 NA coding downstream 121058 12982829 ~ 12997422 (-)
AMCG00002385 tsnare1,si:ch211-208k15.1,LOC106605505,LOC107679652 coding downstream 614454 12483894 ~ 12504026 (-)
AMCG00002383 NA coding downstream 858074 12251292 ~ 12260406 (-)
AMCG00002399 NA coding upstream 30306 13151589 ~ 13152326 (-)
AMCG00002396 NA coding upstream 31085 13152368 ~ 13179775 (-)
AMCG00002397 NA coding upstream 61438 13182721 ~ 13186037 (-)
AMCG00002403 nacad,LOC107579097 coding upstream 75542 13196825 ~ 13213803 (-)
AMCG00002404 NA coding upstream 98325 13219608 ~ 13227144 (-)
G122879 NA non-coding downstream 49242 13068834 ~ 13069238 (-)
G122877 NA non-coding downstream 50853 13067221 ~ 13067627 (-)
G122869 NA non-coding downstream 66090 13052026 ~ 13052390 (-)
G122858 NA non-coding downstream 113145 13000841 ~ 13005335 (-)
G122801 NA non-coding downstream 874566 12195920 ~ 12243914 (-)
G122897 NA non-coding upstream 20585 13141868 ~ 13147672 (-)
G122942 NA non-coding upstream 164054 13285337 ~ 13286312 (-)
G122945 NA non-coding upstream 167758 13289041 ~ 13289249 (-)
G122946 NA non-coding upstream 168025 13289308 ~ 13289916 (-)
G122947 NA non-coding upstream 169843 13291126 ~ 13291819 (-)
G122862 NA other downstream 89074 13028197 ~ 13029406 (-)
AMCG00002368 rbm24b,rbm24,rbm24a,LOC106596654,LOC107601977,LOC106517771,LOC105905339 other downstream 1112128 11995828 ~ 12006352 (-)
AMCG00002351 NA other downstream 1245618 11869607 ~ 11872862 (-)
AMCG00002350 tmem240a,tmem240,LOC107687438,LOC108275582,LOC105898995,LOC107593924,LOC107673083 other downstream 1263589 11848470 ~ 11854891 (-)
G122597 NA other downstream 1384156 11731617 ~ 11734324 (-)
AMCG00002421 sec61b,LOC102796100 other upstream 527944 13649227 ~ 13654247 (-)
G123263 NA other upstream 1819977 14941260 ~ 14946311 (-)
G123585 NA other upstream 3714873 16836156 ~ 16839722 (-)
AMCG00002503 NA other upstream 3836879 16958162 ~ 16974301 (-)
AMCG00002524 NA other upstream 4568725 17690008 ~ 17706289 (-)

Expression


Co-expression Network