AMCG00002411


Basic Information

Item Value
gene id AMCG00002411
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 13377167 ~ 13384055 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002411
ATGAGCTCCCACAAAGCTAAAGCAGCAGCAGGGAAAGGTGTTGGGAAAAGCCCTGTGAAGGGGAGAGGCCAGGCCAAGAGACCAGgaCCGAAGAGCAGGGTGCCACAGAAGAGTGCTGCCCAAAACCCACCCAAGACTGAAGCTGGCAAAAAGGGAACAGAGCTCAGCCGGGAGGAGAGGGCCGCTGTTACCCTCCAGAGTGCTGTGAGGCGTCTTCTGGcccggagagagagagtgcgcagggagagagagagggaggagtaCGAGGCGCTGATGGAGCGGCTGCAGAAGGAGGCGTTTGTGGCACTGGTGCGCAGAGAGCAGGAGGAGGCGGAGAAGGAGAGGCtgagggaagaggaggagaggaagaggaggcaggAGGAGCAGCGCAGGAGGACTCGTCTCCTGGAGGCAGCCTTTgagggagaggtggaggagATCCTGGCTGTGCTGAAGGAGGTGTCTGATCTGGACTCGCAGCGCGGCCTCGGGTTCGACGAGGCGGGGAAGCAACAGCGCCTGCTCCGTCAGCTGCGGATGATTGACAGTACCGACGCCAATGGCAACACGGCGCTGTCAGAGGCGGCAGGGGGCGGGCAGTCTGAAGTCATCACCCTGCTGGTGGAGTGCGGGGCTGACGTCAACTGCAAGGCAGGGCTGAGAGCCATGACGCCCCTGTACCGAGCAGCATTCGGGGGTCACCTAAGGGCCGTGCAGACGCTCCTGCAGCTGGGGGCAGATCCCAGAATGCATGCAGATGATGGCTGCACACCTGAGCAGGTGGCCTCAGGGGAGGGAGTGGCCCTCACCCTGCAGGACTGGGACCTGATGGCCACCGATGTCATGCTGGAGAGGATGGAGgcagagaggcagaggaggGCACGAGAAGAACAGAGCCAGCGTGACGCCAAGACTGACCGAGCACACGAGGTgtcagagagagTTGTGCATGTCTCAACGGCTTTTCTGCTGGTGTCACTTAACACTGCATTGCTCCGTTACCTGTCCTTGTCGTTGTGTGTGGTGGATGTGCAGCTGCAGAGAGCGTACTGTGAGCTCAACAAGAGGATCGCTGAGCATGACAAGTGTGAGAGGAAGAGGATGGGCCGAGAAGAGCTGACGCTGACGgcagTTCGAGAGGCGGAGGAGGAGCTGGCCCGGGCGAGAGCTGCAGCCCAGCAAGCTGAGGCAGATCTGTCACAAGCCCGGCTGGAGCTCCGGGAGCAGACTGGGGGAGGCGCTGTGTCAGACAGAGCAGGGGTGCACTGCCTTGTGCGAGAGCTGGACGACGTGCTGCTCAAAGACGTGGGCGGCAGGATTCGGGAAGACGGCAGGTGGCCGCTGCTCATTGACCCCTCGGGCCAGGCGGCCATCTTCCTGCGCTACAGAGACACCAACTACCTGGATGCCTTGAATCCAGGAGACATGCAGCCCGAGGCCCTGAGACAGGCACTGCTCGGAGCCATCAGGTGGGAGGGGGAGGTGTTTGGAATAGAGGGCAAAGAAAGGGCAAAAGGGCAGAGAGGGGAGAAGATTGGGGGCCGCAGTGGTAAAGCCCTGTCCTTCTCCCCCAGGTTTGGGAAGCCCCTGGTCATCAACATGATGGAGGTGGATGTGTTTGCATCGGTGCAGAACCAGCTGGACCAGGTTCAGGCCGGGCTGAGTGCGGAGCTCATGAGCAGACAGCTTCTACAAGGAGAGAGGTACCTGGGGCTGGCACGGCCCACTGATGGCCCTCAGTACGCCAAGACAGAGTTCAGGCAGGCCAGGACAGGCAACTTCAGCTTTGTCCTGGTGACCAAGCTCCGCAACCCTCCAGAAGCCCTACTGACTGCCTTCTACCCCATCGAAGTCACCATCCCTGGGCCGAAGACTGGTGATTATTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002411 True 1887 mRNA 0.61 14 13377167 13384055

Neighbor

gene id symbol gene type direction distance location
AMCG00002410 setd2,LOC106606040,LOC107596709 coding downstream 7770 13332995 ~ 13369397 (-)
AMCG00002405 ccdc12,LOC102782761 coding downstream 127316 13238743 ~ 13249851 (-)
AMCG00002404 NA coding downstream 150023 13219608 ~ 13227144 (-)
AMCG00002403 nacad,LOC107579097 coding downstream 163364 13196825 ~ 13213803 (-)
AMCG00002397 NA coding downstream 191130 13182721 ~ 13186037 (-)
AMCG00002415 NA coding upstream 22297 13406352 ~ 13411130 (-)
AMCG00002416 NA coding upstream 30245 13414300 ~ 13430384 (-)
AMCG00002417 LOC106605926,LOC106594359 coding upstream 74428 13458483 ~ 13478876 (-)
AMCG00002419 NA coding upstream 130269 13514324 ~ 13531753 (-)
AMCG00002420 NA coding upstream 153427 13537482 ~ 13570758 (-)
G122957 NA non-coding downstream 71572 13303152 ~ 13305595 (-)
G122956 NA non-coding downstream 74085 13302120 ~ 13303082 (-)
G122955 NA non-coding downstream 77049 13299523 ~ 13300118 (-)
G122954 NA non-coding downstream 78493 13297432 ~ 13298674 (-)
G122953 NA non-coding downstream 79813 13296904 ~ 13297354 (-)
G122991 NA non-coding upstream 27444 13411499 ~ 13412296 (-)
G123014 NA non-coding upstream 71030 13455085 ~ 13457059 (-)
G123027 NA non-coding upstream 103059 13487114 ~ 13491617 (-)
G123152 NA non-coding upstream 694189 14078244 ~ 14111201 (-)
G123175 NA non-coding upstream 1158766 14542821 ~ 14543020 (-)
G122862 NA other downstream 347761 13028197 ~ 13029406 (-)
AMCG00002368 rbm24b,rbm24,rbm24a,LOC106596654,LOC107601977,LOC106517771,LOC105905339 other downstream 1370815 11995828 ~ 12006352 (-)
AMCG00002351 NA other downstream 1504305 11869607 ~ 11872862 (-)
AMCG00002350 tmem240a,tmem240,LOC107687438,LOC108275582,LOC105898995,LOC107593924,LOC107673083 other downstream 1522276 11848470 ~ 11854891 (-)
G122597 NA other downstream 1642843 11731617 ~ 11734324 (-)
AMCG00002421 sec61b,LOC102796100 other upstream 265172 13649227 ~ 13654247 (-)
G123263 NA other upstream 1557205 14941260 ~ 14946311 (-)
G123585 NA other upstream 3452101 16836156 ~ 16839722 (-)
AMCG00002503 NA other upstream 3574107 16958162 ~ 16974301 (-)
AMCG00002524 NA other upstream 4305953 17690008 ~ 17706289 (-)

Expression


Co-expression Network