AMCG00002423 (frrs1l)


Basic Information

Item Value
gene id AMCG00002423
gene name frrs1l
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 13691020 ~ 13696602 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002423
CTGCACAATCGCATAAACACACAATTATCACTAATTCAACCTCTCTGAAATGGACTCCAGCCTGCAGTGGGATCGTCTCTGGCCCATGGCATGATGCTTCTGTACGGAGACCCGCAGAGGGGTTCGTGTTGTGGCGGATTCAGTGCTTCCTAGTGTTTGTCGGTGGACTCGGGTTTCTCTCGGCTTCAATCCGGGCTCCGGTGTCATGTTGTCCGCGTTGAAGCTGCTGCCGCCGCTGCTCCTCCTGCTCTACCCGCACTGCCGGCGGGGTGTCGTCTCCAGCCCCGCCGAGGACAGCGCAGCGAGGACGGGCCGCGGGGAGCACGGAGACCCGGGCCACGAAGAGACGCACCAGGACTCGTACAGCACCTTCGCGTCCGAGTTCTTCGAGTCGCGGTACCTGACCGATGGGGAAGGTTACCCCTTTCCTACTGCCCCACCAGTAGACCCATTCGCCAAAATCAAAGTGAATGACTGTGGGGTTACCAAGGGATGCTTCAGGTACGGGAAGCCGGGCTGCGACGCAGAAACCTGTGATTATTTTCTCAGCTATCGCCGGATCGGTGCGGATGTTGAGTTTGAGCTGAGTGCCGATACTGATGGCTGGGTAGCTGTGGGCTTCTCGTCAGACAAGAAGATgGGTGGGGATGATGTCATGGGCTGCGTCCACGACGACAATGGCCGGGTTCGGATCCACCACTTCTACAATGTGGGCCAGTGGGCCAAGGAGATTAAGCGCAATCCGGCTCGCGATGAGGAGGGCATCTTCGAGAACAACAGGGTGACATGCCGCTTCAAGAGGCCAGTCTACGTGCCCCGTGAGGAGACGCTGGTAGACCTGCACCTCAGCTGGTACTACCTGTTTGCCTGGGGTCCCGCCATCCAAGGCTCCATCACTCGACATGACATCGACTCGCCCCCCGTGTCCGATCACATGGTCAGCATCAACAACTACGAGGATGTCTTCATGCCCTCGGCCGCCTACCAGACTTTCTCCTCCCCGTTCTGTCTGCTCCTCATCGTTGCGCTCACCTTCTACCTGCTCATGGGGACGCCGTAAAGCGGCCACGGACAGGGGAGAGGGCAAGCAATAAATCCACAAGACTGGGAATTACTGTGTGCCACTGTCAAGGAACGGATCTGAGGTGTGCCAtagtatgtgcgtgtgtgtttgtgatgtatatatacagacaaacacacacacacacacacacacacacacacacacactgtacctgagaagaagaagacaaaGTAGTAGATGAAGCTCTCAGATTATTAAGCAAATGATTGTAGTTTCACCATCGTCTAACCAAAACAGTGACTTGAATAAGCACAATGACTTCATCTGATGCTGGGCCATTCTCTTAGGCAGGTAATAACGTTTACATTGATGTTGAAGTTAGTGTCCTCTGCCTTACTCTGCGGTGATTTGCAGTTCTGTTTCTTTGgtgtttacaattattattattattattattattattattattattataaatccaGAGATGCCAGAGTTGCATGTGCCAAGTATTCCCACCCCCTTTACATGTTCATCTCTTGTTCCACTGGTGTTACTCAAGCAGCCCATCATCACAGCCGAGCAAAAACGCAGGGCAATGAGACCGGGCTCATTTCGCATGCATTGCAAGCCggtaaaaaaatctgtttttcttcaggCATTTTTGTTCCTTGCTTTTCCAATGCCAACGAATTTGCATTCACCCTGTATGCAAAGCAGTAAGTGCCAGCTTTGCCTTGGCCATCTGAAGACCGCATGCTGCTGCCTATCTCTAATTAACCTGTAATGTCAGCATCCGTATACACGACTGCTGCCTTTTATGACACCCTGAGAAATCCACTCCAACACCAATTGTTTCCACTGAGTAGTACAGTCCTTGTGAGAttgaaaagatttaaaaatccAAAGTTTTTCTAAggcatttttacaatttttttgtaAGCTAAAGACCATAATCTGAAAGgaacaaaatgataataataaaaatacaatatttgtatagttttagTGAAATACTTAAAATCTGTTTCATTTACCAGTATTTTTAAACGTATCCTGTAAAGGTCAGTCAaattaaagtttgtttgcagtgTGCTTGGAAGACAATTCACTTTTTTACTCAATATCAGGAAATTGGGATGAAAACCCTTTTTTTCTTCGTGGTCTTGATCCAGGCTTTAATCAGTAGACGTCTCGAATAcattgcatatttatatattaaacaggGCGTGTCGATTCGACATTCTATACTTTGTTCATGGAATTAGCCTGATCAGAGATGTGTTATCAGACCAATGGATTACAGGCAGATAATACTGTAAACTTATTAGATAAACAACACACCAGTCCTGGGAAAAATGTTGTGGTTGCGgttaatgttaaaattattGTAAACTCAACCATGTTTAATGTATTCCTGTTTGTACTGGCAAAATATGCAACCTTTTCATTGTGCATTTCACCTGTGTTACTCTTGAGGTATAACCTTTGAATAGCCATATGTGAGGCAGAGTGCGAGTGATGTCCTTATATGAAGTGCCCAGCTACATAGAAGGAGACATAGCGAGTCATTActgatgttttaaaagcaggtaTTAGTGCTGATACGGGGGTACTATTGAAAACTTccctttaagaaaacaatagttGAAATAGAAATCACTGTCCCTTCTGTTGACACATGCTCAGTCTGATACAGGACCCTGCTTCCGGATGTTTTCACTGTGCAGCGGTTTGCTGTGATGTGAAGGAGCTTCATTGATGTTTAACATAAACCTACCTGTTGTATTAATTAACCCCTTTCTCAACAATACACCAGCTAAGCCAATATACTAATGtatgtgcaagtgtgtgtgtgtgtgcgtgcgtgtgtgtgtgtgtgtgtttgtgggcgGGTTTGTTATGACTATGACTGTGAATGCTTGTGAGGGTGAAGGGGTGACAAGTAAAAGGCTACGCAATACATGCCTTCAGGTCTGAGGAACAAAACTGTGGATGCATGAAGTAATACAGAGCAGAGAGAAAATCCGACAGTTGTAGGGGAGAGAGTTGTGCAGTGGGAAAAACACAGTGGCTATTGAAGCATTTGCATTCATCGATCAACATGAAGTGGCTTCCCTCCTGGACACAAATCAGCAGGACTCTTGAGCAAACAGACACCCGTGATATTTGTTGGCATGACATCATCAGTAAGATGTAATTGACAGTAAGCCGCCTGACTTTAATTTAGGGCTATAGGTATGTTGTGGTATGGATGTGTATTAACAGGTAGAGGGGCCCAGTGATGGGCAGTGATGAGAGTGAGGCTGTCTGTGTGGTTGGTGCCAATGTGTGTTTGACTCATACTGCTCCCCCTTTACAGTGATATTATTTACCAAGTCAGTATTTGTTCCtaataaatcaatgttaaaaaaag

Function

symbol description
frrs1l Predicted to act upstream of or within regulation of glutamate receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

NR:

description
PREDICTED: DOMON domain-containing protein FRRS1L

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002423 True 3437 mRNA 0.46 5 13691020 13696602

Neighbor

gene id symbol gene type direction distance location
AMCG00002422 NA coding upstream 34462 13655239 ~ 13656558 (+)
AMCG00002418 erp44,LOC107593692,LOC107723539 coding upstream 179737 13490178 ~ 13511283 (+)
AMCG00002413 NA coding upstream 235522 13440937 ~ 13455498 (+)
AMCG00002414 NA coding upstream 251826 13430836 ~ 13439194 (+)
AMCG00002412 NA coding upstream 284957 13389185 ~ 13406063 (+)
AMCG00002424 tmem245,LOC103353896 coding downstream 3648 13700250 ~ 13718461 (+)
AMCG00002429 ino80c,LOC107706244 coding downstream 170512 13867114 ~ 13877797 (+)
AMCG00002440 NA coding downstream 702585 14399187 ~ 14459606 (+)
AMCG00002439 NA coding downstream 869797 14566399 ~ 14576984 (+)
AMCG00002442 NA coding downstream 909062 14605664 ~ 14614093 (+)
G123043 NA non-coding upstream 100339 13572519 ~ 13590681 (+)
G123041 NA non-coding upstream 120209 13566414 ~ 13570811 (+)
G123039 NA non-coding upstream 144720 13546064 ~ 13546300 (+)
G122929 NA non-coding upstream 385421 13304697 ~ 13305599 (+)
G122914 NA non-coding upstream 501158 13189282 ~ 13189862 (+)
G123169 NA non-coding downstream 668434 14365036 ~ 14366335 (+)
G123171 NA non-coding downstream 672491 14369093 ~ 14369913 (+)
G123197 NA non-coding downstream 995379 14691981 ~ 14692776 (+)
G123295 NA non-coding downstream 1566347 15262949 ~ 15340169 (+)
G123386 NA non-coding downstream 1992999 15689601 ~ 15689963 (+)
AMCG00002393 NA other upstream 561323 13125378 ~ 13129697 (+)
AMCG00002388 NA other upstream 620188 13044693 ~ 13070832 (+)
AMCG00002390 NA other upstream 639049 13031759 ~ 13051971 (+)
G122746 NA other upstream 1550555 12133786 ~ 12140465 (+)
AMCG00002360 NA other upstream 1674936 12011971 ~ 12016084 (+)
AMCG00002437 pcbp3,LOC108266078,LOC107657516,LOC107728912 other downstream 631030 14327632 ~ 14361536 (+)
AMCG00002500 snrpd1,LOC105910057,LOC107655105,LOC107559756 other downstream 3261559 16958161 ~ 16960082 (+)
AMCG00002496 NA other downstream 3279686 16976288 ~ 16985906 (+)
G123807 NA other downstream 4218834 17915436 ~ 17984730 (+)
G123989 NA other downstream 5135412 18832014 ~ 18838531 (+)

Expression


Co-expression Network