AMCG00002432


Basic Information

Item Value
gene id AMCG00002432
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 13885177 ~ 13939261 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002432
cagaAAAAAGCTAAGGGACAGGAACTCTTCGACCAGATTCTGTATCAACTGGACCTCATAGAATCGGATTATTTTGGATTACAATTCATGGATCCAGAACAAGTTTCGcACTGGCTAGATGTCACCAAACCAATTAAGAAGCAAATCAAAAGGGAGCAAATCAACCTTACTGTTGGGCCTCCGTACACTTTGCACTTCAGGATAAAGTTCTACTCCTCCGAACCCAACAACCTGCACGAAGAGTTTACGAGGTATCTGTTTGTATTGCAGCTCAGACAAGACATTCTTTCGGGCAAgtTAAAATGCCCTTATGACGTTGCAGTAGAATTGGCTGCCTTCTGTCTTCAATcGGAGCTGGGTGACTGTGACCCCTCAGATCACTCCCCAGAGCTTGTGTCAGAGTTCAGGTTCGCCCCCAAGCAGTCAGAGGCCATGGAAATGGACATCTTCCAGCGGTGGAAGGACTGCAGggGGAAAAGTCCAGCTCAAGCAGAACTGTGCTTTCTTAATAAGTGTAAATGGCTGGAAATGTATGGCGTGGATATGCACTTTGTAAAGGGACGAGACGGTTGTGAATATGCCCTGGGACTCACTCCGACTGGAATCCTCGTGTTTGAAGGAGCCAACAAAATCGGCCTGTTCTTCTGGCCAAAAATCACCAGGATGGATTTTAAGAAGAGCAAATTGACTCTAGTTGTGGTGGAGGACGATGATCAGGGTCGGGAGCAGGAGCACACCTTCGTGTTCCGGCTGGACAGTGCCAAAGCCTGCAAGCACCTGTGGAATGGACGGACAGAGTACCAGGCGACTCACGGAGGCAGGCTGAGACGGAAGAGCACTTTTGAGAGGAGGCCCAGCAAACGATACCCTTCGCGCAGGCAGTCTATGGTGAAAGCACACAACCCTGCCAAAGCTGCACACCTCAGTGTGCAGACCAACCCCGACCCTAGCGTTTATCCGTACAAACAGAACATCCCAACCAGCCATGAGCAGTGGCACGCTGCccacatccctctctcctcacaCCTGCCACATCCCGGACACTCGGGCGGCATGAGGCTGCCCCACCCGGAAGAGCTGACGGCACGAGGGTCGCCAACCAGCAAGGAGCCGGACAGCAGATTAATCCTGGAGCAGAACCGCAAGAACTCCAGAACCGTCACCAGCGTGATCTACCAGGACAGCGTCATGACGACACTCTACCCTGTGACCACCGTGCCGCAGCTGAacaacacagagctgcagcagtACAGCATAGAGGAGAACGGAGGGGCGCCCTACACCAGCAAAGTTGGGGGGCGATGTCagcatcaccaccaccaccaccaccaccactctgGATATGGCGTCCTGACCACGGATAGCAATGAGGCCCTGGGAGTGGGACAGTGTGGCAACAAGCTGAACTCGGGGATTACATGCCAATATGAGGAGACGGACGCCCGCCTGATGCAAGGGGAGTTGGAGGGGAGCAAAGCGGAGGAGAAACACCTTTCTGAGAAGAGCCTTCACTCCCCCTCTTCTCCCTCCGCCCTCCCGGACCACCTCAAGTGCAACATCCTCAAGGCACAGATGGATGCTGCGTTCAGAGTGATGAGAGAAGAGGGCAGCCCAGATCCGCGCCGGAGCTCCGCCGGGCAGGAGCACAACGGCAGGTGTCCGGCCACTGCGCAGGAGACAGTGTCCTCCAGTTCAGCGACAGAAAAGAAGGCGGTTCGCCCGGCCCGGACAAAGAGACTGATCCGACAGTACAGCTTTAACCACAGCGATGAGGACGACCTGCCCGCCGCCCTGGCTGCCATCTCCTCCCAGAGCAGCACGGGCAAGACCACCTCTGAGAGCTCCTTCGACGTGCAGATACAGCCGCCCATCTGCCCCAAGAATTCAACTGAAGGCCCGGGGAAGATGTCCCTGGAGCCAGGAGATCTGTTAATGGACTTCACTGAAGCCACACCTCTGATAAAAACAGTACCTTCTGACCCAGCCGATCCCTATTATGATCCATTTCCATCTGTGCCACAATTCCCATTCAGCCAGGCAGAGTTGCAGGTGATGGAGTCTCGGCCGGTCTGCTGTGACCACCCCCTGTCTCCAGCCACACCCCTGCAGGTGTCCCCCCTCTGCCATGGGGCCCGGGGGGCAGGGGACCCAGGGCCTGGCCCCCAGGCGCTGCACCGCCACATGGCACCCCTGGGCAGCTGTGAGGCGCTGCGCCGAGAGCTGGACAGGGAGAAGCTGATGAAGAGACTCCTGATGACGGAGTTGTGACCCCGAGGAGGACACCCGCCCCCACACCCCCTCCTGTGTGCCTTCAGCCCGTTTACATTCCGATGCCTGCATATCAAAGAGCCTCCTCCCTCGGCTTCGACGGTTTtaggttgttttcttttacacacATGAGCACCAACACACGCAATCGCTGACGTTtgcacgcacgcgcacacacacacacacacacacacaaagacaagaGGTCTGGTGATGGTGTCAGCTGAGGAGGTGGCACTCACCTTTAATTGGCACCAAACAAATTGATGAAATGCAATTACAGATTGATTATGAAGATATGTTTTATGCCCCCCATAAAACTGTACAAATCTGCTTTGTCTGTAATGTCACACTGCTGCACCCTACTGTCATTGCCAAGGTGATTGTGTCATGTGACGTTGTAGGGGCAGATTCATGCAAGAAGAGTTTTGTGTGAGTAATCCATTTAgtcttaattgtgttttttcaagtCAACCTGTGTATTTAATTCAAGCAAACACATTGAGTTTTACTTGTTTGCAAAGAGCTTTAATGTGGAGAACAGCAGTGTTTGAGTGTAGCAGTATTACAGCGATGATGACTGCAGATTtagttgtcatttttgtttcattttgatttggtccagtcCTTTCATTTTTAACCGACACAAACATCAGACATCTTCAGCTGTGGAAGAAGGGTGAGTCTTGACAGAGGCTTGcaaacatcatttaaaaaatatatatatattttagtattcatgttaataaacatttaacttaacGTTTTTGTCATCTGTATTACTTCCGTGTAAAAAAGATGAcatcaatacatttgacaaCAAAACTaggttcttatttttattataattattatttgcattttgggGTTTGATTGAAGTTGTTAATGAGTTTTCCAAAGAACAGCAAAAGCAACAATAGAAAAGACGATGTCCAGTCTAGGTTTTGTATGGGGGGGGGtgcaaaaacacaagcagaacAACTCCAGAGTTTTTTGATTATGGGAAGGAAGttacttaattatatgtatgtgtgcagtgtttttaaccaaaatatatcatgtgatcttttttttttccctctcagtCAAGGGGATTGAGTGTGCTTTTTAGATGTATAAAAGGACATCGCTGTGTTTCACGATACGAAACTCTAAAAAGAGCACTTACAGGAAAGCTTGTGATTTCTGAAGCTCTTTACATCTAGCTGATACATATATACGTGGTCTAAACTTCGCAGGTTTACGCGATGCACAAGTTTCTGCATATGCATAGGACTTTATGGCTGAAAGTTTCACAGCTGTTCTTTTCTGAATTGGATGGCAGGCTAAGTGACATGTCCACTATGGGTTTTGTTGTTCTCTTGCAAAGCTGAGCACAGAAAGGGCAAGATTGagcctgcccccccacccccacacacacacacacacactgaacacagatAGGACAAGACTGACCCTGCACTGAGGGTGGAATGAAACCCTGAAGACACCGGCCCTTCAGAGGAGCCAAGAATGCACAAATTCGAAgcgatttgtgtttgtttgcgtTTGATTTTTCCGTGGCTCCTGAACGCAGCTGTGTCGCTATGCTCACAGTGTCAGGGTTGTCCAACAGCTGGGTCAGCAAAGTGTACAGATACGGGTGGAGGGGCGAGCCCAGAGAATCGGGCATGGTGAGAATTCGTCACTGGATCTTTTCATAGCCCAGATACCATCGACATATTTTAATCTGACTCAttataactaaatatatttattttttaatatttcaaaaatgtgttgtgCTTTTGTTCACTATGTGCTTCTGTACCAAATATCAAATGTTAACTAAGAAAAGGGGCAGATGTTATTCTTCTAGTTTTTGtttgggatttttattttggttcgtttgtttgttttctctcccaAAGCGTTTTGCTTTATCTTGCCGGTACTGGAGCCATCATGCTTTAAGCTAGATTTTAGAATTTGCTGTCATAGTGTTTGGAAAAAGGAACAAtgatcttatttttttgtatttgaccCATGTACAACAATCATAATGATCAGAATcagctcatttaaaaatgtcatttttatttcactgttgttGAGAAtgagagatttttttaaatggtacacAGGAAGATGTGTAAAAAATGAAGCAACATAATTTATAcgatttttaaacatatttacatgttatatatcgacattatatgcatttttcCATGTATTAACTGTACACTGtgctaaaatataaattttattgtattgtaaatagtttatgTAATACTGCTCAAACAGAGCTTATTTTCGCACATGGAACATTTTCCtaattgaattgtatattttacaggAAGAAACACTTTTAATACATGTGATATCTGCATCCGTTTCCACTTTACATGTGTACCCAGCGTGCTTTTACACGCCTGCTGTTCTCAGTCTGCTGCCAAACAGAACTTGAATCGCTCATTTAATCGATCGTTTCTTGAACCAGTGCAGAGACAAGTGAAGTCCTGTCTCATTAACACGTGGCAAAGATCTCTTCCAATCTCGTCTCCAACATGGCTGACAAGTGAAGAATGAGATGTGTTTAAAGCTGTCTATGTAGAAAGggattgaagaaaaataatgttaagaTGCACAAaactaatgtttttctttttctttttttcctttatatatattgcaaaaggTTCAAATCTGCTGAAGAGCCATTGTCAGATCTATGTGccaataaatgcattatttcctAATGGCCATATAAAGTATAAAATGCTTTGATGGGTCTATTTTGGTCGTTTGTTTAATATTTGGGACTATGAATGGATGGCTATTATGTCTCCTGTGTTCCTTCCAATCACACAGAGAACagagaacaatatatatatatatacacacacacacacatacagtggtTATAGGACATaatcacccccttggactttttcacattttgtattacagcctgaaattgtgatgcatttaaatgggaggcaagatattttttttaatataacaacagttaataaaaattaaacaaactgaaatgtcttggttagaaatgtattcaccccctttagtccatacttggtagaaccacctttggcagcaatcaCAGCTGTGAAGTCTTTGGGGGTgagtctctaccaggtttgcacaatATTTGCCCTTTTTCTGGCAAAATGGTTCAAGCTCTGTCCAGTTGGATGGGGTTGGTTGGTGGACAGAAATcgtcaagtcttgccacagattctcaatcacAATCAGGTCTAGGCTTTGACTGAGCCACGctaggacattcactttattttttagcCACTCAAGTGGTGTCTTGCTGGCTTCTCTGACTAATGCCAGTTCTGGGTGATGCCATATACCTTTCAGTGACTTGACTGCTCCAAGGATAATCAATcccttttaaatctttttatacCCCTCCCCGGATCTGTGCCTGTTCACATCTTTATCCCAGAGTTGTATTGAGAGCTTCTTGGTCTACATGGTAGTATGTTTACTTTGAATGCTCTGCCCACCTGTGGGAACTTAGATGTagatgtatttaatctgaaccCATGTTaaacacttttattgcacacagctGGACTCCATTCCGTTTATTGTGTGAAGGCAACTGGTTGCACCTGAACatatttaggagtgtcatagcaaaagggttaaatacttaattgatatatttttaacccCACATatctcccccccctcccacatTGAAAGTTTGGAGTAGGTTATGGATATCAAAAGGgggaaaatcacatttaaatgcatcaatatttCAGGTTGCAACACGACTAAATGTGAAATTGTCCAAGGTGGTTGAATACTTCCCATAGCCACTGTATGTGTACATGATCTTACATTATGGATGATTCAGATATGCCTATATGACTACAGTAGACAATAACAAACTGAACCCATGTATTTCAAGTGTAGGGGGTGTTCTCTTTGAACACTGCATTGCACAAATCTGATACACTATGATACCAAAAAAGGGGTTTTCTATCAATTTTATTCACTTACAGGACAACTTAGATCGCTTAGCTTTTGAATCCTTTTCTTTATTGTCATTTCTATACTCCTGACAGCCTGTAATTAATACTTTAGAAGCACCTGCAGAAAAAGCGTCCGTTTCAGTGCTAAGTCTCAGTAAGCAACTTGTCTTGGCTTCCTGGCTGCCTTTGCTCAAGGATGTCAAATTGTAAAATTCCCGTTTTTGCATCTTTTGTAAACATCGTATGTCCAGGGATTATCAGGAAACACCTGATGGCGGGTAAGTGCCAGGGTGACTCAAGTAAAGCAGTCAATCAGACTAGCTGTCATTCTCACAGCCAGTTACACTAGCTGCTTACTGGGTTTTAAACATGCTCTGAATATTCCCCCTGTAAAGAGTCATTTTAACCTAGAATGTGCTGTGTCTGACATAGGGAAGAAGACCATGGCGAAATCATCACTGAATCTCCATTATAAATCAACACACAGCAGTTAGTCCAACACACCATATTTCTGTAATGGTTATTGCACATAATGTCTCTCCCTTAACGTATGTATAACATGCAAACTGccttataaatacagtattcatCATTACCTATTTAAagtctgtattttattcatcATCAACCAAACTATGTTGATGTTTTATGTGAGTTAAAGGTAACGCCACATATATTTGGACACATTTGGACAGACATTCAGGTATGAAACTACATGAATCGTATTGTAAAtatcttgttttcctttccacCTTTTTTCTAAGTTTTCCCAAGTTAAACTTATGTTGTTGAACTAATGATGTTTGCTTTGAATGGAAAGTATACATACTGGGGATAAGTTGTAGAGAATTTCTATCATTTAGCTGGATGAACACTTTAAGGCATCCTACTGTATCAGCATTCTTCTACAACGGCATGATTTTTGTTGAGtcctgtaaaataataaaaacatatttgaag

Function

GO: NA

KEGG:

id description
K21111 EPB41L4B, EHM2, LULU2; band 4.1-like protein 4B

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002432 True 7226 mRNA 0.44 26 13885177 13939261

Neighbor

gene id symbol gene type direction distance location
AMCG00002430 galnt1,LOC107593713 coding downstream 91987 13788543 ~ 13793190 (-)
AMCG00002431 NA coding downstream 112868 13768415 ~ 13772309 (-)
AMCG00002427 galnt1 coding downstream 126258 13756885 ~ 13758919 (-)
AMCG00002426 galnt1 coding downstream 143783 13728610 ~ 13741394 (-)
AMCG00002428 NA coding downstream 193951 13678772 ~ 13691226 (-)
AMCG00002433 NA coding upstream 26849 13966110 ~ 13966467 (-)
AMCG00002434 NA coding upstream 51645 13990906 ~ 14043904 (-)
AMCG00002436 NA coding upstream 131524 14070785 ~ 14101399 (-)
AMCG00002435 NA coding upstream 188543 14127804 ~ 14151845 (-)
AMCG00002438 NA coding upstream 425794 14365055 ~ 14369820 (-)
G123027 NA non-coding downstream 393560 13487114 ~ 13491617 (-)
G123014 NA non-coding downstream 428118 13455085 ~ 13457059 (-)
G122991 NA non-coding downstream 472881 13411499 ~ 13412296 (-)
G122957 NA non-coding downstream 579582 13303152 ~ 13305595 (-)
G122956 NA non-coding downstream 582095 13302120 ~ 13303082 (-)
G123152 NA non-coding upstream 138983 14078244 ~ 14111201 (-)
G123175 NA non-coding upstream 603560 14542821 ~ 14543020 (-)
G123177 NA non-coding upstream 626986 14566247 ~ 14567067 (-)
G123178 NA non-coding upstream 647953 14587214 ~ 14588758 (-)
G123179 NA non-coding upstream 649548 14588809 ~ 14594542 (-)
AMCG00002421 sec61b,LOC102796100 other downstream 230930 13649227 ~ 13654247 (-)
G122862 NA other downstream 855771 13028197 ~ 13029406 (-)
AMCG00002368 rbm24b,rbm24,rbm24a,LOC106596654,LOC107601977,LOC106517771,LOC105905339 other downstream 1878825 11995828 ~ 12006352 (-)
AMCG00002351 NA other downstream 2012315 11869607 ~ 11872862 (-)
AMCG00002350 tmem240a,tmem240,LOC107687438,LOC108275582,LOC105898995,LOC107593924,LOC107673083 other downstream 2030286 11848470 ~ 11854891 (-)
G123263 NA other upstream 1001999 14941260 ~ 14946311 (-)
G123585 NA other upstream 2896895 16836156 ~ 16839722 (-)
AMCG00002503 NA other upstream 3018901 16958162 ~ 16974301 (-)
AMCG00002524 NA other upstream 3750747 17690008 ~ 17706289 (-)
G123829 NA other upstream 3983191 17922452 ~ 17989465 (-)

Expression


Co-expression Network