AMCG00002435


Basic Information

Item Value
gene id AMCG00002435
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 14127804 ~ 14151845 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002435
ATGAGGGACAAAAAAATACCCGTCACCGGCTTAAGAATATTACAGCACTTCAACACCTGCCCCGAGGAGTACACTGTGGTCTTCACTTCTGGATCCACCGCGGCCCTCAAGCTAGTTGCTGAGAGTTTTCCTTGGCGGCCTGCAGATCCCACAGAGCCAGGGAGTCTGTTTTGCTACCTGACAGACAACCACACCTCCGTAGTGGGCATCAGAGGGGTGGCATCTCAGTTGGGAGTACCAGCCATCCCCGTTCAGCTGGAGGAGGTTGAACAGACAGCGCAGGCAACATCTGAGACTAACGGGGCAGCCAGAGAGGGCAACCAGACTCCACATCTCTTCTGCTACCCTGCCCAGAGTAATTTCTCGGGCAGGAAGTACCCTCTGTGTTATGTGAAAGGGATCCAGTGTGGGAAGCTCTACCCCTCCACCAAAAAAACCGGCCGCTGGTGTGTGCTGTTGGACGCGGCCTGTTTGGCCAGCTGTTCCTTGCTGGACCTTCAGGCCCACCCTGCTGACTTTGTTCCCATCTCCTTCTATAAAATCTTTGGTTTCCCCACTGGTTTAGGAGCCCTGCTCATCCGCAATGACACTGCAGGCATCCTCAGAAAGGTCTACTTCGGAGGAGGCACAGCATCCGCTTACCTAGCAGGACAGGACTACTTTGTGCCGAAGGCCTCTGTTGCGAGCAGGTTTGAAGACGGCACAATTTCCTTCCTGGATATCATTGCGCTCAATCATGGCTTTGAGGCGCTGGAGGGGCTCACAGGTCAGTGCACAGAGCTCTCACAGCTTAGGGGTTATCAGTCATCCTGA

Function

GO:

id name namespace
GO:0043167 ion binding molecular_function

KEGG:

id description
K15631 ABA3; molybdenum cofactor sulfurtransferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002435 True 813 mRNA 0.54 3 14127804 14151845

Neighbor

gene id symbol gene type direction distance location
AMCG00002436 NA coding downstream 26405 14070785 ~ 14101399 (-)
AMCG00002434 NA coding downstream 83900 13990906 ~ 14043904 (-)
AMCG00002433 NA coding downstream 161337 13966110 ~ 13966467 (-)
AMCG00002432 NA coding downstream 188543 13885177 ~ 13939261 (-)
AMCG00002430 galnt1,LOC107593713 coding downstream 334614 13788543 ~ 13793190 (-)
AMCG00002438 NA coding upstream 213210 14365055 ~ 14369820 (-)
AMCG00002445 fignl1 coding upstream 528539 14680384 ~ 14682429 (-)
AMCG00002448 NA coding upstream 544553 14696398 ~ 14731127 (-)
AMCG00002447 NA coding upstream 609992 14761837 ~ 14787948 (-)
AMCG00002446 NA coding upstream 643242 14795087 ~ 14849774 (-)
G123152 NA non-coding downstream 16603 14078244 ~ 14111201 (-)
G123027 NA non-coding downstream 636187 13487114 ~ 13491617 (-)
G123014 NA non-coding downstream 670745 13455085 ~ 13457059 (-)
G122991 NA non-coding downstream 715508 13411499 ~ 13412296 (-)
G122957 NA non-coding downstream 822209 13303152 ~ 13305595 (-)
G123175 NA non-coding upstream 390976 14542821 ~ 14543020 (-)
G123177 NA non-coding upstream 414402 14566247 ~ 14567067 (-)
G123178 NA non-coding upstream 435369 14587214 ~ 14588758 (-)
G123179 NA non-coding upstream 436964 14588809 ~ 14594542 (-)
G123204 NA non-coding upstream 540125 14691970 ~ 14692999 (-)
AMCG00002421 sec61b,LOC102796100 other downstream 473557 13649227 ~ 13654247 (-)
G122862 NA other downstream 1098398 13028197 ~ 13029406 (-)
AMCG00002368 rbm24b,rbm24,rbm24a,LOC106596654,LOC107601977,LOC106517771,LOC105905339 other downstream 2121452 11995828 ~ 12006352 (-)
AMCG00002351 NA other downstream 2254942 11869607 ~ 11872862 (-)
AMCG00002350 tmem240a,tmem240,LOC107687438,LOC108275582,LOC105898995,LOC107593924,LOC107673083 other downstream 2272913 11848470 ~ 11854891 (-)
G123263 NA other upstream 789415 14941260 ~ 14946311 (-)
G123585 NA other upstream 2684311 16836156 ~ 16839722 (-)
AMCG00002503 NA other upstream 2806317 16958162 ~ 16974301 (-)
AMCG00002524 NA other upstream 3538163 17690008 ~ 17706289 (-)
G123829 NA other upstream 3770607 17922452 ~ 17989465 (-)

Expression


Co-expression Network