AMCG00002472


Basic Information

Item Value
gene id AMCG00002472
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 15838879 ~ 15923127 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002472
ATGGAGAAGGCGTTGGCCCTGGAGGACAGCTGCGGTTTGGGAGAGGACGTGAACTCCATGGTGTGGAGAGAAGTCAACTTCTGGAgcacagctTATCAGCTGTTGACGAGGGCCTGTCCTGGCCTGGAGACGAGAGGCTTCCTCCTGAGGGGGGGGCTGGGCGGCCCTGGAGCCAGGCTGGGGGTGATAAGCAGCGCCCAAGACTTTCTAGGAGCCCGGCCTATCAGATACCCTGAGTGGCTCTGGGACATTTTCCACTGTGACCCGCTCCAGATAGCCAGGCGGTTGTTGGAATGGGAAGCCATGCCTCCGCAGACCGCAGACAGACAGGATGAGTATGAAAGcgatgagagagagacaggggaacTGGAGTCTACGGTCCGCTATCTCTGGCTGATTCTGGGAGTGAGGGAAGGGCTGCTGATAGAGAGGGGGCCGGGGGTGCTTCGACCGGGCTGGGGGCTCGGGCTGGAGCCGGAGAGGGAAGACAGCCGggccccagcagcagcagcagctACTGTCACCTCAGATTATCAGTCTGCCGACAACTGCAGTGTTTTCTCCAGAGCTGATAGCTCGGCACTGTTGTGCAGACTGCAGCGCGGCTGGGAGGAGGCCGAGCGAGCAGGAGTGTGTTTCGCGAAGGGCCTTCTTTCTGCAGCCCTGCTTGATAAATATCCTCAGACGGTCCGGGTCTCCGAGATCGCTTCTCTGTCCAGCGTGAGGTCTCCCCCTTCGACGTATTCCATGACGAAGATCAAGTGCTCCTCAGTCTGGAAGGAGCCAAAGAAATTCACCAAGAAAGGGTGGTGCAGGCTGCTCACAGTCTGTAAGATGCTCTGCTCACACATGAGGCTGGGACGAGACAAAAGAAAGACCGCATCTGAGTATACATCTATAGACAGCTTGGGGCCAATCACAAGGGGGCAGCTCTTCAGCGTGGCTGCCTTCGCTGGAGGAGGATGTCGGGCTGTGGGTTTTGGGCAGCTCCTGTCCAGCACATTCCTCCATGCCGATCTGGAGGAGGAGTTTGAAGATCTGGAAGAGAATGAACGTCTGGAGGTCGAGTTTGAACGTCTGCAGAAGGAGGAGAATGAACGCCTGGAGATGCAGGAGTTTGAGCAGCTGGAGAAGGAGGTAGATGAATGGCTGGAAATGCAGGAGCTTGAAGACCTGGAGGAGTTTGAAGATCTGGAGAAACTTCTCGAAGACGGTTTAGACCCCAAACTCCCACAGCCAGATGTGACGGGGCAATTTCATTGTTGTCTGGAGGATTTCAAATGTGTCGCTGTTCTAGGGCGCGGGGCATTTGGAAAGGTGCTGCTTGCGGAGTCAAGAAGAACCACACAAAGATTTGCCCTCAAGGCCATTCAAAAAAGAGGGGTTGTTGACAGTCAAGATGTTAGAAGCCTCATGTGTGAGAGGAGTGTCTTACAGACTGTGAGCAGCGTGCACCACCCTTTCTTTGTGAACTTCTACGGCTCCTTCCAGACTGAGGAGCACTTGGTCTTCATCATGGAGTACGTCGCAGGGGGAGACCTCACGCTGGACGGAGAAGCGATCTCAGAGCCCCGGGCTGTATTCAGTGCTGCTTGTGTGGTGCTGGGGGTGGATTTCCTGCACAGGCACAACATCGCACACAGGGATCTGAAGCTGCCCAACCTGCTGATGGACAGACGAGGCTTCGTGAAGATTGCGGACTTCGGTCTGTGCAAGGAAGATATGGGTGTAGGTGACCGGACGAGTTCGTTCTGCGGGACTCCAGACTTCCTCGCTCCAGAAGTCCTGTCGGAGGAGTCCTACACCCACATCCATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002472 True 1818 mRNA 0.56 9 15838879 15923127

Neighbor

gene id symbol gene type direction distance location
AMCG00002470 NA coding downstream 1221 15823229 ~ 15837658 (-)
AMCG00002464 LOC107714420,LOC107697280,LOC107720166,LOC107661006,LOC107581689,LOC107551731 coding downstream 208790 15626198 ~ 15630089 (-)
AMCG00002463 crtap,LOC106588754,LOC103394375 coding downstream 222614 15607041 ~ 15616265 (-)
AMCG00002460 fbxl2,LOC107742856,LOC107706183,LOC107696556 coding downstream 304867 15508448 ~ 15534012 (-)
AMCG00002455 LOC102778215 coding downstream 476311 15338087 ~ 15362568 (-)
AMCG00002473 LOC107666842,LOC103361314,LOC100691736,LOC102304281,LOC102192906 coding upstream 18979 15942106 ~ 15950022 (-)
AMCG00002474 NA coding upstream 28106 15951233 ~ 15989035 (-)
AMCG00002475 eomes,LOC105012780 coding upstream 115274 16038401 ~ 16045090 (-)
AMCG00002477 NA coding upstream 206313 16129440 ~ 16154565 (-)
AMCG00002481 NA coding upstream 645209 16568336 ~ 16582900 (-)
G123405 NA non-coding downstream 43707 15790605 ~ 15795172 (-)
G123401 NA non-coding downstream 115742 15722933 ~ 15723137 (-)
G123385 NA non-coding downstream 149538 15687455 ~ 15689341 (-)
G123346 NA non-coding downstream 355163 15481144 ~ 15483716 (-)
G123204 NA non-coding downstream 1145880 14691970 ~ 14692999 (-)
G123452 NA non-coding upstream 201155 16124282 ~ 16127405 (-)
G123488 NA non-coding upstream 556902 16480029 ~ 16480293 (-)
G123489 NA non-coding upstream 558441 16481568 ~ 16483051 (-)
G123524 stt3b,LOC108412618 non-coding upstream 725280 16648407 ~ 16651454 (-)
G123527 NA non-coding upstream 730372 16653499 ~ 16654863 (-)
G123263 NA other downstream 892568 14941260 ~ 14946311 (-)
AMCG00002421 sec61b,LOC102796100 other downstream 2184632 13649227 ~ 13654247 (-)
G122862 NA other downstream 2809473 13028197 ~ 13029406 (-)
AMCG00002368 rbm24b,rbm24,rbm24a,LOC106596654,LOC107601977,LOC106517771,LOC105905339 other downstream 3832527 11995828 ~ 12006352 (-)
AMCG00002351 NA other downstream 3966017 11869607 ~ 11872862 (-)
G123585 NA other upstream 913029 16836156 ~ 16839722 (-)
AMCG00002503 NA other upstream 1035035 16958162 ~ 16974301 (-)
AMCG00002524 NA other upstream 1766881 17690008 ~ 17706289 (-)
G123829 NA other upstream 1999325 17922452 ~ 17989465 (-)
AMCG00002533 ulk4,LOC107704090 other upstream 2010337 17933464 ~ 18041573 (-)

Expression


Co-expression Network