AMCG00002476


Basic Information

Item Value
gene id AMCG00002476
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 16124380 ~ 16125822 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002476
CCTTTAACCACTGCTGCAAGGAGAGCGGCTTCCTCATGGTCTTAAAATGTCGAGAGCAGAACGCGGCCTTGAAGGAGTGCCTAACAACATActATAAGGATCCTGTGTTTTATGAAGAATGCAAACAGGAGTATTTGCAAGAAAAGGCAGAGTTTGAAAAGACTGGGATTcctacaaaaaaaagacaacagaaaCTTCCTACA

Function

GO: NA

KEGG:

id description
K18171 CMC1; COX assembly mitochondrial protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002476 True 203 mRNA 0.42 2 16124380 16125822

Neighbor

gene id symbol gene type direction distance location
AMCG00002471 NA coding upstream 151233 15970084 ~ 15973147 (+)
AMCG00002469 tbx20,LOC107719124,LOC107686728,LOC107600539,LOC107737833 coding upstream 189946 15922805 ~ 15934434 (+)
AMCG00002468 NA coding upstream 271895 15851347 ~ 15852485 (+)
AMCG00002467 NA coding upstream 303356 15797974 ~ 15821024 (+)
AMCG00002466 bbs9 coding upstream 401218 15714255 ~ 15723162 (+)
AMCG00002478 rbms3,LOC106588200,LOC107713827,LOC107600516,LOC107730162 coding downstream 144634 16270456 ~ 16336719 (+)
AMCG00002479 NA coding downstream 217276 16343098 ~ 16459211 (+)
AMCG00002480 NA coding downstream 409825 16535647 ~ 16570427 (+)
AMCG00002482 LOC102294068,LOC100692553,LOC101478849 coding downstream 495697 16621519 ~ 16651406 (+)
AMCG00002483 gpd1l,LOC108434205,LOC103034694,LOC105023484 coding downstream 610862 16736684 ~ 16750596 (+)
G123388 NA non-coding upstream 329231 15794408 ~ 15795149 (+)
G123386 NA non-coding upstream 434417 15689601 ~ 15689963 (+)
G123295 NA non-coding upstream 784211 15262949 ~ 15340169 (+)
G123197 NA non-coding upstream 1431604 14691981 ~ 14692776 (+)
G123171 NA non-coding upstream 1754467 14369093 ~ 14369913 (+)
G123468 NA non-coding downstream 360004 16485826 ~ 16489952 (+)
G123525 NA non-coding downstream 525720 16651542 ~ 16651964 (+)
G123526 NA non-coding downstream 527677 16653499 ~ 16654884 (+)
G123568 NA non-coding downstream 666278 16792100 ~ 16792799 (+)
G123653 NA non-coding downstream 966153 17091975 ~ 17148336 (+)
AMCG00002437 pcbp3,LOC108266078,LOC107657516,LOC107728912 other upstream 1762844 14327632 ~ 14361536 (+)
AMCG00002393 NA other upstream 2994683 13125378 ~ 13129697 (+)
AMCG00002388 NA other upstream 3053548 13044693 ~ 13070832 (+)
AMCG00002390 NA other upstream 3072409 13031759 ~ 13051971 (+)
G122746 NA other upstream 3983915 12133786 ~ 12140465 (+)
AMCG00002500 snrpd1,LOC105910057,LOC107655105,LOC107559756 other downstream 832339 16958161 ~ 16960082 (+)
AMCG00002496 NA other downstream 850466 16976288 ~ 16985906 (+)
G123807 NA other downstream 1789614 17915436 ~ 17984730 (+)
G123989 NA other downstream 2706192 18832014 ~ 18838531 (+)
AMCG00002562 LOC106579813 other downstream 2947871 19073693 ~ 19127947 (+)

Expression


Co-expression Network