Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00002512 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 17270581 ~ 17272452 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00002512 | True | 1265 | mRNA | 0.49 | 3 | 17270581 | 17272452 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002513 | NA | coding | upstream | 21829 | 17204463 ~ 17248752 (+) |
| AMCG00002506 | sh3bp5 | coding | upstream | 134061 | 17107399 ~ 17136520 (+) |
| AMCG00002507 | NA | coding | upstream | 168462 | 17095736 ~ 17102119 (+) |
| AMCG00002501 | NA | coding | upstream | 254335 | 17003048 ~ 17016246 (+) |
| AMCG00002502 | NA | coding | upstream | 277626 | 16987102 ~ 16992955 (+) |
| AMCG00002517 | NA | coding | downstream | 12619 | 17285071 ~ 17291512 (+) |
| AMCG00002511 | NA | coding | downstream | 50183 | 17322635 ~ 17353428 (+) |
| AMCG00002528 | atp2c1,LOC107592020,LOC107668304,LOC103369286 | coding | downstream | 117493 | 17389945 ~ 17415896 (+) |
| AMCG00002529 | NA | coding | downstream | 173468 | 17445920 ~ 17471292 (+) |
| AMCG00002526 | dync1li1,LOC107654754,LOC107706262,LOC107591989,LOC107688360,LOC107710339 | coding | downstream | 380023 | 17652475 ~ 17661173 (+) |
| G123653 | NA | non-coding | upstream | 122245 | 17091975 ~ 17148336 (+) |
| G123659 | NA | non-coding | upstream | 129146 | 17137413 ~ 17141435 (+) |
| G123568 | NA | non-coding | upstream | 477782 | 16792100 ~ 16792799 (+) |
| G123526 | NA | non-coding | upstream | 615697 | 16653499 ~ 16654884 (+) |
| G123525 | NA | non-coding | upstream | 618617 | 16651542 ~ 16651964 (+) |
| G123797 | NA | non-coding | downstream | 423408 | 17695860 ~ 17760195 (+) |
| G123808 | NA | non-coding | downstream | 654247 | 17926699 ~ 17940633 (+) |
| G123833 | NA | non-coding | downstream | 778560 | 18051012 ~ 18052338 (+) |
| G123916 | NA | non-coding | downstream | 1232436 | 18504888 ~ 18509774 (+) |
| G123943 | NA | non-coding | downstream | 1282033 | 18554485 ~ 18556562 (+) |
| AMCG00002496 | NA | other | upstream | 284675 | 16976288 ~ 16985906 (+) |
| AMCG00002500 | snrpd1,LOC105910057,LOC107655105,LOC107559756 | other | upstream | 310499 | 16958161 ~ 16960082 (+) |
| AMCG00002437 | pcbp3,LOC108266078,LOC107657516,LOC107728912 | other | upstream | 2909045 | 14327632 ~ 14361536 (+) |
| AMCG00002393 | NA | other | upstream | 4140884 | 13125378 ~ 13129697 (+) |
| AMCG00002388 | NA | other | upstream | 4199749 | 13044693 ~ 13070832 (+) |
| G123807 | NA | other | downstream | 642984 | 17915436 ~ 17984730 (+) |
| G123989 | NA | other | downstream | 1559562 | 18832014 ~ 18838531 (+) |
| AMCG00002562 | LOC106579813 | other | downstream | 1801241 | 19073693 ~ 19127947 (+) |
| AMCG00002561 | NA | other | downstream | 1857615 | 19130067 ~ 19133567 (+) |
| AMCG00002573 | NA | other | downstream | 2969396 | 20241848 ~ 20333030 (+) |
