Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00002522 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 17544840 ~ 17553514 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| K02906 | RP-L3, MRPL3, rplC; large subunit ribosomal protein L3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00002522 | True | 535 | mRNA | 0.47 | 5 | 17544840 | 17553514 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002519 | mrpl3,LOC107748644,LOC107688359,LOC107710340 | coding | downstream | 14606 | 17519005 ~ 17530234 (-) |
| AMCG00002518 | NA | coding | downstream | 120946 | 17416137 ~ 17423894 (-) |
| AMCG00002515 | pik3r4,LOC107556101,LOC107588487 | coding | downstream | 172878 | 17354650 ~ 17371962 (-) |
| AMCG00002516 | NA | coding | downstream | 236284 | 17307266 ~ 17308556 (-) |
| AMCG00002514 | NA | coding | downstream | 358932 | 17183401 ~ 17185908 (-) |
| AMCG00002521 | cpne4a,LOC108425151,LOC107710314,LOC107602385,LOC107654757 | coding | upstream | 5314 | 17558828 ~ 17572989 (-) |
| AMCG00002520 | LOC107710314 | coding | upstream | 45135 | 17598649 ~ 17606949 (-) |
| AMCG00002523 | NA | coding | upstream | 124508 | 17678022 ~ 17685297 (-) |
| AMCG00002530 | NA | coding | upstream | 285065 | 17838579 ~ 17857068 (-) |
| AMCG00002531 | NA | coding | upstream | 322491 | 17876005 ~ 17902810 (-) |
| G123705 | NA | non-coding | downstream | 306296 | 17234370 ~ 17238544 (-) |
| G123646 | NA | non-coding | downstream | 469291 | 17075312 ~ 17075549 (-) |
| G123642 | NA | non-coding | downstream | 494784 | 16995129 ~ 17050056 (-) |
| G123637 | NA | non-coding | downstream | 562194 | 16980831 ~ 16982646 (-) |
| G123527 | NA | non-coding | downstream | 889977 | 16653499 ~ 16654863 (-) |
| G123788 | NA | non-coding | upstream | 106553 | 17660067 ~ 17675110 (-) |
| G123824 | ctnnb1 | non-coding | upstream | 258004 | 17811518 ~ 17815466 (-) |
| G123845 | NA | non-coding | upstream | 497583 | 18051097 ~ 18052332 (-) |
| G123876 | NA | non-coding | upstream | 652154 | 18205668 ~ 18206132 (-) |
| G123926 | NA | non-coding | upstream | 915720 | 18469234 ~ 18469607 (-) |
| AMCG00002503 | NA | other | downstream | 570539 | 16958162 ~ 16974301 (-) |
| G123585 | NA | other | downstream | 705118 | 16836156 ~ 16839722 (-) |
| G123263 | NA | other | downstream | 2598529 | 14941260 ~ 14946311 (-) |
| AMCG00002421 | sec61b,LOC102796100 | other | downstream | 3890593 | 13649227 ~ 13654247 (-) |
| G122862 | NA | other | downstream | 4515434 | 13028197 ~ 13029406 (-) |
| AMCG00002524 | NA | other | upstream | 136494 | 17690008 ~ 17706289 (-) |
| G123829 | NA | other | upstream | 368938 | 17922452 ~ 17989465 (-) |
| AMCG00002533 | ulk4,LOC107704090 | other | upstream | 379950 | 17933464 ~ 18041573 (-) |
| AMCG00002584 | NA | other | upstream | 4093541 | 21647055 ~ 21678545 (-) |
| AMCG00002596 | NA | other | upstream | 4347778 | 21901292 ~ 21902597 (-) |
