AMCG00002531


Basic Information

Item Value
gene id AMCG00002531
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 17876005 ~ 17902810 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002531
gaggagaagaaagaacaCCCTGGAGAATGCTGGGCCGTTCCCGCAGCCGCCTACACTGTGCTAATGAGGTGCCTTCGGGAAGGGGAAGAGCCCACTGTCAATCACATGGCAGCAAAGATTGTGGAGAACGTCTGCACCACGGTCTCCTATCACTCGCAGGGCTTCCTCACTGCAGAGATTGGGCCCATGCTCTGGTATCTGTTCACTCACTCCACTGTGGATTCCTTGAGGGTCACTGCCATATCGGCGCTCTGCAGAATCACACGGCACTACGCCAGCGCCTTCCACAACGTGATTGACCAGGTGGGCTTGCCCGCCATCCTCAACAGCCTGGTGTGCGGAATAAGCCGCGTTCAGCAGCACATGCTCACCATGTTCTCCGCAGTGCTGGCGTCTGGGGTCCACTTGCAGAAACTGGTTCAGGAGAAGGACTTTGTTACAAAAATCGTCCGTCTGTTAGAGAGCCCCTCGCCAGCTATCCGGGCAAAGGCCTTCCTGGTGCTGCTACAGGTCATAATGAACAGCAGGGAGATGCTCCTCTTGTGCTGTAATTCCAGACTGGTGATGTACATTGAAAGAGACAGCAGAAAGGCTACGCCAGAGAAGGAACAACAAAGCAGCAATGAATACCTGTCAAACTGCCTGGACCTACTCATCCGTCACATTGTGCAGGAGCTGCCAGCAATCCTAGGCCGTAAACATCCATCAGCAGTCCAAGCAAAACAGCTGAAGCAGAGTCTTCCCATGATGGCTGTAGTGCTTCATCTTCTGACATCGCAGATATTTAGGCCCCAAGTGGTGACAGATGAGTTTCTCCTCAACTTTGGAGTGCTATTGAATCATATCAGATCTGTAGATTCTTGTGTGACCAGTTTGGAGAATGCAGTAGCCGAATGGCGAGTCTTCAGCTTACGGTTGCTGTCAGAAATCACACTGCTGCTGGTGAACCACGAGGCCGTGGAAAAGGGCAAGACGCTCGGTTCAAACAACAAACTTCTGTCTCTCATTAGAGAGTCCCTGCTTCCA

Function

GO: NA

KEGG:

id description
K17545 ULK4; serine/threonine-protein kinase ULK4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002531 True 1026 mRNA 0.52 9 17876005 17902810

Neighbor

gene id symbol gene type direction distance location
AMCG00002530 NA coding downstream 18937 17838579 ~ 17857068 (-)
AMCG00002523 NA coding downstream 190708 17678022 ~ 17685297 (-)
AMCG00002520 LOC107710314 coding downstream 269056 17598649 ~ 17606949 (-)
AMCG00002521 cpne4a,LOC108425151,LOC107710314,LOC107602385,LOC107654757 coding downstream 303016 17558828 ~ 17572989 (-)
AMCG00002522 NA coding downstream 322491 17544840 ~ 17553514 (-)
AMCG00002532 NA coding upstream 155722 18058532 ~ 18062065 (-)
AMCG00002536 trim71,LOC107657583,LOC107551222,LOC107723073,LOC107601676,LOC107704101,LOC107751884 coding upstream 269321 18172131 ~ 18182627 (-)
AMCG00002539 trim71 coding upstream 300567 18203377 ~ 18204483 (-)
AMCG00002537 NA coding upstream 312985 18215795 ~ 18224850 (-)
AMCG00002538 NA coding upstream 324158 18226968 ~ 18241221 (-)
G123824 ctnnb1 non-coding downstream 60539 17811518 ~ 17815466 (-)
G123788 NA non-coding downstream 200895 17660067 ~ 17675110 (-)
G123705 NA non-coding downstream 637461 17234370 ~ 17238544 (-)
G123646 NA non-coding downstream 800456 17075312 ~ 17075549 (-)
G123642 NA non-coding downstream 825949 16995129 ~ 17050056 (-)
G123845 NA non-coding upstream 148287 18051097 ~ 18052332 (-)
G123876 NA non-coding upstream 302858 18205668 ~ 18206132 (-)
G123926 NA non-coding upstream 566424 18469234 ~ 18469607 (-)
G123961 NA non-coding upstream 681899 18584709 ~ 18585930 (-)
G123981 NA non-coding upstream 879335 18782145 ~ 18782366 (-)
AMCG00002524 NA other downstream 169716 17690008 ~ 17706289 (-)
AMCG00002503 NA other downstream 901704 16958162 ~ 16974301 (-)
G123585 NA other downstream 1036283 16836156 ~ 16839722 (-)
G123263 NA other downstream 2929694 14941260 ~ 14946311 (-)
AMCG00002421 sec61b,LOC102796100 other downstream 4221758 13649227 ~ 13654247 (-)
G123829 NA other upstream 19642 17922452 ~ 17989465 (-)
AMCG00002533 ulk4,LOC107704090 other upstream 30654 17933464 ~ 18041573 (-)
AMCG00002584 NA other upstream 3744245 21647055 ~ 21678545 (-)
AMCG00002596 NA other upstream 3998482 21901292 ~ 21902597 (-)
G124719 NA other upstream 5183184 23085994 ~ 23296115 (-)

Expression


Co-expression Network