AMCG00002533 (ulk4,LOC107704090)


Basic Information

Item Value
gene id AMCG00002533
gene name ulk4,LOC107704090
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 17933464 ~ 18041573 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002533
CGGCTGGCTGTCGCGGAAATAGAAGGAGTATTGAGTGGAGAGGTTACCAGACTTGTGGTGCATGAGGGACCAGATGGAGTCAAAGAGGAGGAGGGCGAGGGGCCGGGGCCCTTTGCGGTCACCTTCGAGGGGCTTGACGATCTGCAGCTTCTCGGGCAGGTAGGAGCGGCTGCTGAAGGAGAAGTACGACAGGCCGGAGTGGTGCGTGCCCAGGGACATGATGCTGTCGGTGGGCGTGCGGCTGCCGCTGTAGATCTCGCCCTTCTCGGCCAGGTCTCGCAGCTTCCTCTCGCGGTCCTCCTCGAAGAAGCGCCGCTCGCTCAGGTAGTTCTCGCGGCGCAGGGACAGCCGGCGCAGGGCCATCTCCAGAGGCTGGAGCGGGGCGTGCTCATGCAGCTGGAGAGAGCCGAGTTGAGGGATGAGGACTGGTTGGAGCCCGGGATGTTCATGGGAGAGGGAGCCAGGGACCTCTGCTTCACTATCGACAATCTGAGACAGCAGACTCTAGCACCACGAAAAGCTACAAAAGAGAAGCACATGAGAAGAATGCTCCCCTGCCGCCTTAGTGATCAATATTCCCAGCATCACCTGCTGCAGTGTTGCATCAGCGTGGAGGCGCGCGACCATGGGACAGCTGCTCAACATCTGTGTGCCGTGTACACTTATGGTGAGGTCGATATTGGCATCGGGAGAAATGAGCGGGGGTGCAAAAGGAAAAATCTGGTTGCCGTGGAAACTAGAAGGAATGACTGCAATCCTGACGTCAGCCAGAAAGCACAGGGCTGCCTCACTTACATACTGCTCTTCCCCGGAGCCCGGTCCGCAGGCTGGCAGTGGCTCAATGCTTGGAGCAGAAGGGGGCAGGGTGGTGGCCGAGGTGTTGTGGTGCAAAGCTGTGGCGTCCAGCTTGGCAGCTTTCACAGGGAAGCCCAATGTGCCATGAGCGGGGCCAGTGCCGGAGATGGAGGCAGGCAGGCCGTGGGGCAGCCCTGGATCTCTGGCACTGCGGACTGGCTCCTCTCACCttatGACAGGGAGTGGTGTAGCTCTGTACTGCAGGATTTTCACAGCCTGCCTGCCGCTACAGTGCAGTGCATGTTGatcacCAAGAGAATATCAAGACTTTGCCACAAGATCAAGACTGGTTCAGCTTACAAAACCAGTGCAAACCctataaaacaaactgtggTGGGCAGTGACGTCATGCACAGTGcagcagagggacagagagagagagagagagagagaggggactaTGGCGAAATAAGCGTGCAGTGGAATCGACCGGCTTCTCATTACAAGCAGCTCTATACCAGGCGCATCTGCGGTATGGAAAACTTCTTTCTATATGAAGAAATCGGAAGAGGGAGCAAGTCAGTTGTGTACAAGGGGAGAAAGAAGGGAACAATACACTTCGTAGCAATCGTCTGCAGTGACAAATCCAAGAAGGCAGAGCTAACAAACCATGTACGCCTTACCAATGATATAGCACATGAgaatattgtttcctttcatgaGTGGTATGAGACCAGCAACCACCTTTGGCTGGTGGTTGAGTTGTGTACT
>TU155254
taTGGCGAAATAAGCGTGCAGTGGAATCGACCGGCTTCTCATTACAAGCAGCTCTATACCAGGCGCATCTGCGGTCAGGAGGACATCGCAAGGAGTGTTTGAAAGCCGTGTTGCCCTCGTCTCTCTCTGCCCTCGACACACTGCTGTGTCCACACGGGTCAGTCCGCCGTCGTGGAGGCGCGTCGGGTTGCGTTGCGTTGCGTTGCTGCTCCATATACAGGATCCCGGCTCCTGTCGTGTGCAAAGTTTCCCCCGTAAACCTTGTGCACTGGACTCTATTACACCGCATGTGCAACCATTTTCACAGCTGCAGTGTCGGCTCTGTGGAACTGCTAGCTTTGGGCTGCAGTGAGGCGGTGTATCACTATACACTTACAGCTGAGGGGGTGAAAGACAGGAAACCTTGCCTTGTCAGGACAGCGTTATCAGTGCACGATCTGGGGAGAACAAAATACAACTGAAACAATACGGCAAGTCGCAGGAGCGGTTTACGACGGTGGAAATCGGCATCATTGGGAGGATTTCCCTTCATCAGCAGGACCTCGATTGATTTGGTAACCAGGCAACTGAGCAATTCTCCGTTCGCCAGAGGAGACGAGTGCTATAGCAGGAGCTCTGTGGGGATAAAGAAGGGGCACATTTCTCTTCAATACAGTTGTGCGTTTCAGTCTTATTCAAATATCCTGCCACAACAAGGTCACAGATGTTCAGAGCACTTTGAAATGATTGTCATTAACGAATGGCTAATTCAGTGATAAACAGTCCATTGCTTTTTAATCATAACACTGCCTGTTGTGGCTGAAGCATgcccaaattattattaaaatcattaaaaaaataaacagttgaaTTCCAAATTGAATGGTTTAATTATTCTTATGATTCTGTTTACAGAATGCTAGATGGAACAGAATGCTAGACTAAAACTGCCTGAACAGTCTGTTGatcttagttttatttatttatttataaaggtCAAGTGTCAtccataaaacatacaaaaagaaaaaacataaccaATTCAGATCAGTGACACACACTGTACTTCCTAGATGATCCGACAGCATGCAATGAAGCCCCTACAAGGCTATTTATCTATACAGCCCCTTCCCACAATTTAAATCCAATACTGTGCAAGTCCATATGAGATTCTGACCAGAAGGGAGCTTATTAGAGATCAAGACAAAAAGGACCCGCCGTTTCATTAACCACATCACCAGCCCAGACTGAATCGATTAACCCCCCTTTTTATTGTACAATCAATAGAGATCCTTCCTTCAGTTCCCTCAGGATCTCAGTCATATTTCTCTTGAGTGTCCCACTGAACTAGATTTGACTGTGTAATGATATTCAATTATATACCTATTTTCTACCTCAGCAAAATCTTCTTATTGATTAACTAAATAATAACTAATTTCATCTGggtagtttttttaaatctaaaaaaaaaagttacttgAAGGAACTACGAAGATGTATAGTCAGGGCTTTGTAAGAAATCTAGAAACAAGACATGACTCTGCAACCTCAACACTGAAGAGACTGAGAAGAAACCCCAGATATAAATCACTGACCTTTCTGTCTGATATTGAAGAGCACATA

Function

symbol description
ulk4 Predicted to enable ATP binding activity and protein kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human ULK4 (unc-51 like kinase 4).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002533 False 1566 mRNA 0.56 12 17992061 18041573
TU155254 True 1602 lncRNA 0.43 2 17933464 17994763

Neighbor

gene id symbol gene type direction distance location
AMCG00002531 NA coding downstream 30654 17876005 ~ 17902810 (-)
AMCG00002530 NA coding downstream 76396 17838579 ~ 17857068 (-)
AMCG00002523 NA coding downstream 248167 17678022 ~ 17685297 (-)
AMCG00002520 LOC107710314 coding downstream 326515 17598649 ~ 17606949 (-)
AMCG00002521 cpne4a,LOC108425151,LOC107710314,LOC107602385,LOC107654757 coding downstream 360475 17558828 ~ 17572989 (-)
AMCG00002532 NA coding upstream 16959 18058532 ~ 18062065 (-)
AMCG00002536 trim71,LOC107657583,LOC107551222,LOC107723073,LOC107601676,LOC107704101,LOC107751884 coding upstream 130558 18172131 ~ 18182627 (-)
AMCG00002539 trim71 coding upstream 161804 18203377 ~ 18204483 (-)
AMCG00002537 NA coding upstream 174222 18215795 ~ 18224850 (-)
AMCG00002538 NA coding upstream 185395 18226968 ~ 18241221 (-)
G123824 ctnnb1 non-coding downstream 117998 17811518 ~ 17815466 (-)
G123788 NA non-coding downstream 258354 17660067 ~ 17675110 (-)
G123705 NA non-coding downstream 694920 17234370 ~ 17238544 (-)
G123646 NA non-coding downstream 857915 17075312 ~ 17075549 (-)
G123642 NA non-coding downstream 883408 16995129 ~ 17050056 (-)
G123845 NA non-coding upstream 9524 18051097 ~ 18052332 (-)
G123876 NA non-coding upstream 164095 18205668 ~ 18206132 (-)
G123926 NA non-coding upstream 427661 18469234 ~ 18469607 (-)
G123961 NA non-coding upstream 543136 18584709 ~ 18585930 (-)
G123981 NA non-coding upstream 740572 18782145 ~ 18782366 (-)
AMCG00002524 NA other downstream 227175 17690008 ~ 17706289 (-)
AMCG00002503 NA other downstream 959163 16958162 ~ 16974301 (-)
G123585 NA other downstream 1093742 16836156 ~ 16839722 (-)
G123263 NA other downstream 2987153 14941260 ~ 14946311 (-)
AMCG00002421 sec61b,LOC102796100 other downstream 4279217 13649227 ~ 13654247 (-)
AMCG00002584 NA other upstream 3605482 21647055 ~ 21678545 (-)
AMCG00002596 NA other upstream 3859719 21901292 ~ 21902597 (-)
G124719 NA other upstream 5044421 23085994 ~ 23296115 (-)
AMCG00002629 sqle,LOC106579093,LOC102798444,LOC106605546 other upstream 5140348 23181921 ~ 23192656 (-)
G124829 NA other upstream 6219992 24261565 ~ 24261823 (-)

Expression


Co-expression Network