AMCG00002537


Basic Information

Item Value
gene id AMCG00002537
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 18215795 ~ 18224850 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002537
TATGTAGGTTACGTTGGAAGTAGCCGATGGTATTTGCGTCGCAGTTTTGCTGCTGCATGTCTTGCAGTGTAATccgttgttgtgtttgtttagaccgtagacacaaacaaacacatagaaACATCTCGACGTTCCGCAAACACATCTAGTGTAATGTCACACTTCCTGTAATGATGATTGGTCTGTGATTTTGTGCAGTCGTGTGTATACTTGTGCAGTCCAGTATAGACCCATCTCGTTGGCTTTCAAGGGGTTCAGCTATTTTTACTGTCCACTCCCATTTCTAGGCCACAATGCAACAGCTGAGGAGAGCGCACAACAAAGACCACTGttgtttgattgcttttttGAGAAGAAACCCTACACCCGTGGATGTCCAGATTTAGACGCTGTGTGTGATGTCTGTGACCTGCTTCTTGCGACATGTGGCAAGGGTCACTTCAAACAGTCATATTGCTGTGCAGGTCTTCCAGAATCGATTGCTGTCAGGGGCAGATGCAGTCAATGCGTTGCGACCCTTCTACTTTGCAGTGCATCCAGATTTCTTTGGCCAGCACCCAAGGGAAAGGGAGGTGAATGAAAACTCGCTCAAGAGGCTGAATGGATATATAGAAAACCTTCAGAAGCCAAACTTACAGCACCTCAAACCAACCCAGCTTACATTTTATGTCAGAGAAACAGTGAATGAAAAGCATGGTGTTAAACCTGAAGTTCTTCCTTCAGGGTTTCGGGCCGTCAGCTTCACGTTGCAGTCGAGGGATATTCGAAGCACGGTACTGGATGTTCTCACGTCCTGCAGCTTACCAACAGAGCACATGCAGGCCTTGAGTGCCAGCGTTGACTCGCCCAAGCAGACGCATGTGGCCGGAGAGCCATTCTACAGACCCATCCGATGGGACAAGACTTATTACTCGTTCACCGGATTCAGGGACCCTGAGGAGGATCTGGAGAAGGCCAAGAGAGTGGAAAATACGCTGAGCTCCTGGTTGAGCAGTAATGAAGCCAGTGCCACAAAGAAGCAGAAGGACAGCCTACCCCACCGTGCTGAACTGAAGAgattgaaaaaaatgctgtgccACAAACTGAGGCTTGCAGACATAAGGTGGCAGCGTAGCTGGGGTATTGCTCACCGGTGTAGCCAGTTACACAGTCTGAGCCGTCTGCATCAGCAGAACCCAGAATCACTTCTCAATGTTGAAGGGCATACAATAATATTCACTGACCAATCAGGAATGAATGCTGCTGGTCATGTGATGTTGGGAACAACAGATGTTCATCATCAGTGGGCCAAACTCCTGGGGGGGATACAGGTGATCCACATCGAGAGACTGCAGCCCCTGCTAACGATAGAGGAGTACTTCAATACCTTGAGCGCCTTTCAGAAGAGGCTCTCGTCCTGCTGGGTCCCCTTCCACCCCCGGAGCCTGCAGGGACTACAGATGACCCTGGAGAACGACCGCTCCAGCCCCCGCCTGCACGAGCTGGGCCACTTCATCATCCCCTCGGCCTGCGAGCCCACGACCCTGCAGTGGTTCATTCAGACCAAAGCACCGGAGGCCCGGCGCAGGATGAAGAGAAGAGACGAGCTAGAAGCAGAGGAAAATGACCTGGTGCTGTACTGCTTGGAGAGTCTGTCCTTGAAACGGTTGTACAAGGAGCCCAGCGTGAGCAGCAAGCAGATGATACCCTGCTGCCGGAGGCTGATGGAGGAACGCTGCCCCTACGTGCAGGGGATGCGTCTCTGTGTCTCGCATTTCTACTCTGTCCTGCAGGATGGGGACCTCTGTATTCCCTGGGACTGGAAGAGCTGAGGAGGTCGACTGGGTCAGCGGCTGACATATTGTAGGACAGCTTCACAGTAGGGAAGGAGGAAGCTGGGGAAACTATaaagcactttattattttatgattagaGGCAGAAAAAAGTATAGGACCACAAGTTTTAGCTTCATAAGATatgcaaacaaaaatctatataCTATCTAAGAAGAAAACCATAGAAGCATACGtactatacatatgtatatatgttttttgtacagCACAATGatatattaaagtattattaactattaactGGGGGCAGCCAATTCTGCTAGGTGTTTCTATAGcttcaatataaatgttatgtatGTTACTTCTTAGATGGAACGTTTTATGCAGTATTTACAATCAAGTGGCAGaccatatttcagttttttgtagaaaatgtaatttgaaatcaatatgtaataaaaacagtgaTATGATCTATTTGCTTAAGATCTGCGTGAATTCTAAATTCTGCGAGTGTTCAGAGGTGTTCGGTTTTAGTGCAACATTATTGAAGGCACTGTTCATGCCAAAGACAAAGTCACAGGATCCGAGGATCAGAGTGGGTTTTACTGTTTGGTGCAGTGTTTGTGGATTTGTTCTCTTGGTTTTCTTGTCCATTTCCCGGACGATAATTATATTCTTTCCAGTTTTGTAGCTTTGGATAAACAATCCTCCTTGCTTAGCAGCGTGTCATAAACTGATAACAatttttgaagaaaatatatgaataatttagtttaaatttgAAAGCACTCGTTAAGACCTCACTAGGGGGAGCTGTTCCCATACCCATAGAGTGCtcttgtatgtaaaaataaatgggtGATATTCAATCTTCTTCGTTTATAGGCCATCCCTCATAAATAGTATCAGTGACACTATATGAGTGAAGTCATCCTATCCTGTGTGCATGTCTCTGAAAGTAATACccgttttgtttatttactgtcTTTTATAACTGTCAGTGTGTTAGCAGTATAAGGTGTTACTGCTTTTCCCTTAAATGAATGACAGCTCATTTCACTGTGGGACTTCCTCTTGCATTTTGTTATGCATTTAGAACCAGCGCACTAAAATTGAAACTGGTAGGTGTAAAGTGTCTCAAAAACTTCCTGAGAAACAGGAAATCTTATACATAATGTCAACGCACACATGAAAGGTTATATTTAACAGTCACAACATTGCTGAGTTTAAAAGCTGTGGGAGAGCCCTCTGAAGGGGTTTATCTTGTTTTGTACCTTTGTTGAGAGCATCAGTCAAGCTTTGTATTGGAACCAAGATACAATCGATGGATCAGGTGTGTTTTAGAACAATTATCCCGATGTTTTGGCCAATAACTAATGGTCAAGCCAAGCATCGTTTTTCCGTAGGAATTATAATAGGGTACATGACCTACTAATCTTATTTACTGTGTGACTGTTTATAACCTCATAATTTAACGTACCGATCaaagaataatcaaaatgtttgGAAGCTGTATCAATAAAGCTATGTTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002537 True 3314 mRNA 0.44 10 18215795 18224850

Neighbor

gene id symbol gene type direction distance location
AMCG00002539 trim71 coding downstream 11312 18203377 ~ 18204483 (-)
AMCG00002536 trim71,LOC107657583,LOC107551222,LOC107723073,LOC107601676,LOC107704101,LOC107751884 coding downstream 33168 18172131 ~ 18182627 (-)
AMCG00002532 NA coding downstream 153730 18058532 ~ 18062065 (-)
AMCG00002531 NA coding downstream 312985 17876005 ~ 17902810 (-)
AMCG00002530 NA coding downstream 358727 17838579 ~ 17857068 (-)
AMCG00002538 NA coding upstream 2118 18226968 ~ 18241221 (-)
AMCG00002542 NA coding upstream 95289 18320139 ~ 18335125 (-)
AMCG00002541 snrk,snrka,LOC107551216,LOC107723077,LOC107601674,LOC107657578 coding upstream 158970 18383820 ~ 18389641 (-)
AMCG00002543 snrk,LOC107101967 coding upstream 201874 18426724 ~ 18427338 (-)
AMCG00002544 NA coding upstream 257883 18482733 ~ 18492180 (-)
G123876 NA non-coding downstream 9663 18205668 ~ 18206132 (-)
G123845 NA non-coding downstream 163463 18051097 ~ 18052332 (-)
G123824 ctnnb1 non-coding downstream 400329 17811518 ~ 17815466 (-)
G123788 NA non-coding downstream 540685 17660067 ~ 17675110 (-)
G123705 NA non-coding downstream 977251 17234370 ~ 17238544 (-)
G123926 NA non-coding upstream 244384 18469234 ~ 18469607 (-)
G123961 NA non-coding upstream 359859 18584709 ~ 18585930 (-)
G123981 NA non-coding upstream 557295 18782145 ~ 18782366 (-)
G124068 NA non-coding upstream 1059028 19283878 ~ 19284293 (-)
G124175 NA non-coding upstream 2077222 20302072 ~ 20334454 (-)
AMCG00002533 ulk4,LOC107704090 other downstream 174222 17933464 ~ 18041573 (-)
G123829 NA other downstream 226330 17922452 ~ 17989465 (-)
AMCG00002524 NA other downstream 509506 17690008 ~ 17706289 (-)
AMCG00002503 NA other downstream 1241494 16958162 ~ 16974301 (-)
G123585 NA other downstream 1376073 16836156 ~ 16839722 (-)
AMCG00002584 NA other upstream 3422205 21647055 ~ 21678545 (-)
AMCG00002596 NA other upstream 3676442 21901292 ~ 21902597 (-)
G124719 NA other upstream 4861144 23085994 ~ 23296115 (-)
AMCG00002629 sqle,LOC106579093,LOC102798444,LOC106605546 other upstream 4957071 23181921 ~ 23192656 (-)
G124829 NA other upstream 6036715 24261565 ~ 24261823 (-)

Expression


Co-expression Network