AMCG00002545 (rpl14)


Basic Information

Item Value
gene id AMCG00002545
gene name rpl14
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 18504897 ~ 18508670 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002545
ATGCCCCCTCAAAGTATAACCAGAGTAAAGACAAAGCTGACAGTCTCCTCAACTGCCTTTCTGTTTCAGGTGTTCAAGCGTTTCGTCGAGATTGGCCGGGTTGCCTACATCTCCTTTGGCCCCCATGAGGGCAAATTGGTGGCCATCGTAGATGTCATTGACCAGAACAGGGCTCTGGTAGATGGCCCTTGCACTGGTGTGAAGAGGCAGTCCATGCCTTTCAAGTGCATGCAGCTCACCGATTTTGTCATCAAGGTGCCCCACAGTGCTCGTCAGAAGTTTGTGAGGCGGGCCTGGGAGAAGGCTGGTGTTAATGAGAAGTGGGCTCAGAGCAGCTGGGCGAAGAAAATTGAAGCCAGACAaaagAGGGCCAAAATGACAGACTTTGACCGATTCAAGGTGATGAAGGCCAAGAAGATGAGGAACAAGATCATCAAGCATGAGGTGAAGAAGCTCCAAAAAGAAGCCCAGAAAAAGGCATAAACTCTTCATTTGACAATAAAATATGGCTAATAAATTGTAGTTTGTGGTATTTTTAAgtgagtttttccttttttataccATTCTAAAATTGCTGAGCTGAGTTCCTGTTCAGTATATTGGATAGAAAATGAGGCTGTTTAATGGGACATTTGTACATTGCTGTTCTAGGACAAGTGACTTAATGTTTATTATagctttacataaaaaaaaagtaaatgtatgtgAAAGTGTTGCTTTGGTTTAAGAGCACTGATGGCCATGTCTTGTGCATCAACCCCACACTGTTAACGGGAGGTCAGATGTGCAGAAAGTTAAAATATTGTAGCTTATGATTTCTTGCAAATGAAGAGCTGTAGTTTCCTTTCAGTATTAAAGAGTAAAACTAAGGTTCATCTCACCTGGTGGTGCCTAAAGTTTGggtattaaaatgcatttcaagacaCTGAATGCAAAAATAGGACACGATTGGCACAATTTCTCTCAAATCCTATGTACTTGAACATTTACGAACATTCATCATCTTGAGGTTCTCGGCCAAAGATCCAGGCTGTGTAATCAGCTTCATTGTTTTAATCACAGCTGAGATGTCAAAAGGTTTGTTTCAGAGTTTAAAGGCTGGTGTACAATTTGGTAGTCAGACATGAGttaggtgtgtgtgtagatgATCATTAAGGGTAATGTGCCTGTGACTTGTTTTCTTGTGAAATGTCTGAAGTATGAGGTCCCCATGGACAACGTATAATTAACGAATTTCCTCGGCTGTTTCTCATGGGACTTGCTTTTAGGCTTTGTACAATTTACAGTTGCAATGAGCggataattacttaattaggGCGTGGGGCGAGCTGAGCAGGGGATCCCAAGTGGCACTTTTCCAGCAGTGAGATTTTATGGAGACTGtgaaactacattttaatttccttttaattaagcCACTAGATTTCCACCTTACATTGggattgttttatatatgtattttctttcccctaTAAAGGTAGTGAGTTTGGTTGCTTGTAGAGATGGCTGGTATGGGGGATTCTTTCATCTCCACACATGACATGATAAATGGTGCAGGTCAAGCATAAATACTTTGGAAATTGCATAGGATTAAAACCAATTGTTAATAAACAGGGACATGTTCTAGCAGGCTGGTATATTGGGAACCCCAGGAACCAACAAAAAGTTTTGCCATATTGGAATTTGTTTTGTGCTCAAAAGTTAgatgaacatgtttattaatgaCTACGACATTCAggtgaactaaaaaaaaactactgggcattttgaaatgcattactcTCACTGTCCAGGGTCAggtttggtttttctttttacaattcCCTTTATGCTAAGTAAAAGAGTGCATGTGATTGTCAGGTTGCCTGCCTAAAAACATGTGACTACTGTGTACATTAATGAATACCTTGTATtgagtatttaatttaacaagaatccttttaataattgaatgctaAAGTATGTTGGCTTGTGTTTTGGTGTGGATTtcccttttttgtatttgtctgaaGTTGTGAAAGACCCCAAGCTTGAGTCTTTATAAGGGATAGCTTTATCAATTGTTCCCACAGGGATAGTCAACTTATCAGCCCTGGTAAATGCAGGGACGGTTGCCAGAACCTTGTGGAAAGGCTTAGAGcagaacaaaaatgcattttgctgaAGCACAGCTCCAAGATGGAAAGTCAACGGAAACCTTTGCAGTTTGCATCAGCAGAGCAGGTGAGGATTTCTGTTGAGGCCATTTTACATAACTACCAAATAAAGAAAGGCAGTG

Function

symbol description
rpl14 Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in ribosomal large subunit biogenesis. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Human ortholog(s) of this gene implicated in systemic lupus erythematosus. Orthologous to human RPL14 (ribosomal protein L14).

NR:

description
PREDICTED: 60S ribosomal protein L14 isoform X3

GO: NA

KEGG:

id description
K02875 RP-L14e, RPL14; large subunit ribosomal protein L14e

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002545 True 2278 mRNA 0.40 5 18504897 18508670

Neighbor

gene id symbol gene type direction distance location
AMCG00002544 NA coding downstream 12717 18482733 ~ 18492180 (-)
AMCG00002543 snrk,LOC107101967 coding downstream 77559 18426724 ~ 18427338 (-)
AMCG00002541 snrk,snrka,LOC107551216,LOC107723077,LOC107601674,LOC107657578 coding downstream 115256 18383820 ~ 18389641 (-)
AMCG00002542 NA coding downstream 169772 18320139 ~ 18335125 (-)
AMCG00002538 NA coding downstream 263676 18226968 ~ 18241221 (-)
AMCG00002549 NA coding upstream 19983 18528653 ~ 18545075 (-)
AMCG00002550 NA coding upstream 46128 18554798 ~ 18572982 (-)
AMCG00002547 grb10,LOC106605415,LOC106579904 coding upstream 77408 18586078 ~ 18602108 (-)
AMCG00002552 NA coding upstream 120979 18629649 ~ 18632830 (-)
AMCG00002548 NA coding upstream 193225 18701895 ~ 18713091 (-)
G123926 NA non-coding downstream 35290 18469234 ~ 18469607 (-)
G123876 NA non-coding downstream 298765 18205668 ~ 18206132 (-)
G123845 NA non-coding downstream 452565 18051097 ~ 18052332 (-)
G123824 ctnnb1 non-coding downstream 689431 17811518 ~ 17815466 (-)
G123788 NA non-coding downstream 829787 17660067 ~ 17675110 (-)
G123961 NA non-coding upstream 76039 18584709 ~ 18585930 (-)
G123981 NA non-coding upstream 273475 18782145 ~ 18782366 (-)
G124068 NA non-coding upstream 775208 19283878 ~ 19284293 (-)
G124175 NA non-coding upstream 1793402 20302072 ~ 20334454 (-)
G124222 NA non-coding upstream 2031637 20540307 ~ 20540523 (-)
AMCG00002533 ulk4,LOC107704090 other downstream 463324 17933464 ~ 18041573 (-)
G123829 NA other downstream 515432 17922452 ~ 17989465 (-)
AMCG00002524 NA other downstream 798608 17690008 ~ 17706289 (-)
AMCG00002503 NA other downstream 1530596 16958162 ~ 16974301 (-)
G123585 NA other downstream 1665175 16836156 ~ 16839722 (-)
AMCG00002584 NA other upstream 3138385 21647055 ~ 21678545 (-)
AMCG00002596 NA other upstream 3392622 21901292 ~ 21902597 (-)
G124719 NA other upstream 4577324 23085994 ~ 23296115 (-)
AMCG00002629 sqle,LOC106579093,LOC102798444,LOC106605546 other upstream 4673251 23181921 ~ 23192656 (-)
G124829 NA other upstream 5752895 24261565 ~ 24261823 (-)

Expression


Co-expression Network