AMCG00002551


Basic Information

Item Value
gene id AMCG00002551
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 18723397 ~ 18759586 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002551
ATGAAGGCTCGAGCCCCTCCTCCACCTGTAGCTCCCCAGCCGGCTCCGCGCAGGATCTTCAACGCAGCCAAATCCGCAGGGCAGGGCGGCACTGAGGCCAAAGAGAACGTCCTGCGCCAAACTGTGGGCCTTCTCATCACTCTGCCATCGGGCTTCCAGACCACAGACACCGTGAGCGGAAgCAAGGCGCTTATGGACATGCTTGTGGATCTGTGCAGCCAGTACCATTTAAACCCAGCCTACCATACACTTGAACTGCAGTCTCCTGAGGGTGTCCCAATAGCCTTCAAGCCAAACACACTTCTGGGGACCCTGGATGTGCACAAAGTGTTAATCAAGCAAAAGGTTGCCGAGGAGAAAGTCAGAAGACCTCCGCCGAAAGTGCCAGAGAAAACCGTGAGGTTGGTTGTGAATTACCACCGGACGCAGAAGGCTGTGGTCAGGGTGAATCCTCTGGTGCCGCTGCAGAAATTGGTTCCAGTCATTTGcgagaaatgtgaatttgatCCCAGGCATGTCACTTTGCTGAAGGACAATATTAGCAACAAGGAGCTGGATCCTTCCAAATCACTAAGTGACTTAGGAATTCGAGAGCTCTATGTGTTGGACCAAAGCCTTGagcCAGTCTGCTCTTCTTCTTTGAGTGCCAGTGCCTCTGAAAGGAAAGGCATCTTTGGTCTCTTCAAATTCAACAAGAGGAAATCTAAGACCGAAGAGCAAAAAGATATGGACATGGATCATACTGGTGATAAAAATGCTCACAATTCAGAAAACGACTACGCTGGTAGTTCAACAGCTCCCAGCACCCCCGCTGTGAACCTGCGGCCCAACACTCTCGGCCAGTCGCAGTCTGTGAGCAACATCTCCAGAACGTCTCCAAAAGCGGAGTTCAAGAAACGCCGGGCACCACCGCCTCCCCAGGCACTTCCCGGTGTGCAGATGGCTCAGCGAGGCTCAGAGGGAAACATCCAGgtCACACCTGGCTCACCGAACACCAACCagcagaagaagagaaaagccCCAGTACCCCCGGCAACTCCTGCAGCCTCCTGCAGTCTCCAAACAGATGAAGACTCCTCAGAAGtgagcagcaacagcagctccaCAGAGGAAGGGGAGCCGGCAGTCAGCAGCACCAGCACAGAGCAGCCCGAAGCGGCCTCCAATGACAAGATGGAGGAGGCACTGAACAGCACCATGGAGGAGACCGAATCGATGCTGAATTATAAAATGGAAGAAACGGAAAACAACAGACATAGCACCATGGGCAGCTATCTCAAGTGA

Function

GO: NA

KEGG:

id description
K18623 COBL; protein cordon-bleu

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002551 True 1284 mRNA 0.53 8 18723397 18759586

Neighbor

gene id symbol gene type direction distance location
AMCG00002548 NA coding downstream 10306 18701895 ~ 18713091 (-)
AMCG00002552 NA coding downstream 90567 18629649 ~ 18632830 (-)
AMCG00002547 grb10,LOC106605415,LOC106579904 coding downstream 121289 18586078 ~ 18602108 (-)
AMCG00002550 NA coding downstream 150415 18554798 ~ 18572982 (-)
AMCG00002549 NA coding downstream 178322 18528653 ~ 18545075 (-)
AMCG00002557 NA coding upstream 26534 18786120 ~ 18786641 (-)
AMCG00002556 NA coding upstream 27087 18786673 ~ 18786954 (-)
AMCG00002555 NA coding upstream 111777 18871363 ~ 18895560 (-)
AMCG00002554 trioa,LOC108426039,LOC107669652 coding upstream 140687 18900273 ~ 18978957 (-)
AMCG00002560 LOC107551198,LOC107746972,LOC101077175,LOC103367001 coding upstream 373609 19133195 ~ 19160336 (-)
G123961 NA non-coding downstream 137467 18584709 ~ 18585930 (-)
G123926 NA non-coding downstream 253790 18469234 ~ 18469607 (-)
G123876 NA non-coding downstream 517265 18205668 ~ 18206132 (-)
G123845 NA non-coding downstream 671065 18051097 ~ 18052332 (-)
G123824 ctnnb1 non-coding downstream 907931 17811518 ~ 17815466 (-)
G123981 NA non-coding upstream 22559 18782145 ~ 18782366 (-)
G124068 NA non-coding upstream 524292 19283878 ~ 19284293 (-)
G124175 NA non-coding upstream 1542486 20302072 ~ 20334454 (-)
G124222 NA non-coding upstream 1780721 20540307 ~ 20540523 (-)
G124327 NA non-coding upstream 2219511 20979097 ~ 21116735 (-)
AMCG00002533 ulk4,LOC107704090 other downstream 681824 17933464 ~ 18041573 (-)
G123829 NA other downstream 733932 17922452 ~ 17989465 (-)
AMCG00002524 NA other downstream 1017108 17690008 ~ 17706289 (-)
AMCG00002503 NA other downstream 1749096 16958162 ~ 16974301 (-)
G123585 NA other downstream 1883675 16836156 ~ 16839722 (-)
AMCG00002584 NA other upstream 2887469 21647055 ~ 21678545 (-)
AMCG00002596 NA other upstream 3141706 21901292 ~ 21902597 (-)
G124719 NA other upstream 4326408 23085994 ~ 23296115 (-)
AMCG00002629 sqle,LOC106579093,LOC102798444,LOC106605546 other upstream 4422335 23181921 ~ 23192656 (-)
G124829 NA other upstream 5501979 24261565 ~ 24261823 (-)

Expression


Co-expression Network