AMCG00002559 (LOC101472004,LOC102200234,LOC106926897,LOC103151564)


Basic Information

Item Value
gene id AMCG00002559
gene name LOC101472004,LOC102200234,LOC106926897,LOC103151564
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 19171519 ~ 19174613 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002559
GAACGCCTGCTCCTGTCTTTGCTTCCTGCTCACATTGCCAGGGTGATGAAGGCTGAAATTATCCAGAGATTAAAGGGGCCCAACTGTGGTCAGgtggaaaacacaaacaacttcCACAATTTGTATGTTCAACGGCACACCAATGTGAGtatTCTATATGCTGATATTGTGGGATTCACACGCCTTGCCAGTGACTGTTCACCAGGAGAACTGGTCCACATGCTCAATGAACTGTTTGGAAAATTTGACCAAATTGCTAAGGAGAATGAATGTATGAGAATTAAAATCCTTGGGGACTGCTATTACTGCGTATCTGGCTTACCAGAATCACTGCCAAACCATGCTAAAAACTGTGTAAAAATGGGACTGGATATGTGTGAAGCCATA

Function

NR:

description
adenylate cyclase type 2 isoform X5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002559 True 387 mRNA 0.43 3 19171519 19174613

Neighbor

gene id symbol gene type direction distance location
AMCG00002560 LOC107551198,LOC107746972,LOC101077175,LOC103367001 coding downstream 11183 19133195 ~ 19160336 (-)
AMCG00002554 trioa,LOC108426039,LOC107669652 coding downstream 192562 18900273 ~ 18978957 (-)
AMCG00002555 NA coding downstream 275959 18871363 ~ 18895560 (-)
AMCG00002556 NA coding downstream 384565 18786673 ~ 18786954 (-)
AMCG00002557 NA coding downstream 384878 18786120 ~ 18786641 (-)
AMCG00002558 LOC108272792,LOC108435531 coding upstream 74017 19248630 ~ 19258630 (-)
AMCG00002563 papd7,LOC107691498,LOC107694334 coding upstream 159298 19333911 ~ 19351773 (-)
AMCG00002567 NA coding upstream 187722 19362335 ~ 19366244 (-)
AMCG00002566 ube2ql1,LOC107711339,LOC107691500,LOC107754840 coding upstream 219729 19394342 ~ 19403623 (-)
AMCG00002568 NA coding upstream 307253 19481866 ~ 19493271 (-)
G123981 NA non-coding downstream 389153 18782145 ~ 18782366 (-)
G123961 NA non-coding downstream 585589 18584709 ~ 18585930 (-)
G123926 NA non-coding downstream 701912 18469234 ~ 18469607 (-)
G123876 NA non-coding downstream 965387 18205668 ~ 18206132 (-)
G123845 NA non-coding downstream 1119187 18051097 ~ 18052332 (-)
G124068 NA non-coding upstream 109265 19283878 ~ 19284293 (-)
G124175 NA non-coding upstream 1127459 20302072 ~ 20334454 (-)
G124222 NA non-coding upstream 1365694 20540307 ~ 20540523 (-)
G124327 NA non-coding upstream 1804484 20979097 ~ 21116735 (-)
G124402 NA non-coding upstream 2620160 21794773 ~ 21794988 (-)
AMCG00002533 ulk4,LOC107704090 other downstream 1129946 17933464 ~ 18041573 (-)
G123829 NA other downstream 1182054 17922452 ~ 17989465 (-)
AMCG00002524 NA other downstream 1465230 17690008 ~ 17706289 (-)
AMCG00002503 NA other downstream 2197218 16958162 ~ 16974301 (-)
G123585 NA other downstream 2331797 16836156 ~ 16839722 (-)
AMCG00002584 NA other upstream 2472442 21647055 ~ 21678545 (-)
AMCG00002596 NA other upstream 2726679 21901292 ~ 21902597 (-)
G124719 NA other upstream 3911381 23085994 ~ 23296115 (-)
AMCG00002629 sqle,LOC106579093,LOC102798444,LOC106605546 other upstream 4007308 23181921 ~ 23192656 (-)
G124829 NA other upstream 5086952 24261565 ~ 24261823 (-)

Expression


Co-expression Network