AMCG00002568


Basic Information

Item Value
gene id AMCG00002568
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 19481866 ~ 19493271 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002568
GGCTGCCGTTTGTTTTGATGGCGGTTTCCAATGGTGTTTTAATCCCTTTATTTGTGTAGTTTTGTAACCCCCTTGCTGTGTTACTATGATGCCCGGCGAGAGTCACTCTCAAACGGCAGGAATTGCCTCAGATGCAACGGCAGGAACTTGTCAGAACTGTAACGCTTTGCAGCAGaaCTTAAATGAATATGTAGCAGCACTTCTAGCACTGAAGCAAAAGATCATTGACACAGAtCACCTGCTAACGGAATACCAGGAAAAGTGTGATGAGCTTCAAAAGGCTCAAAGGGAGACCAGCACCCTCCACCATCAGCTGGATGAACTGCTCTTGAAGCTGGTACCGttggaaaaacagaacaagGAGTTTGAGGAAATGAAGTTAGAACTGGACGAAAAGAGGAGCTCCCTAAAGCTCTATCAGCAGTCCTTTCTGGAGGTTGAAACCCTAAAGGAAGATAGAAGTAAAACGGAAGCTTTaAAGAAGAAGCTTGAAAGTCAAGTGAAAAGGCTTGAAGatataacagaaaaacagagctgtgaaataaagcaactgaaattggagagaaaaacagtGGAGAAGGATCTACAGAAAACTCAGaaaaagctCGACAAGTTGGAAAAAGATAATCAGAGAAGGGAATTAAGAAATTCGTCAACTCAAACAAATGCAACTCAGGAAACGGCACCAATACTTGACAAAACTAAAGTGAGGTTGCTCTTAGAAGAACTGTGGATGTGTATTGAACCCTCCTCTCAGGTATCGCAAACGCACAGAGAGCAACTACAGTTTTCAgATGAGATGAGACATCCCAGGATGCCCAGTGAAAGCCCTTCATTTGCACCAACGGTTTTGCTCAACAGTCCTTTGAAACGGGAAGCGCACAACAACCAGCCACTTCTGTACAAGAGCCCATCCAGAAGGAGTGTTGAGCCATCACGTTTTCCCATCATTCCTTTCATATCTTCTGGAGCGCCTGAGCAGACGCTCACTGTGCCTGAAGCTGCAGTTACAAGGCACCGGAAAGCAAAACGCAAAGAAAAAAGGAGGAGGATGGAGCTATTTACTGGTGAGACTGCTTTGAATGGGGCAGAGCAGGAACTGACTGTACATGAAAACTTAAATGAACGCCTTGGGCCGCCCTCCGGTGATGAGAGAGAGCACAGTCCATTACCTGGCCATGATCTTGATCAGTTACTGGAGTGGTTCACGCCTTTACCTCCTCTTCTGTCTCCAGTGCACTTTTCACCACCTCACACTGAAGAATCTTTATTCGGAAATATGTCAGACTCGAGTGCTGAAGATGAAGTCGGACCTCTCAACAGTGCAGTGAAGGATATCTTGGTGTCTGAGTCACCTCATCTTAAGGACGTGAAAGATGCTCTTCAGAGTGACATCCCTTGTGATAAAGTGGAATCTGAACTCGAGGACTCTTCTGAACTGGCCTCCACCCAAACTGTAGACCGCTTTTTATGCAATGGGTCCGGCACCTCTTCCTCTGTACCCCAGAACCGCCATGAACCAGATCCTTCTATTTCTGTGGATATGGTACAAGATGGATTGACAACATCCACACATAAAACAGATACAAGTAATGCAGTTTCCCCTGAGAGCCTGCACAATCATGAAAATAGCGATGGCATAACATCTTCCCATATTGCTCAAGAGACGGAATGTGCAGTAAATCTTCCACCCAAAGAAGCGCCTCCACCACAAAGTGTCTTGGGATCAGAAGAGACCAGTAAAACATTAATCCCGACACGATCTGATGAAGAAATGTTGGATGTATCCAGAGACCCTCTGTCTGATGATCCTGTTCAAGAGCCCGTGGTTAACGAAGTGACGGAAGAACTGCCCACACCGATGGCCGAAGTCTCTGAGGTTGAGAGCTCAAACGCGGAACAGGAGGAGGTAGAACAAGTCAAAACGGATGGAAACGTAATGGATACAGAATGTTCTCCGTGTCAAGAGCATGTCTCTCCAGATGAAAACAAGGCTGAGGATGACACTGATGTTAAAAGTGATAGCTGTCAATTGGATActgctgaagaaaaaacaaaaccgacAGATCCACAGGTGGATATGGACTCGAACAGTGATAGCGCAGGGGGGTGCAATGCACTGCAAATGCTGTTCCAGACTCCTCCAgcaaatgttaatgtaattaaagaGGAGATGGAAGTCATGGACTCCCCTGTACAGAGCTGTATGGAACAGGAAACAAATGCAACTGAACAGGTTAGCATCCAAAATGTGCAAAGTGAAACACAGAATGTAATACCAGCTGAAGAAGTAATGTTAGAGGAAGTGTCTGAAGCTGGTTCAAAGGACATTGCGCATTTAGGAACTGCTGATTCAAACCACTCTGAAGAAAGCCAGAAAGAAGACCGTTCGGAAACCATCGTGGAGGAAAGCTCAGCTCAAGAACTTGAAGTTTGCACAGGTATTTCAGACTCTGCAGCAATGGATATCAAGGTCTCGCACAATGATTCAAGTTTACCCGAAGATGAAGACGAACTAGAACAagcaaaaggaaaggaaaatgttgATGTGATTGGAAGCTCTTCAGTCCCACAAACTCCTGAAGAATCAAAAGCAGCTTTTGAACAGAATATGATTTCTTTAATAGAATCATCTGACGgtgaacaaaatacaattgaagTGAAGGATTTAGGAGACACAGATTCGGAATCACATGGGATAGAAAGAGATTCAGATACAAAGCTTTCTgagctgaaagaaaaaacagaagagaaaccaGACGAAACGCCCAGTAATAATTCTAGTTCACTTGAAGTCAAAGCTCAGGTCTCAAGTGCAACAGACTCTATGTCCTTAGATAGTATTTCCTCCAGCGTAGAAAAAACAAGTTCCGTACAAAATGCTCATGAGCTGAAGTCTGATGGTAATGATTCGACTGCAGTGaatcaaaacagcagcagcGTAAAACCTTGTGACACCAAACCTGAGTCAGATTTGGTGGAAGAGAAATCCAGGGGTGAAAACCAACGTGAAGATATCCACTCAAAGGATTCTGTGAAGGATGATGATTCGTCGGATGAACAAGAGAGTTTTACAGTCCAGAGGAAAGTGAAACCAATCAATCAGCGAGTTGGAAGCATTAATAATGATCTTCAAAAGCTTGTGTCGGTTGGAAGGATGCAGTCAGAAGTTAATCAAGGGAAAACACCTGTGGAAGATAATGAGACtgaagtaaatgtaaaaacacctgGTACACCCTTGATTAATTCTGATGAGATGGAAATGCCAAATAAATTGAAGGAGGTGCATCCAGAAAAGGAATTCAAAGAATGCATAACCTCTAGTCTTGAAGATGTGCCTCATCAGTCAGAAAAGACAATTACAGAAATGGATAATCTGAGTTCTACTACTCTCAGAAGTCTTTCAGAACCAGGATTAGAAGCAGAGAGAGATTCCCAGCATCGGCACAGAGATGAAGCATCTAACGGAAAAGTTTTGTGTGAGGAACCTGAAGTGCTGTGTAATGATGAGGCTGTCACGACGCGCAAAAACCTGGCTCGGACAACTCCAGGAGCGTGCCGACGAGGTGCTGCAAAAACCAAGACTTTAAAAGACGACATTCTTCCCGGTACTATATTAGGTCGATTAAAAGCAGGTCTAAAAGGAAGAGAATCTGTCACAATGAATCCACCAGTGCTGGCTTGTGCGGATACCTCTACCTCAACAAAGTCTTCATCGGAATCCATAAAGAAGGTTCGGTCAGCCATGGGCCCACCTCTTCCTCCGCTGTTACCACCACTGACTGCCACACCTCCTAGGTTACAGAGACTTGCTTCACCTTTAAGGTTACGGTCTTGCAGGTTGTCCTTTCCCTCACCGATGGATGAGCTGGTATCTCCATCGGATGGGCCAAAGAAAAACTCTCCATGCTTTGCCACTCCATCCCCTTCAGACTCTAAAAGCGGAACAGTCTCTCCATTGCAGTTCTGTGCTGCCACCCCCAAGCACGCCCTCCCAGTTCCTGGTCGGCTCCCACCTTCTGCATTAACCTCATCCACTTCCTCTCCCACCATGCAGCAGGAGAACTCTGTGAGAATCTTGGACACCATGTATCCAGAACTTTCTGCCCGTGCAAGAACACTCAACATTCTTCGAGGGAATGTTCATCTTAATAGAAGCATTCCTGGTGCTGCAAACCATGTCCCAGGATCTGTCAATCAGATCTCCGGATTCAAAGCCATTAATTCTTCCACAACCGCCTTTACTAAAACAGGGAAAGCTTGTGAACTGGAAAACAGCAGCTTGAAGCAGCAGTCAGAAAGCACTCCAGTGATCAGAAAAAGGCCAGGAGTTAACATGCTTTTGCCGAGAAGCGCAAAAAAGCTTCGATTAGATATGGATTCACCTGTCCCTGAAAAGATGGAGGAGCCAGTTACATCTCCTGAGAATTCATCGGAACTTAGTGAAGGAAGAATGCAGAAACAAGGTTTGACACCAACGGAAAAGCACTTGCCCTCTAGAAATGTTGCAGGAAACTTTCCACCAAAAGTAATAGTAAACGCATTTAAGAAGATTGAAAAAGCCTGCTTTGACTTGCTACCTGTAATTAAAAGTCATCTCAAAGCTGGAAATGTTTCCCGGGTACCAGTGTTGAGAGACGAGGAGCGGGACGTCATTAAGAAATTTTGCTCAATAAACAAGTTCAAGCACTTGGCGGAAGAATTCCTAATTGCTATTCTTTCCAAGATGAAGTCTGAAAAGCTTGTCCTGCATAGTAACCACCTTCAAGCCCTGTGTAGGGTGTATGTCGGGATTTGTCGCCAGCAGGGAGATTTAGAAAAGGCTCGTCTTTTTgcttacagcattttaaaagaagaTTTTCCTGATTCTGCTAAAATGGTGTTATTTGTCATTAGCACATGGTACAACATCTTCTCCTTCCCcggattaataaataaagcaatccaGGCGGTGACCAGACACAGAGCAAAGGGAGACGTCCTGCAGTGTCTAACCACTTATCTAGACTGGGAGAAGGCCCCTCCAGGAGATATAGTGAGATTACTTTCCAATACGATGATTGTTCTGCAAATGGGAGTGAATATGACATTCCAGTATCACGACCGACACGGAGAGGACTTGAGCCCTGGGGTTTGGGAGTACATATTCGCTTTAGACCTGCTGTGTTCCCAGCAGCACTGGGATTGGACACACGACCATTTTATATGCAAGGAGCTTTGGCCAATCATGGACAAGTGGTTGAAACAAGGGAAGAGAGTGACACAGCACACCACTGATATTTCAGTAGCTGCTGTTCTCAGGCTTATAGGACGACTGGGCCAGCtggggatgagagagagatctgTCACTTCTGTGAAAAACGTTGCCAGTGTTATCAACAAGTTTGGCCAACATGCTAACGCAGAAGGTGTTCCCTGGGCCGTGCAGTTGGCAGCGGTGTACGCGATTTACGATTTGGCTCCGAGCAACCCCAAAGAAGCGCTGGAGGCCCTCGCAGCGTGGAGAGCGGAAACGTCCCACCCAGTGCCTCCCGCAGTCACCAGCTGCATCACACAAATCGGCTCAATGTGTCGGCAGATTAGATGAAGGGGGTAATTTAGAAGGCAAAGTGCTCTGAACAGCATCTTCTAACGGACGTGGGCTTTTTAATTGTGTAGCATTGTGCTGTCGTTCTGCCAGCTAATGCTGGAAAGTGCTGGAGGACAATTCAGTGCTTCCTTCTTGCCTCCAGTCTCGGTGCAAAAAATTTGTAGCAAGTAATATATGCTATAACGGTTTTATCAATCTGAACAGAAGATGCTTTTTACAAGATTGTTCTGTTAGCGGCcgcattattttgtttgttgttttttgtttcttgaaagCCATATTGTAAATAGGTGAACAATCTTTCCTTGCCCACTAATTCCTTTACTTTGAAAGGGCATTTATAAGTATTTGAAAAAGTATTGGtacataatgtaaatgtttttgtacatAATTTGTTGATACTCTAGAGaataatttttatattaaaatgaataacaatg

Function

GO:

id name namespace
GO:0003678 DNA helicase activity molecular_function
GO:0043138 3'-5' DNA helicase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002568 True 6030 mRNA 0.44 19 19481866 19493271

Neighbor

gene id symbol gene type direction distance location
AMCG00002566 ube2ql1,LOC107711339,LOC107691500,LOC107754840 coding downstream 78243 19394342 ~ 19403623 (-)
AMCG00002567 NA coding downstream 115622 19362335 ~ 19366244 (-)
AMCG00002563 papd7,LOC107691498,LOC107694334 coding downstream 130093 19333911 ~ 19351773 (-)
AMCG00002558 LOC108272792,LOC108435531 coding downstream 223236 19248630 ~ 19258630 (-)
AMCG00002559 LOC101472004,LOC102200234,LOC106926897,LOC103151564 coding downstream 307253 19171519 ~ 19174613 (-)
AMCG00002569 NA coding upstream 29581 19522852 ~ 19543805 (-)
AMCG00002570 LOC103388314,LOC102783449,LOC100707272,LOC101473954,LOC103366223 coding upstream 345113 19838384 ~ 19843617 (-)
AMCG00002579 NA coding upstream 776289 20269560 ~ 20274450 (-)
AMCG00002580 LOC108434887,LOC108272386,LOC108232307,LOC106521611 coding upstream 866286 20359557 ~ 20365199 (-)
AMCG00002578 NA coding upstream 1012323 20505594 ~ 20512929 (-)
G124068 NA non-coding downstream 197573 19283878 ~ 19284293 (-)
G123981 NA non-coding downstream 699500 18782145 ~ 18782366 (-)
G123961 NA non-coding downstream 895936 18584709 ~ 18585930 (-)
G123926 NA non-coding downstream 1012259 18469234 ~ 18469607 (-)
G123876 NA non-coding downstream 1275734 18205668 ~ 18206132 (-)
G124175 NA non-coding upstream 808801 20302072 ~ 20334454 (-)
G124222 NA non-coding upstream 1047036 20540307 ~ 20540523 (-)
G124327 NA non-coding upstream 1485826 20979097 ~ 21116735 (-)
G124402 NA non-coding upstream 2301502 21794773 ~ 21794988 (-)
G124429 NA non-coding upstream 2425429 21918700 ~ 21918915 (-)
AMCG00002533 ulk4,LOC107704090 other downstream 1440293 17933464 ~ 18041573 (-)
G123829 NA other downstream 1492401 17922452 ~ 17989465 (-)
AMCG00002524 NA other downstream 1775577 17690008 ~ 17706289 (-)
AMCG00002503 NA other downstream 2507565 16958162 ~ 16974301 (-)
G123585 NA other downstream 2642144 16836156 ~ 16839722 (-)
AMCG00002584 NA other upstream 2153784 21647055 ~ 21678545 (-)
AMCG00002596 NA other upstream 2408021 21901292 ~ 21902597 (-)
G124719 NA other upstream 3592723 23085994 ~ 23296115 (-)
AMCG00002629 sqle,LOC106579093,LOC102798444,LOC106605546 other upstream 3688650 23181921 ~ 23192656 (-)
G124829 NA other upstream 4768294 24261565 ~ 24261823 (-)

Expression


Co-expression Network