AMCG00002576


Basic Information

Item Value
gene id AMCG00002576
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 20457743 ~ 20463329 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002576
ATGAGCTCCGAGAAACACAATTTTTTGGTGCAGCCCGCGGTGAAGAATGTGCTGATGTTTCGCAATGGTGACCCGTATTATGAAGGGAGGCGTCTGGTGATCAACGAGAAAAGGATGACCAGTTTCGAGACTTTCCTGAAGGAAGTGACTGGTGGGGTTAAAGCCCCCTTTGGGGCGGTCAGGAACATCTACACCCCAAAAGGGGGCAACCGGGTGCTCTCGCTTGAGCACCTGCAGAGTGGGCAACATTATGTAGCGGCCGGCAGAGAGAGGTTTAAACAAATAGATGTGATTGCCAATGGAGACGTGCTGAATCCAGCAGTCAGGCTTTTAATACCGCGCCGAGTCCTGGGACAGTTCGAGCGTGTGCTTGAGATGATCACCGAGAAAATGGGCTTGCGGATCCTCGGGGGCGTGCACAGCCTGTACACTCTGGAAGGAGGACTCGTCAATGATGGAAAGTTACTAGAAAATGGACAATTTTACATTGCGGTTGGGCGTGAAAGGTTTAAAAAGCTTCCCTACAGTGAACTCATTTTTACAAAACCCATGACAATGAGGAGATTCATTGGGTAA

Function

GO: NA

KEGG:

id description
K23405 DCDC2; doublecortin domain-containing protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002576 True 576 mRNA 0.50 3 20457743 20463329

Neighbor

gene id symbol gene type direction distance location
AMCG00002575 slc6a3,LOC108272311,LOC107558633,LOC107564665 coding upstream 30945 20411836 ~ 20426798 (+)
AMCG00002574 NA coding upstream 61737 20370543 ~ 20396006 (+)
AMCG00002572 LOC106593690 coding upstream 218803 20229727 ~ 20238940 (+)
AMCG00002571 irx2,irx2a,LOC107558646,LOC107554509 coding upstream 423883 20030158 ~ 20033860 (+)
AMCG00002564 med10,LOC106588698,LOC107691542,LOC107595625,LOC107584362 coding upstream 1047344 19407058 ~ 19410399 (+)
AMCG00002577 NA coding downstream 224021 20687350 ~ 20868956 (+)
AMCG00002581 NA coding downstream 558607 21021936 ~ 21054156 (+)
AMCG00002582 NA coding downstream 591177 21054506 ~ 21070496 (+)
AMCG00002587 NA coding downstream 1211742 21675071 ~ 21693525 (+)
AMCG00002588 NA coding downstream 1236357 21699686 ~ 21742911 (+)
G124178 NA non-coding upstream 98048 20359323 ~ 20359695 (+)
G124165 NA non-coding upstream 216864 20240585 ~ 20240879 (+)
G124150 NA non-coding upstream 295990 20161547 ~ 20161753 (+)
G124094 NA non-coding upstream 1063019 19391123 ~ 19394724 (+)
G124070 NA non-coding upstream 1073509 19333799 ~ 19384234 (+)
G124232 NA non-coding downstream 98293 20561622 ~ 20562263 (+)
G124331 NA non-coding downstream 661686 21125015 ~ 21170354 (+)
G124364 NA non-coding downstream 1190453 21653782 ~ 21654725 (+)
G124403 NA non-coding downstream 1331665 21794994 ~ 21795202 (+)
G124405 NA non-coding downstream 1331986 21795315 ~ 21795957 (+)
AMCG00002573 NA other upstream 124713 20241848 ~ 20333030 (+)
AMCG00002561 NA other upstream 1324176 19130067 ~ 19133567 (+)
AMCG00002562 LOC106579813 other upstream 1329796 19073693 ~ 19127947 (+)
G123989 NA other upstream 1619212 18832014 ~ 18838531 (+)
G123807 NA other upstream 2473013 17915436 ~ 17984730 (+)
AMCG00002622 NA other downstream 2524216 22987545 ~ 22990164 (+)
AMCG00002623 sqle,LOC106579093,LOC106605546,LOC107686341 other downstream 2604795 23068124 ~ 23180043 (+)
G124689 NA other downstream 2689319 23152648 ~ 23290535 (+)
G124769 NA other downstream 3214606 23677935 ~ 23681385 (+)
G124863 NA other downstream 3958923 24422252 ~ 24422613 (+)

Expression


Co-expression Network