AMCG00002581


Basic Information

Item Value
gene id AMCG00002581
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 21021936 ~ 21054156 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002581
ATGCACGGCTGGTTCGATGGAGGAAAAAGGCAGAACGCCAAAATACGAAAAGGCGTATCCAGGCCCCATCTCTGCGCGCAGCGGTCTGTAAGAGAGATCCTGCTGGAGCTGGTGACATTCCATCTGCTGACTGACAGAGTTGGACAGTATGAGGCGTTGTCTGCCATCACAGGCAAGTGCTTAGCTATGATTTGTGACGAGGCATCAGACAGGGCTGGAAGACACCTTACTGCAGTTTTGTTTCAGATACCGGATGCTACAGAGGTAGAAGAGACTCATCTGGCTGCAGTCATCTTTCCTGAATCTGCCAATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002581 True 315 mRNA 0.50 5 21021936 21054156

Neighbor

gene id symbol gene type direction distance location
AMCG00002577 NA coding upstream 152980 20687350 ~ 20868956 (+)
AMCG00002576 NA coding upstream 558607 20457743 ~ 20463329 (+)
AMCG00002575 slc6a3,LOC108272311,LOC107558633,LOC107564665 coding upstream 595138 20411836 ~ 20426798 (+)
AMCG00002574 NA coding upstream 625930 20370543 ~ 20396006 (+)
AMCG00002572 LOC106593690 coding upstream 782996 20229727 ~ 20238940 (+)
AMCG00002582 NA coding downstream 350 21054506 ~ 21070496 (+)
AMCG00002587 NA coding downstream 620915 21675071 ~ 21693525 (+)
AMCG00002588 NA coding downstream 645530 21699686 ~ 21742911 (+)
AMCG00002590 ndufb9 coding downstream 758422 21812578 ~ 21815488 (+)
AMCG00002598 NA coding downstream 1096640 22150796 ~ 22156021 (+)
G124232 NA non-coding upstream 459673 20561622 ~ 20562263 (+)
G124178 NA non-coding upstream 662241 20359323 ~ 20359695 (+)
G124165 NA non-coding upstream 781057 20240585 ~ 20240879 (+)
G124150 NA non-coding upstream 860183 20161547 ~ 20161753 (+)
G124094 NA non-coding upstream 1627212 19391123 ~ 19394724 (+)
G124331 NA non-coding downstream 70859 21125015 ~ 21170354 (+)
G124364 NA non-coding downstream 599626 21653782 ~ 21654725 (+)
G124403 NA non-coding downstream 740838 21794994 ~ 21795202 (+)
G124405 NA non-coding downstream 741159 21795315 ~ 21795957 (+)
G124408 tatdn1 non-coding downstream 751464 21805620 ~ 21810821 (+)
AMCG00002573 NA other upstream 688906 20241848 ~ 20333030 (+)
AMCG00002561 NA other upstream 1888369 19130067 ~ 19133567 (+)
AMCG00002562 LOC106579813 other upstream 1893989 19073693 ~ 19127947 (+)
G123989 NA other upstream 2183405 18832014 ~ 18838531 (+)
G123807 NA other upstream 3037206 17915436 ~ 17984730 (+)
AMCG00002622 NA other downstream 1933389 22987545 ~ 22990164 (+)
AMCG00002623 sqle,LOC106579093,LOC106605546,LOC107686341 other downstream 2013968 23068124 ~ 23180043 (+)
G124689 NA other downstream 2098492 23152648 ~ 23290535 (+)
G124769 NA other downstream 2623779 23677935 ~ 23681385 (+)
G124863 NA other downstream 3368096 24422252 ~ 24422613 (+)

Expression


Co-expression Network