Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00002586 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 21355932 ~ 21360543 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0009451 | RNA modification | biological_process |
| GO:0016740 | transferase activity | molecular_function |
| GO:0051539 | 4 iron, 4 sulfur cluster binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00002586 | True | 267 | mRNA | 0.50 | 3 | 21355932 | 21360543 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002583 | LOC107711341,LOC107691508 | coding | downstream | 227679 | 21127114 ~ 21128253 (-) |
| AMCG00002578 | NA | coding | downstream | 843003 | 20505594 ~ 20512929 (-) |
| AMCG00002580 | LOC108434887,LOC108272386,LOC108232307,LOC106521611 | coding | downstream | 990733 | 20359557 ~ 20365199 (-) |
| AMCG00002579 | NA | coding | downstream | 1081482 | 20269560 ~ 20274450 (-) |
| AMCG00002570 | LOC103388314,LOC102783449,LOC100707272,LOC101473954,LOC103366223 | coding | downstream | 1512315 | 19838384 ~ 19843617 (-) |
| AMCG00002585 | NA | coding | upstream | 283817 | 21644360 ~ 21645046 (-) |
| AMCG00002589 | tmem65,LOC108429253,LOC103374125 | coding | upstream | 398290 | 21758833 ~ 21778461 (-) |
| AMCG00002591 | rnf139,LOC106569923 | coding | upstream | 434811 | 21795354 ~ 21802954 (-) |
| AMCG00002593 | tatdn1,LOC102775897 | coding | upstream | 444801 | 21805344 ~ 21812132 (-) |
| AMCG00002592 | NA | coding | upstream | 454922 | 21815465 ~ 21837472 (-) |
| G124327 | NA | non-coding | downstream | 239197 | 20979097 ~ 21116735 (-) |
| G124222 | NA | non-coding | downstream | 815409 | 20540307 ~ 20540523 (-) |
| G124175 | NA | non-coding | downstream | 1021478 | 20302072 ~ 20334454 (-) |
| G124068 | NA | non-coding | downstream | 2071639 | 19283878 ~ 19284293 (-) |
| G123981 | NA | non-coding | downstream | 2573566 | 18782145 ~ 18782366 (-) |
| G124402 | NA | non-coding | upstream | 434230 | 21794773 ~ 21794988 (-) |
| G124429 | NA | non-coding | upstream | 558157 | 21918700 ~ 21918915 (-) |
| G124431 | NA | non-coding | upstream | 565064 | 21925607 ~ 21925856 (-) |
| G124434 | NA | non-coding | upstream | 580634 | 21941177 ~ 21953671 (-) |
| G124535 | NA | non-coding | upstream | 1076343 | 22436886 ~ 22438729 (-) |
| AMCG00002533 | ulk4,LOC107704090 | other | downstream | 3314359 | 17933464 ~ 18041573 (-) |
| G123829 | NA | other | downstream | 3366467 | 17922452 ~ 17989465 (-) |
| AMCG00002524 | NA | other | downstream | 3649643 | 17690008 ~ 17706289 (-) |
| AMCG00002503 | NA | other | downstream | 4381631 | 16958162 ~ 16974301 (-) |
| G123585 | NA | other | downstream | 4516210 | 16836156 ~ 16839722 (-) |
| AMCG00002584 | NA | other | upstream | 286512 | 21647055 ~ 21678545 (-) |
| AMCG00002596 | NA | other | upstream | 540749 | 21901292 ~ 21902597 (-) |
| G124719 | NA | other | upstream | 1725451 | 23085994 ~ 23296115 (-) |
| AMCG00002629 | sqle,LOC106579093,LOC102798444,LOC106605546 | other | upstream | 1821378 | 23181921 ~ 23192656 (-) |
| G124829 | NA | other | upstream | 2901022 | 24261565 ~ 24261823 (-) |
