AMCG00002602


Basic Information

Item Value
gene id AMCG00002602
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 22302321 ~ 22323050 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002602
AACTTTCAGAGATTCAAAGGTCACCGCCATCTACGTTTTGTAGACTCAGCTTCTAAGAGAAGAGAAGTGACTGAAAATCATGGGGATTGTACAGGGTTTAAGTAAGAGGAAAATTATTGTTATCAGTGTTTTGGCAGTGTCCATTGTGACGATCATAATTGGACTCGGGCTTGGTCTAGGACTCCAACTACAAGAATGCCGAAATAAAGTTGAAGTCCCCACTTCTTGCAAGAACCGCTGCTATGTGCCCTATGAGGAAGGATCCACGGCCTGCCGCTGTGATAACACCTGTGCTACCAGCAACAACTGCTGCCCTGACTTCGAGGACATCTGCCTGCAGCCTACTCAACAATGGGAATGCAATAAAGCCCGCTGTGGTGAGACGAGGCACCAGAAGAGTAATTGTCACTGTTCAGATGACTGCCTGAATTTGGGGGATTGCTGCACAAATTTTAAACATGTCTGTCAAGGTCCTATCACACGCCTCATGTTTTTCACTGGTAGTATCATCTGTGcttggtttctttctttctcttatcGGCAATTCAGCTTCAAAAGGCAACCCGTGCTCCTGGTTTCGCTGGATGGACTTCGAGCAGAATATCTGCAGACTTGGAGTAAACTCATTCCAGTTATAGAGAAGCTAAgaAACTGTGGGACTCACGCTCCTTACATGCAGGCAGTATTTCCGAGCAAGACATTCCCCAATCATTACAGCATCGTCACTGGCATGTATTCAGAGTCTCATGGTCTTGTGGACAACAACATGTATGACCCTGTCTTTAAAGCATCATTTGCCCTTGGTAATGAAGAGTCATTCAAACCCAGATGGTTCCTTGGCCAGCCTATATGGCATACTGCAATGTACCACGGCCTGAAATCAGGGACATATTTCTGGCCTGGGTCTGATGTCAAAATCAATGGAAGTTTCCCAAATTTGTATGAAAAATTCAATGGCTCAGTGCCGTTTGAGAAAAGAGTCTTCACAGTTCTGAAGTGGCTCAGCTTACCTGAAAAAGACAGGCCAGATTTCTATACCTTATACCTGGAAGAGCCAGACAGCTCAGGACACAGCTTCGGCCCTGTCAGTGGTGGGGTAATTGAAGCTCTCCAAGGAGTTGACAAGATCATGGGCCAATTAATGAATGGTCTTAAACAGCTCAATCTTCACCAATGTGTCAATATTATAATAGCTGCTGATCATGGAATGGATGAGACCAGCTGTCAGAGAATGGAGTTCCTCCAAAattttgttgaaaatgaaaaccatctCTATATATATCAGGGAGCATTTGGAAGAATTCGAGCAAAAGATGACCAGCAAAGCCTTGACTCGGCTGGACTTGTGGCGAACTTGACATGCAAAAAAGAAGGACAAAATATTAAGCCATTCCTCAAGGCTCACCTTCCCAAGAGGATGCACTATGCGAACAGCATACGCATCGAAGATGTGACTGTGCTGGTGGATGCACAATGGCTGTTTGCAAGGAACAAAGACAGTTATACTCGCTGTAATGGTGGGACCCATGGCTATGACAATGACTACTATAGTATGCAAGCTATGTTTCTAGGATATGGACCCAAGTTTCTGTATAAATCTCAGGTGGAACCATTTTCCAACATAGAACTTTATAATCTCATGTGTGatttgctgGAAATCCCTCCTGCTCCTAATAATGGTACCCATGGGAGCATGAATCACCTTCTGAGAAAGCCAGCATATAACCCTGCTTACCCCCAAGAGGTGACCAAAAGTGGAGTGTGCCCTGTGGAGACTTTAACACCTGAAGACACGCTGAACTGCACTTGCCTTGCCATGGGCACAGCTAATTATAATGACAGACTGAATCTGACAGCGGCTGAAGTGGCCGCCTGTGAGGCCACACACATGCCCTTCGGGAGGCCCAGAATGATGCGATCTGAAGAGGACTACTGCCTGCTACATCAGCATGGCTACGTCAATGCCTACAGCAAGAAATCCCTGATGCCTGTCTGGACTTCCTACACCCTGGATAAACCTGGTAATTTGGCATCCTTGCCCAATATCATTCCAGACTGTAAAAGGGCTGATGTCCGGATCCCAGGTGCCCAGAGCCCGAGATGTAACTTCTACAGTCCTGATGCTAATGTTTCATCTGCGTTTCTTTACCCTCCCAatctCAACATCTCAACGGTCGACGGACAGTATGATGGTCTGCTGATGAGCAATGTGGTTCCTATGTATCCACAGTTTAAGAGAATCTGGGATTATTTCCACAATGTTCTGTTGAAGAAATACGCCTTCCAGTACAATGGGATAAACGTGGTGTCTGGGCCTGTTTTCGATTACAACTATGATGGACGATTTGATACCCCTGCTGAGATTAAACAAGCGGACAACAGTGAGGTTTGCAATAGTCAGGAGGATGCGTCCAAATGGGTGGAAGATCTCCTGTGGTTTCATCAATGTAAGGTGACCGATGTGGAGTGGATCGCTGGACTAGACTTCTATCAGGACAGTGGGAAGCCAATTCCAGAGATCCTGCGAATCAAATCACGGCCAACCGCCTCCATCCACAGGGTGAATTAAATGTCCTTCATTGGCAAAGAAGATGTTGACCttcaaagtaaaaaacaacaacaaaaaactttggtaacattttttaattcctcTGGCCCCCATTTGCAATTTaggattttatgtttttctccaGATGAAACCCATTTTGAAACATTGAACAATGGGGTGTAAAATTAGAATGAAAGAAACTCCATCAAGTATGAAACCGTTTAAGATCAAAAGGCTGGAAATATTGTTAGACATCAAAGGAAGAATGTCCTTGTTTTGTATCTGTTCTGAAATCCAGCCTGGGCCACATTATTGAAACTATATTTATGGTGTAAAGGTATCTTCACAAGACTGGCATTGACTGAATAAGCATACTTAATTATgatcattttcttaattttcaaataaatatggatttaatATGGAGTGCACAGCACTTGAAAAAGACCTTGGTGAGCAGTACATTTTGATACACCTGGAAGAGAAATTACACTCAGAACAGAATAATATTAATCTACCTGGTTCTTTGTTCACACCCAGCACACATTCCTACATGGTTATTCTGCTCTAAGAAGAAACAGGTCCAGAAGCTTTCAACTTATTTTTCCAGGAAAAAAGACTGTATAATGGACTGTATGAGTCTGCCAAGTTGACTcagtttcaattaaatgtattttttttctctctgcagtGGATGCAAACTAAATCTAAGATACTCTCAATTTTAAGAAATTAGAAGCCTTTTAATAAATGATCgttcatttaaatatgatttttttttttttattaagtgaCTTTTTTGTAACCGAAAATACCCCATCCTCAACTTGACCCAGTCAGGTTTGCCCCTTACTTAACTATCTTAGAATTTGTATGGTGTAGAAACCATGGAGACTGATATTTGGTATGTTTAAGGAGGCACTGCAACAGAAATGGTTGCTTCTAGTGTCAACAAGCTGCTTTCAATAGCGGTGTAAAAAGGCTGAATGAAAATATGCTGTCATCCATATTTCGGAGGGGgaagcattgtttttttaagaaggcAGGAGGGAGATGGACAGAAACAAAGCTTCAATGGCTTTGGTAATGATATGGAGAACTACTAAATGGACttggttttgaaatgcatacCTTATTTAGGATATATTTGTcaggaatgtttttttctttgtatttgcaGGCCTCTGAATTTCAGATTATTTATCTACGCAAAGGTTTTGCCATGATTTTACACAATAAATCTATCCAAGACATAAAGTATGCCCTATATGTAGTTCTAAAAATAGTACACTTTTTGTGGTGATCtgtcttttttgctttttttacttttcaaaaatGATGTACACAGATTCCTCATCTGCAATGCACCTTCTCTCACAAGTGTATTTCCCATGtcttaatgttttcttttttttttgggggggggggaactaaAATGCTACAGGAACAAATGTGTAATGAATTgctgatcataataataaagtcatcaatagttttttctaaataaaaaaatacacatttaatgcaATAACTTGTAACAGCACAAGAAAACTCACCTTGCAGTAAAGGTTGAGTGTCcctttgaaaacaacaacaaaaatgcatatatatacacacacacacacacacacactctctattTACATTCACCTTCCACACAAAGAAAATCCAAAACAAAGACTGGACACAAATTTCACACCATGACAAAATATACAGCAAGTATTTACAGTCATTCAGTCTGAGATATTTGCAGGTTTGGCAACGCAGTCAATAATATCCAGTAAAGCCAGGCCAATTTATCTCTTTAACATAGAAACAATCATCGGCATACATTGTCCTGTTATATAGAGAGACATGTCTGGTTGCTATATTGCAGTGGTGTACAATTCTGGCCCTTGCAGTTCCTGTATattgcaatgcaatgcagtCGATGTATATATTGGAGTGCTTTTCGCTTACTTCCGAGCCCTGGCTATTTAATCTGCACAATGGTCTGGGGAGCTGGCTGTCTCTTTACCTACGCATTGCCTGTACAATAAAGTTAAGGATTGTGTTATAACATACCAGCTTTCAGTTGTAATGTCGTATACTGTGTCTCATTATATGACCATCAGAATTAAAAACGTCTCTGTTAGGTCAAACTTTGGCAAAGGTGTGCAGAAATGCAACCGAAATAGGCGCTTAGATGTTGAAAGCTGGGCTCCCTCTGTGTTTAAAGACCAATTTAGAGAGATTGTCACCTTCACTGAACAGTGATAGAATAATAAATCTAGACTCCTTTACATAAATGCCCATGACATCCCTCCCCACACACAGGTAACAGCACTTGCACTATTTTAAGGAAACTGTAAACCACAGTTACATCCAGCTGAAGGTTTGCTGAATGtctctttatattttcagtCCGCTGAACATAGGGTCTGACGTGTGGTAGACTGCATTGTCTCGGGGGCAGTGGCTGTGGCAGGCACAGGTGTTGATGAACATCATGGGCTTCTTAATGACTTTGCCCTGTGGACACCGAAACTCCACCTGCACGGTCTTGGTGCTGTGTGGCGTGCAGCACCGTCCGTCCCGGCACACGCCACAGAATCTGGGTCTGTAGGCCTGGATGCTGGTGCAGTTTTTGAATGTGAAGTGAGTTGGAATCACAGTCTTGGTGGTTCTCATGCACTTCTTTCCTTTCTAGCTCGGGTTCCTGTGCTGCTGACCGCAGGGCCTGACAATACACAGGCGGTTCTGCTTCACCATCTCGCAGTGTCGGTTGCAATTGGTCACGCGGGTTGACACCCCCAGCCCACAGGACCGCGAGCAGGCCCCCCACTCTGTGGTCTGCTCAATGCAGTTGACACTGGGATCCAAGAGGTTGGCTCCAACTCCAACTGTCTCCTCTTCCCTGTAAGCGGCCATCGCGAAGCCTCCAAGGGGGGTTTCTGCCCTGGGGTTGCACACCCACTTCTCGCAGCACTCGCCCGGGACCTGCACTTTCCTGGGGAAGGGGCAGTCGGGGCCGGGGAGCAAGACGTCCAGGTTACAGCGGGGCACGCAGCCTATTTGCCCGTCTCTGCAGGCACACTGGTATTTACAGCTGGGGAAGAATATTTCACCGTTCTGATAGACAGAGCCATCAAACACACAGATATCCCCTTCCCGGGCTGccaa

Function

GO: NA

KEGG:

id description
K01513 ENPP1_3, CD203; ectonucleotide pyrophosphatase/phosphodiesterase family member 1/3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002602 True 5710 mRNA 0.43 26 22302321 22323050

Neighbor

gene id symbol gene type direction distance location
AMCG00002597 NA coding downstream 84313 22178932 ~ 22218008 (-)
AMCG00002594 NA coding downstream 192462 22041380 ~ 22109859 (-)
AMCG00002595 scgn,LOC106606120 coding downstream 262965 22020576 ~ 22039356 (-)
AMCG00002592 NA coding downstream 464849 21815465 ~ 21837472 (-)
AMCG00002593 tatdn1,LOC102775897 coding downstream 490189 21805344 ~ 21812132 (-)
AMCG00002603 NA coding upstream 136 22323186 ~ 22348504 (-)
AMCG00002605 taf2 coding upstream 31068 22354118 ~ 22380792 (-)
AMCG00002606 LOC106595460 coding upstream 58494 22381544 ~ 22389385 (-)
AMCG00002608 LOC106606163,LOC106595977 coding upstream 238067 22561117 ~ 22568988 (-)
AMCG00002610 NA coding upstream 275574 22598624 ~ 22620244 (-)
G124434 NA non-coding downstream 348650 21941177 ~ 21953671 (-)
G124431 NA non-coding downstream 376465 21925607 ~ 21925856 (-)
G124429 NA non-coding downstream 383406 21918700 ~ 21918915 (-)
G124402 NA non-coding downstream 507333 21794773 ~ 21794988 (-)
G124327 NA non-coding downstream 1185586 20979097 ~ 21116735 (-)
G124535 NA non-coding upstream 113836 22436886 ~ 22438729 (-)
G124582 NA non-coding upstream 274949 22597999 ~ 22598555 (-)
G124591 NA non-coding upstream 330432 22653482 ~ 22653719 (-)
G124669 NA non-coding upstream 673769 22996819 ~ 22999108 (-)
G124765 NA non-coding upstream 1332934 23655984 ~ 23663572 (-)
AMCG00002596 NA other downstream 399724 21901292 ~ 21902597 (-)
AMCG00002584 NA other downstream 623776 21647055 ~ 21678545 (-)
AMCG00002533 ulk4,LOC107704090 other downstream 4260748 17933464 ~ 18041573 (-)
G123829 NA other downstream 4312856 17922452 ~ 17989465 (-)
AMCG00002524 NA other downstream 4596032 17690008 ~ 17706289 (-)
G124719 NA other upstream 762944 23085994 ~ 23296115 (-)
AMCG00002629 sqle,LOC106579093,LOC102798444,LOC106605546 other upstream 858871 23181921 ~ 23192656 (-)
G124829 NA other upstream 1938515 24261565 ~ 24261823 (-)
G124848 NA other upstream 1968737 24291787 ~ 24339566 (-)
AMCG00002682 NA other upstream 3944002 26267052 ~ 26279621 (-)

Expression


Co-expression Network