AMCG00002603


Basic Information

Item Value
gene id AMCG00002603
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 22323186 ~ 22348504 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002603
gtttttcttccaccACATCGACTAGGACTTGCAAGGCCAGGTCATGTGCGTTGGAGTAAAAGCCGGAGCTGTAGGCTGATTCTGTTTAAAGGACATCTGCCAATGGAGCCATTGTCCCCAAGGACAGCTGTCACCATTACTTCATCTGCATTGGTTCAGGCTAAAAAAGCAAACGGAATAATGCAAACAAGCTGGGAAGCCCCCACACTTAACACAGGGCACTGGCACAGAGAGCCCTTACTGCGGGGTCAGAGCCGGAGCGCACAGCACCTTCCCACCATGGTCCTGCTGGGAAAACTGcgcagcgcagcgcagctcAGCGCACTTCATTccccgcagcagcagcagcagcagcagcagcggcgcGCCGGGCGGGCTGTCAGCATGGGCGAGCACAGGGCGCTTTCCGTTAGACAGgtaTTCTGCGCTTTCTTCATTTTCGGTGCAAATGTTACTTTGGGATACATTTACAATCGCCACAGACGCTCCGGAGAATGGGACGAAGCCCCATCAGATCCCGAACATGTTCTTGCAGATTACCCATGGGTAAGCACTTCAGGATCATGCAAAGGCAGATGCTTTGAACTACATGAAGCCGAACCTCCTGGCTGCCGCTGTGACAACTTATGCAAAACTTACAACAGCTGCTGCTCAGATTTTGATGAGCATTGCTTAAAAACAGcTCTAGGCTTTGAATGCTCTAAGGACCGTTGTGGAGAGGCCCGAAATGAGGATCACGCCTGTCATTGTTCTGAGGACTGCATGAGCAAAGGAGACTGTTGTACCAACTACAGGGCGCTATGTAAAGGGGACTCTTCCTGGTTGGAGGAGGAATGTGAGGAGATTAAAAGTGCCGAATGCCCGGCTGGGTTTGTTCTTCCTCCTCTGATAATGGTCTCAATTGATGGCTTCCGTGCCTCTTACATGAAGAAAGGCAATACTGTCATCCCCAACATTGACAAACTGAGAACATGTGGTACTCACTCGCCTTATATGAGACCAGTCTACCCCACAAAAACCTTTCCCAACTTATACACACTGGCCACTGGCCTCTATCCAGAGTCACATGGGATTGTTGGTAATTCCATGCACGATCCTGTGTTTGATGCCAACTTTAACCTTCGAGGTCGAGAGAAACTGAATCATCGTTGGTGGGGAGGTCAACCAATATGGATCACATCGGTAAAACAAGGAGTGAAGGCTGGCACTTTTTTCTGGCCGGTgGTTATTCCTCTTGAACGGAGAGTGATGACAATACTTCAGTGGCTTAATCTGCCAGACAGTGAAAGGCCGTACGTCTATGCCTTCCACTCAGAGCAGCCAGATAGTTTTGGCCACAGACTGGGACCTTTAAGCAATGAGTTAAACAACCCACTGAAAGATATTGACAAAATCATCGGGCAGCTGATGGACGGCCTGAAACAGATGAAGCTGCATCGCTGTGTGAATGTCATCCTAGTGGGAGACCACGATGACCCCAAAGCAGTTGTAGCAAATCTAACCtgcaaAAAGACTGAACAGCACTTTAAGCCTTACTTGAAACAGAACCTCCCTAAGCGTTTGCACTACGCCAACAACAGGAGAATTGAAGACGTACATTTACTTGTGGAAAGGAAGTGGCATGTTGCAAGGAAATCTACAGATGGCAAAAAGCACCCTGGGAAATGCTCTTTCTATGGAGACCATGGCTACGACAATAAAATCAACAGCATGCAGACCATCTTTTTGGGGTATGGTCCTTCCTTTAAATACAAGACAAAGGTCCCAGCATTTGAAAACATCGAGCTCTATAATGTCATGTGTGACCTTTTGGGTCTGAAGCCTGCTCCTAACAACGGGACCCACGGAAGTCTGAACCACCTATTGAAAAACCCCTCGTTCAAGCCAACCATGCCTGATGAAGTGGCTAAGCCACACCCTGTATCTGCCTCTACTGTAACTGATGACCTGGGGTGCTCATGTGAGGAGAAGAAGGGGGATGAATCGAGCTCACGCCTGACAAGCAAAGGATCGGatgTGCTCTATGCTGTCAATGGTTTAAACCTGGCGCACAGCCTTAGTGCAGAAAGCAAGCATCTACCATATGGCCGACCTGCTGTACTTTACCGTACAAAACACAGCCTTCTATACCACAACGACTATGTCAGTGGTTACAGTGAGATCTTGTCAATGCCTTTGTGGACATCATACACTGTCCCCAAACAGGCAGACACTTCGCCTCTGCCGGACTCGCTGAGTAACTGTGTGAGGCCTGACCTCCGCATCGCCCCCGCCCACAGCCAGTCCTGCACTGCGTACAAGGGGGACAAACAGATATCCTACGGGTTCCTCTATCCACCACAACTGGCATCAGCTGAGGCAAGATATGATGCCCTACTCATCACAAACACTGTTCCGATGTACCCAGCCTTTAAAAGGGTGTGGCACTACTTCCAGAGGACCCTGGTGAAGCGTTACGCAAGCGAGAGGAACGGGGTTAATGTGGTGAGCGGCCCCATCTTCGACTTTGACTACGATGGACTACGCGACTCGGCAGAAAAAATGAAGCAGTTTGTGAGTGGATCGGTGCCGATTCCTACTCACTACTACAGTATCATCACCAGCTGTCTGGACTACACACAGACCGCGGACAAGTGCGACGGCCCACTCAGCGTTTTCTCCTTCATCTTCCCTCACAGATCTGAGAATGACGAGAGCTGTAATagcTCTGAGGAGGAATCCAAGTGGGTGGAAGACCTCATGAAAATGCATACAGCTCGGGTCAGGGATATCGAAGCTCTGACAGGCCTGGACTTCTATCGCAAGACCAGCAGAAGTTACACTGAAATCCTTTCGTTAAAGACTTACTTGCATACATATGAGAGCGAGATCTAGAGAGCTAACGCAGTGTGGTACATCTTAGATGCACAggtgtatatttttatactgtttCGTATTTATTAttcctgaaatgttttaatggcCATTAGTATTCTAATCATATCTAACAAATGggccttttttaaaataacaagcaTGGAGGGACCTTTTGATTTTGTgtaattcttttattttttttaatttgtttaatgtcgTTTTAAATAAGTTTTTAGTGTGTCTGAAAAACGTCTGAATTCGGGGGATTTGTTTTAGGTGGAAAGCTTTGAGGGGGTGCTACAAGAGTGCGAGTTTATggtgctgtactgtacactaCAGTGAATATTGcgtgtatacatgtattattaaactGTGTGATTGACTTATTTATGCCTTATAGACCAATGAAATCACAACATAATAAACAAAGTTTTTTTCCAAATTGAGTGCCGATGTCTTTGGCTTGTATGTTATCATTATTGGTGTCATGGTAATGACGAAATGATCTGTAATAAAtcgaaatgtattattttatgacattttttcGTTAGTATGTGCATATTAGTATGTGCTAAGTTTTGCATTTGCATCACATAGTAATTTGCAGTGCTAATAATTTGCAATTATTAGTAGCTAATTTGAGCAATTGTGTACGTTTTATATGCTGTGTGGCAATGattaatgttattgtaatcTGGAGTGTAGTTCCACTGCAATCACATTAGATCAGATGTTCAAGGCACTGGATTTAGAGCTCATGTTGAATCAGCTGTAGGCTATAACTTTATGCAATCACATATTGATTGCCTTGGTTAGTTTGGTTAGTTTGACCTGGTTTTATGAGAATATAAGTATTTGTTCTTGATTTGTAACCTATATAATACAGAAAGACTtgaagtttgttgtttttctaatatCTCAACACATACTTCCAATGTTATATTGTTAATGTGGCATATCTACAGACACTGATCCATCCTACTGTAACTACATGCAAAGTTATGGTTATGAAGTTCCACTGTTTTCAATCACTTGTGTTCCTATAAAGAAAGGTTGCTCTTATTATACCTAAGAAGCAAAACTGCAGTTTGGAGGATTCTAAGAAGACTTGGAAAAGCAATCTATCTTTTGACCCCTTTGCTTAGAATACAAAATCcctatgtttttcttattaataaACTGTTCTGCTTGCTTACCAGCGTTCCACCTCAAAATATGATTGCAAAGCATGTTTGCCATATTTGCATCCATATCCTAAGTAATAAATGAGTCTGTTGATCATTAACCTCCAGGA

Function

GO: NA

KEGG:

id description
K01122 ENPP2; ectonucleotide pyrophosphatase/phosphodiesterase family member 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002603 True 4150 mRNA 0.45 26 22323186 22348504

Neighbor

gene id symbol gene type direction distance location
AMCG00002602 NA coding downstream 136 22302321 ~ 22323050 (-)
AMCG00002597 NA coding downstream 105178 22178932 ~ 22218008 (-)
AMCG00002594 NA coding downstream 213327 22041380 ~ 22109859 (-)
AMCG00002595 scgn,LOC106606120 coding downstream 283830 22020576 ~ 22039356 (-)
AMCG00002592 NA coding downstream 485714 21815465 ~ 21837472 (-)
AMCG00002605 taf2 coding upstream 5614 22354118 ~ 22380792 (-)
AMCG00002606 LOC106595460 coding upstream 33040 22381544 ~ 22389385 (-)
AMCG00002608 LOC106606163,LOC106595977 coding upstream 212613 22561117 ~ 22568988 (-)
AMCG00002610 NA coding upstream 250120 22598624 ~ 22620244 (-)
AMCG00002611 has2,LOC107673001,LOC107596747 coding upstream 345702 22694206 ~ 22705745 (-)
G124434 NA non-coding downstream 369515 21941177 ~ 21953671 (-)
G124431 NA non-coding downstream 397330 21925607 ~ 21925856 (-)
G124429 NA non-coding downstream 404271 21918700 ~ 21918915 (-)
G124402 NA non-coding downstream 528198 21794773 ~ 21794988 (-)
G124327 NA non-coding downstream 1206451 20979097 ~ 21116735 (-)
G124535 NA non-coding upstream 88382 22436886 ~ 22438729 (-)
G124582 NA non-coding upstream 249495 22597999 ~ 22598555 (-)
G124591 NA non-coding upstream 304978 22653482 ~ 22653719 (-)
G124669 NA non-coding upstream 648315 22996819 ~ 22999108 (-)
G124765 NA non-coding upstream 1307480 23655984 ~ 23663572 (-)
AMCG00002596 NA other downstream 420589 21901292 ~ 21902597 (-)
AMCG00002584 NA other downstream 644641 21647055 ~ 21678545 (-)
AMCG00002533 ulk4,LOC107704090 other downstream 4281613 17933464 ~ 18041573 (-)
G123829 NA other downstream 4333721 17922452 ~ 17989465 (-)
AMCG00002524 NA other downstream 4616897 17690008 ~ 17706289 (-)
G124719 NA other upstream 737490 23085994 ~ 23296115 (-)
AMCG00002629 sqle,LOC106579093,LOC102798444,LOC106605546 other upstream 833417 23181921 ~ 23192656 (-)
G124829 NA other upstream 1913061 24261565 ~ 24261823 (-)
G124848 NA other upstream 1943283 24291787 ~ 24339566 (-)
AMCG00002682 NA other upstream 3918548 26267052 ~ 26279621 (-)

Expression


Co-expression Network