AMCG00002630


Basic Information

Item Value
gene id AMCG00002630
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 23407566 ~ 23407966 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002630
GTTCGAAAGACAGATGTGTGCACCCCAGTGGTTGTGCGCATTGCTGTGTATAGAGGGCACATCGGGGATGGATTCATAGAGGCATCTGCTCTGGCCTGTGCTGTTACTGAGTGCTCATACATGGCACCAGCCGTCCGCAGGACTGACATCAGGCAGGGTGGAGTACGAGGAACTCTCTTTGTGCCACCAgGTCCTGGCCCGTTTCCTGTGGTTCTGGACTTGTGGGGTGGCGGAGGGCTGGTTGAGTACCACTCTGCTCTCCTTGCATCTCATGGCTACATGTCTCTGGCTTTGGACTATTATTCT

Function

GO:

id name namespace
GO:0006637 acyl-CoA metabolic process biological_process
GO:0016790 thiolester hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002630 True 306 mRNA 0.55 2 23407566 23407966

Neighbor

gene id symbol gene type direction distance location
AMCG00002620 NA coding upstream 339766 23056782 ~ 23067800 (+)
AMCG00002624 NA coding upstream 351850 23043824 ~ 23055716 (+)
AMCG00002619 NA coding upstream 373981 23028636 ~ 23033585 (+)
AMCG00002621 NA coding upstream 408081 22996873 ~ 22999485 (+)
AMCG00002613 NA coding upstream 455738 22947203 ~ 22951828 (+)
AMCG00002631 NA coding downstream 245006 23652972 ~ 23677437 (+)
AMCG00002635 lrp12,LOC107754924,LOC107714470,LOC107689529 coding downstream 559612 23967578 ~ 23985386 (+)
AMCG00002637 dpys coding downstream 589281 23997247 ~ 24007711 (+)
AMCG00002636 dpys,LOC107686378 coding downstream 611538 24019504 ~ 24036531 (+)
AMCG00002642 NA coding downstream 961918 24369884 ~ 24376014 (+)
G124687 NA non-coding upstream 130791 23218330 ~ 23276775 (+)
G124668 NA non-coding upstream 395566 23011435 ~ 23012000 (+)
G124667 NA non-coding upstream 404314 23002991 ~ 23003252 (+)
G124666 LOC106595597,LOC106595600,LOC106597717,LOC105016543 non-coding upstream 405334 23001788 ~ 23002232 (+)
G124658 NA non-coding upstream 415806 22990571 ~ 22991760 (+)
G124740 NA non-coding downstream 14007 23421973 ~ 23436320 (+)
G124750 NA non-coding downstream 198571 23606537 ~ 23606839 (+)
G124770 zfpm2 non-coding downstream 274047 23682013 ~ 23682226 (+)
G124774 NA non-coding downstream 421704 23829670 ~ 23829984 (+)
G124783 NA non-coding downstream 579736 23987702 ~ 24004361 (+)
G124689 NA other upstream 117031 23152648 ~ 23290535 (+)
AMCG00002623 sqle,LOC106579093,LOC106605546,LOC107686341 other upstream 227523 23068124 ~ 23180043 (+)
AMCG00002622 NA other upstream 417402 22987545 ~ 22990164 (+)
AMCG00002573 NA other upstream 3074536 20241848 ~ 20333030 (+)
AMCG00002561 NA other upstream 4273999 19130067 ~ 19133567 (+)
G124769 NA other downstream 269969 23677935 ~ 23681385 (+)
G124863 NA other downstream 1014286 24422252 ~ 24422613 (+)
AMCG00002650 NA other downstream 1353918 24761884 ~ 24776815 (+)
AMCG00002661 znf706,LOC103394271,LOC100712275,LOC103364770,LOC106534503,LOC107088369 other downstream 1966976 25374942 ~ 25384312 (+)
AMCG00002684 rpl30,LOC107702100,LOC107568279 other downstream 2867348 26275314 ~ 26279137 (+)

Expression


Co-expression Network