AMCG00002637 (dpys)


Basic Information

Item Value
gene id AMCG00002637
gene name dpys
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 23997247 ~ 24007711 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002637
ATGGGAAGTCAAAGCAGGATTCTGATAAAAGGAGGAAGAGTGGTGAATGAGGACTGCTCCGAGATCTGCGACGTCTACATTGAAGATGGCATCATCAAGGAGACTGGGTTAAACCTGCAAGTACCAGGGGGAGTGAAAGTGATTGATGCCACGGACAAATTGGTAATGCCTGGCGGGATCGATACGCACACTCACATGGAGCTGGCCTTCATGGGCACCAAAACAGTGGACGATTTCTACACTGGAACTAAGGCTGCTGTGGCTGGAGGAACCACAATGATCCTAGACTTCGTCATCCCTCCGAAGGGTACCTCCCTGCTGGAAGCCTATGAGAAGTGGAGGAGTACAGCAGATCCCAAAGTCTGTTGTGACTACTCCCTTCATGTTGCCGTCACATGGTGGAGTGATCAGGTTAAAAGGGACATGGAGACACTGGCCCAACAAAAAGGAGTCAACTCGTTCAAAATGTTTATGGCCTATAAAGATGTCTTCATGCTGCACGACGATGAGCTGTATGCTGTCTTTTCACAATGCAAAGAAATTGGAGCCATAGCGCAGGTTCACGCAGAGAATGGAGATTTGATAGCAGAG

Function

symbol description
dpys Predicted to enable dihydropyrimidinase activity. Predicted to be involved in pyrimidine nucleobase catabolic process. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in dihydropyrimidinase deficiency and purine-pyrimidine metabolic disorder. Orthologous to human DPYS (dihydropyrimidinase).

NR:

description
dihydropyrimidinase

GO:

id name namespace
GO:0006208 pyrimidine nucleobase catabolic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002637 True 591 mRNA 0.49 3 23997247 24007711

Neighbor

gene id symbol gene type direction distance location
AMCG00002635 lrp12,LOC107754924,LOC107714470,LOC107689529 coding upstream 11861 23967578 ~ 23985386 (+)
AMCG00002631 NA coding upstream 319810 23652972 ~ 23677437 (+)
AMCG00002630 NA coding upstream 589281 23407566 ~ 23407966 (+)
AMCG00002620 NA coding upstream 929447 23056782 ~ 23067800 (+)
AMCG00002624 NA coding upstream 941531 23043824 ~ 23055716 (+)
AMCG00002636 dpys,LOC107686378 coding downstream 11793 24019504 ~ 24036531 (+)
AMCG00002642 NA coding downstream 362173 24369884 ~ 24376014 (+)
AMCG00002646 NA coding downstream 498582 24506293 ~ 24517840 (+)
AMCG00002649 NA coding downstream 669595 24677306 ~ 24679989 (+)
AMCG00002657 NA coding downstream 931155 24938866 ~ 24949499 (+)
G124774 NA non-coding upstream 167263 23829670 ~ 23829984 (+)
G124770 zfpm2 non-coding upstream 315021 23682013 ~ 23682226 (+)
G124750 NA non-coding upstream 390408 23606537 ~ 23606839 (+)
G124740 NA non-coding upstream 560927 23421973 ~ 23436320 (+)
G124687 NA non-coding upstream 720472 23218330 ~ 23276775 (+)
G124823 NA non-coding downstream 253837 24261548 ~ 24261841 (+)
G124831 NA non-coding downstream 270723 24278434 ~ 24278640 (+)
G124856 NA non-coding downstream 380198 24387909 ~ 24392351 (+)
G124860 NA non-coding downstream 396765 24404476 ~ 24406978 (+)
G124862 NA non-coding downstream 403303 24411014 ~ 24411341 (+)
G124769 NA other upstream 315862 23677935 ~ 23681385 (+)
G124689 NA other upstream 706712 23152648 ~ 23290535 (+)
AMCG00002623 sqle,LOC106579093,LOC106605546,LOC107686341 other upstream 817204 23068124 ~ 23180043 (+)
AMCG00002622 NA other upstream 1007083 22987545 ~ 22990164 (+)
AMCG00002573 NA other upstream 3664217 20241848 ~ 20333030 (+)
G124863 NA other downstream 414541 24422252 ~ 24422613 (+)
AMCG00002650 NA other downstream 754173 24761884 ~ 24776815 (+)
AMCG00002661 znf706,LOC103394271,LOC100712275,LOC103364770,LOC106534503,LOC107088369 other downstream 1367231 25374942 ~ 25384312 (+)
AMCG00002684 rpl30,LOC107702100,LOC107568279 other downstream 2267603 26275314 ~ 26279137 (+)
G125219 NA other downstream 2354501 26362212 ~ 26369525 (+)

Expression


Co-expression Network