AMCG00002664


Basic Information

Item Value
gene id AMCG00002664
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 25459801 ~ 25506282 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002664
CCAAATCTCCCAAACTGAGCCCGGCGTCAGAGCCTCGCTGTTACCTGGCGGGAGGGGCGCTGCGGACAGGACGGCGTCACTAAGGTCTGCGGGCGTATAACCTGAGGCATAAACGCTGTGAAATGATTGAGAAATATACGTGTATAAACTAACCAGGCATGGATTTCAATATACCTATAACAGAAGATAAAGTTGATAAGTTGGGTGGACGTTATGTGgtgTACCATATTTTCCTGGATGggtttgtattatgtaaagttcGGTATAGCGACATGCACAGGTGGAATGAAAAGctGAGAAGAGTTTTTAAGGACTGTATCCCACGCTTCCCACCAAAATATTATCTGGCTATGACAGAGAAAATGGCAGACCAGAGGAGACACCACCTGGAACAGTACCTTCAGAAAGTGGCTGACATCTCCAGCATTGTAACTTCTGAGATTTTTGGCAAGTTCTTCAGAAAAATGCAACAGGAGACCTTCAGGATCACTGAGGTCAGTGCAGTCCTAGATGTGTTCCTTCCAGACTTGCAGAAGATCAGGGCAGACATTCAGACTTCAGACACCGCCCAAACACTGCTGGAGTTTTTAGAGGCTGCCTGGCATTTGAAGTACTATGGCTATATCCAGGTAGACCCCTGTACTTGCGATTACCCGGAGCCTGACTGCCCTGCTGTCGTTAGGtcAAAATCAAGCATAGATGACGAGGTCTTGCTGGATCTAAGTTTTGAATACTGCTTTGCCAACAAGTCTTTTGTGTATTAG

Function

GO:

id name namespace
GO:0031410 cytoplasmic vesicle cellular_component
GO:0043231 intracellular membrane-bounded organelle cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002664 True 764 mRNA 0.46 8 25459801 25506282

Neighbor

gene id symbol gene type direction distance location
AMCG00002663 LOC103371419 coding upstream 4027 25447921 ~ 25455774 (+)
AMCG00002662 ywhabl,LOC105896388,LOC102785026,LOC100692314,LOC107570839,LOC103145058,LOC105016475 coding upstream 25933 25413831 ~ 25433868 (+)
AMCG00002658 ncalda,ncald,LOC100692199,LOC105901278,LOC103042493,LOC106931336,LOC108268956 coding upstream 161633 25279992 ~ 25298168 (+)
AMCG00002659 NA coding upstream 325537 25129616 ~ 25134264 (+)
AMCG00002656 LOC107596739 coding upstream 481225 24966987 ~ 24978576 (+)
AMCG00002667 rnf19a,LOC102791892,LOC107698652,LOC106570794 coding downstream 50701 25556983 ~ 25573560 (+)
AMCG00002668 NA coding downstream 103412 25609694 ~ 25618765 (+)
AMCG00002669 NA coding downstream 116043 25622325 ~ 25645029 (+)
AMCG00002677 stk3,LOC103394381 coding downstream 520263 26026545 ~ 26030667 (+)
AMCG00002676 stk3,LOC100711192,LOC103135175,LOC106938036 coding downstream 535005 26041287 ~ 26044337 (+)
G125022 NA non-coding upstream 2914 25456656 ~ 25456887 (+)
G125011 NA non-coding upstream 130940 25328180 ~ 25328861 (+)
G125005 NA non-coding upstream 156646 25299701 ~ 25303155 (+)
G124999 NA non-coding upstream 320529 25138980 ~ 25139272 (+)
G124965 NA non-coding upstream 496321 24945238 ~ 24963480 (+)
G125109 NA non-coding downstream 347876 25854158 ~ 25862306 (+)
G125220 NA non-coding downstream 866297 26372579 ~ 26376125 (+)
G125288 NA non-coding downstream 1147703 26653985 ~ 26655168 (+)
G125290 NA non-coding downstream 1148957 26655239 ~ 26655457 (+)
G125296 NA non-coding downstream 1155442 26661724 ~ 26662436 (+)
AMCG00002661 znf706,LOC103394271,LOC100712275,LOC103364770,LOC106534503,LOC107088369 other upstream 75489 25374942 ~ 25384312 (+)
AMCG00002650 NA other upstream 682986 24761884 ~ 24776815 (+)
G124863 NA other upstream 1037188 24422252 ~ 24422613 (+)
G124769 NA other upstream 1778416 23677935 ~ 23681385 (+)
G124689 NA other upstream 2169266 23152648 ~ 23290535 (+)
AMCG00002684 rpl30,LOC107702100,LOC107568279 other downstream 769032 26275314 ~ 26279137 (+)
G125219 NA other downstream 855930 26362212 ~ 26369525 (+)

Expression


Co-expression Network