Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00002670 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 25746083 ~ 25752614 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko00310 | Lysine degradation |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00002670 | True | 471 | mRNA | 0.55 | 3 | 25746083 | 25752614 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002671 | vps13b,LOC104942627 | coding | downstream | 69433 | 25647813 ~ 25676650 (-) |
| AMCG00002666 | NA | coding | downstream | 134589 | 25604167 ~ 25611494 (-) |
| AMCG00002665 | NA | coding | downstream | 143033 | 25573833 ~ 25603050 (-) |
| AMCG00002660 | NA | coding | downstream | 411421 | 25299701 ~ 25334662 (-) |
| AMCG00002653 | NA | coding | downstream | 779674 | 24963795 ~ 24966409 (-) |
| AMCG00002674 | LOC106594737,LOC104943785 | coding | upstream | 35769 | 25788383 ~ 25822702 (-) |
| AMCG00002672 | vps13b | coding | upstream | 183588 | 25936202 ~ 25989563 (-) |
| AMCG00002673 | osr2 | coding | upstream | 250201 | 26002815 ~ 26005357 (-) |
| AMCG00002681 | kcns2,LOC102221451 | coding | upstream | 384343 | 26136957 ~ 26138496 (-) |
| AMCG00002680 | NA | coding | upstream | 455656 | 26208270 ~ 26234043 (-) |
| G125075 | NA | non-coding | downstream | 133786 | 25610117 ~ 25612297 (-) |
| G125035 | LOC108241327,LOC106932681,LOC103371419,LOC103151587 | non-coding | downstream | 292085 | 25451215 ~ 25453998 (-) |
| G125036 | NA | non-coding | downstream | 312355 | 25374880 ~ 25433728 (-) |
| G124975 | NA | non-coding | downstream | 795725 | 24948150 ~ 24950358 (-) |
| G124907 | NA | non-coding | downstream | 1168952 | 24576165 ~ 24577131 (-) |
| G125160 | NA | non-coding | upstream | 373940 | 26126554 ~ 26130462 (-) |
| G125178 | NA | non-coding | upstream | 452278 | 26204892 ~ 26205871 (-) |
| G125200 | NA | non-coding | upstream | 489640 | 26242254 ~ 26242531 (-) |
| G125269 | NA | non-coding | upstream | 743335 | 26495949 ~ 26498450 (-) |
| G125291 | NA | non-coding | upstream | 903014 | 26655628 ~ 26655871 (-) |
| G124848 | NA | other | downstream | 1406517 | 24291787 ~ 24339566 (-) |
| G124829 | NA | other | downstream | 1484260 | 24261565 ~ 24261823 (-) |
| G124719 | NA | other | downstream | 2449968 | 23085994 ~ 23296115 (-) |
| AMCG00002629 | sqle,LOC106579093,LOC102798444,LOC106605546 | other | downstream | 2553427 | 23181921 ~ 23192656 (-) |
| AMCG00002596 | NA | other | downstream | 3843486 | 21901292 ~ 21902597 (-) |
| AMCG00002682 | NA | other | upstream | 514438 | 26267052 ~ 26279621 (-) |
| AMCG00002688 | NA | other | upstream | 530726 | 26283340 ~ 26305923 (-) |
| AMCG00002694 | NA | other | upstream | 860862 | 26613476 ~ 26664767 (-) |
| AMCG00002705 | klhl38a,LOC103030765,LOC106570780,LOC103376378,LOC108424967,LOC107724354,LOC107565193,LOC107702087,LOC104967054 | other | upstream | 1102279 | 26854893 ~ 26875246 (-) |
