AMCG00002689


Basic Information

Item Value
gene id AMCG00002689
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 26318343 ~ 26319376 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002689
ATGTGGATAGCATCCAGCAGTCAACCAATCAACATAGTTGAAGATGATGGGTTAGAAAAAGTTACTCAAATTGCTCTTGATTCATATAAATACCGCCTTCCAACcagaaatacaataacaacacacattaaacaaatgtacgACGAAGAGAAAATGAGAATTGAAAGCGAACTTGAAAAAGCAGAGTTTTTGAGTTTGACTAGTGATTTGTGGACTTCTGTTGCTAATGACAGTTACTTGGGGGTCACTGGGCACTGGATTGACAAGCAGTGGAGAATTCGAAATGCATCTCTGCAAAAAGCATTGCAAATTTCTTTTATTGACAATCTTCTCTCATGGAGCCGTAAAATAGATGTTCATTTTATACACAGCCCTGCAAGCAATGTTGAACTGTGTGCAAAGGAAGTAACAGAGCTCGGACTTAGCCATAAGCTGGAACAGGATGTCCCCACGCAGTggaacaTATCTCATTTGCGACTACAGATGCCATTTTCAGACAACGATCCTGCTTTTATTGCTCGATTAAAACATACTCTTATTGATGACTTGGCTGAAAGAATGATCAACTGGCCACAAATCGAGAAATACAAAGTGTCTACAGACCTTGATCCTCGATTCAAGACTCTCCAATGCATTTCTATGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002689 True 645 mRNA 0.40 3 26318343 26319376

Neighbor

gene id symbol gene type direction distance location
AMCG00002679 NA coding downstream 58037 26242687 ~ 26260306 (-)
AMCG00002680 NA coding downstream 84300 26208270 ~ 26234043 (-)
AMCG00002681 kcns2,LOC102221451 coding downstream 179847 26136957 ~ 26138496 (-)
AMCG00002673 osr2 coding downstream 312986 26002815 ~ 26005357 (-)
AMCG00002672 vps13b coding downstream 328780 25936202 ~ 25989563 (-)
AMCG00002687 laptm4b,LOC107702097,LOC107724295,LOC107394696,LOC107565197,LOC105907721 coding upstream 3522 26322898 ~ 26338157 (-)
AMCG00002690 NA coding upstream 44586 26363962 ~ 26375896 (-)
AMCG00002685 rrm2b,LOC107556385,LOC108425040,LOC107394698,LOC106956493 coding upstream 63135 26382511 ~ 26390982 (-)
AMCG00002686 ubr5,LOC102786672 coding upstream 76506 26395882 ~ 26452474 (-)
AMCG00002693 NA coding upstream 276755 26596131 ~ 26608752 (-)
G125200 NA non-coding downstream 75812 26242254 ~ 26242531 (-)
G125178 NA non-coding downstream 112472 26204892 ~ 26205871 (-)
G125160 NA non-coding downstream 187881 26126554 ~ 26130462 (-)
G125075 NA non-coding downstream 706046 25610117 ~ 25612297 (-)
G125035 LOC108241327,LOC106932681,LOC103371419,LOC103151587 non-coding downstream 864345 25451215 ~ 25453998 (-)
G125269 NA non-coding upstream 176573 26495949 ~ 26498450 (-)
G125291 NA non-coding upstream 336252 26655628 ~ 26655871 (-)
G125297 NA non-coding upstream 342328 26661704 ~ 26663029 (-)
G125361 fam91a1,LOC106570778,LOC106589122,LOC107702086,LOC107724353 non-coding upstream 594331 26913707 ~ 26915965 (-)
G125376 NA non-coding upstream 658308 26977684 ~ 26977920 (-)
AMCG00002688 NA other downstream 12420 26283340 ~ 26305923 (-)
AMCG00002682 NA other downstream 38722 26267052 ~ 26279621 (-)
G124848 NA other downstream 1978777 24291787 ~ 24339566 (-)
G124829 NA other downstream 2056520 24261565 ~ 24261823 (-)
G124719 NA other downstream 3022228 23085994 ~ 23296115 (-)
AMCG00002694 NA other upstream 294100 26613476 ~ 26664767 (-)
AMCG00002705 klhl38a,LOC103030765,LOC106570780,LOC103376378,LOC108424967,LOC107724354,LOC107565193,LOC107702087,LOC104967054 other upstream 535517 26854893 ~ 26875246 (-)

Expression


Co-expression Network