AMCG00002690


Basic Information

Item Value
gene id AMCG00002690
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 26363962 ~ 26375896 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002690
ATGGCAGCGAGCTGGCAGGACGTAGCGATTCAGCAGGCCGAGTTGATCTCGAGTCGTCTGAGGGAGCTACTGTCTTTGTGCCAGGGCCTACTGAACTCCGAGCTCGGGGTGGACCTGGGGCTGAAGCCGGAGCGCTATCCGTCATGGGTTCTCCTTCTGACGGCGTTCCTCGGGGTTCTGGTGATCGTGGTGTTCTGGGCCGCGGCCTGTGTCGGGCTGTTCGGTGGGAGGAAGCGAGGGGCCAGAGAAATCGAGCAAAGCAGTCAAAGCACAAAGGCGTTGGTGCCCAAGATTGTTAAAGCTGAggaacagaagaagaagaacaaaaagaaacctGTTGAAAAGAAATCTCAGCCAAATGGGCGCACAGTTGTTGAGCTACCAGAGGAAGATGTTAAAGCCACCATTGAAGAACTCCTAAAACAGGCACCAGACATTAAGACTGAAAAGacaaagaaaaacaaaaagaagctGAAAGCTGAATTGAAAGAAACCCAACTTAACACCTCGGCAAATGGAAAAGAGCATGATGAAGGAGCATGGGAGACTAAGATCAGTAACCGTGAGAAGAGGCAGCAGCGCAGGAGAGACAAGGTGTTGAATGAGGACTCGAGCAGCCCTGGAGCCGAATCTCCAGCTAGCGTGCCCATGGAGCTCCCCACGGCAATAACTGTGGTTCCAGTCAGCGTGAAGAAGAGCAAAGTGTCAGCCAGCTGGAATGAAACGGCCACAGTGAATGGTGGAGGATGGAACAACAAGGTTATGAAGATCCCAGTTTCCAGTGTGGACAGAGAGAACTGCACTGCATGGGGTCTGGAAACTGAAGATGGCCTTTCCACATTGGACCCCAGCTCGGACTGGAATGCTCCCTCTGAATTGTGGGGGAATTACGAGGAGCCAAAGGCCCCTGCTCCCACTCATCTTGAGAAACCTGTGATGGAGGTTAAGAAGATATCTGATgatgaaaaagagaaaactgaCTCTGCTGCTCCTGGAAGTGGAAAgtcaaaaaagaagaagaagaagaagaagaaacaagaCGAAGAGGCTAACACACAAgaaACCGAAGAGCAAGAAAAAGAATCTTTGGCAGAGGTTGAGGAGGTGACTCTGTCAGCCCATCCTGAAAAGGAGAGTATCCTGCCTGTCCAGAGCACTGCTGTGAAGAAACTTGCACAAAAAGAGCTGGCTAGTCCTGTACTGGAGAGTGTTTCCAAGAAGACCCCTTCACAAGTGCCACAGAGGCTATCGGATCCAGAGCCTCCAGTTTCTACTGCTAAACAAAACAGCATGCCTCCACCTTCACAGAAAAAATCAGAAGAGAACTGGGAATCACCAAAGCAAgtcaaaaagaagaagaaagcaagACGAGAAACATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002690 True 1380 mRNA 0.50 10 26363962 26375896

Neighbor

gene id symbol gene type direction distance location
AMCG00002687 laptm4b,LOC107702097,LOC107724295,LOC107394696,LOC107565197,LOC105907721 coding downstream 25805 26322898 ~ 26338157 (-)
AMCG00002689 NA coding downstream 44586 26318343 ~ 26319376 (-)
AMCG00002679 NA coding downstream 103656 26242687 ~ 26260306 (-)
AMCG00002680 NA coding downstream 129919 26208270 ~ 26234043 (-)
AMCG00002681 kcns2,LOC102221451 coding downstream 225466 26136957 ~ 26138496 (-)
AMCG00002685 rrm2b,LOC107556385,LOC108425040,LOC107394698,LOC106956493 coding upstream 6615 26382511 ~ 26390982 (-)
AMCG00002686 ubr5,LOC102786672 coding upstream 19986 26395882 ~ 26452474 (-)
AMCG00002693 NA coding upstream 220235 26596131 ~ 26608752 (-)
AMCG00002708 NA coding upstream 446069 26821965 ~ 26831030 (-)
AMCG00002707 kiaa0196 coding upstream 687865 27063761 ~ 27099867 (-)
G125200 NA non-coding downstream 121431 26242254 ~ 26242531 (-)
G125178 NA non-coding downstream 158091 26204892 ~ 26205871 (-)
G125160 NA non-coding downstream 233500 26126554 ~ 26130462 (-)
G125075 NA non-coding downstream 751665 25610117 ~ 25612297 (-)
G125035 LOC108241327,LOC106932681,LOC103371419,LOC103151587 non-coding downstream 909964 25451215 ~ 25453998 (-)
G125269 NA non-coding upstream 120053 26495949 ~ 26498450 (-)
G125291 NA non-coding upstream 279732 26655628 ~ 26655871 (-)
G125297 NA non-coding upstream 285808 26661704 ~ 26663029 (-)
G125361 fam91a1,LOC106570778,LOC106589122,LOC107702086,LOC107724353 non-coding upstream 537811 26913707 ~ 26915965 (-)
G125376 NA non-coding upstream 601788 26977684 ~ 26977920 (-)
AMCG00002688 NA other downstream 58039 26283340 ~ 26305923 (-)
AMCG00002682 NA other downstream 84341 26267052 ~ 26279621 (-)
G124848 NA other downstream 2024396 24291787 ~ 24339566 (-)
G124829 NA other downstream 2102139 24261565 ~ 24261823 (-)
AMCG00002629 sqle,LOC106579093,LOC102798444,LOC106605546 other downstream 3171306 23181921 ~ 23192656 (-)
AMCG00002694 NA other upstream 237580 26613476 ~ 26664767 (-)
AMCG00002705 klhl38a,LOC103030765,LOC106570780,LOC103376378,LOC108424967,LOC107724354,LOC107565193,LOC107702087,LOC104967054 other upstream 478997 26854893 ~ 26875246 (-)

Expression


Co-expression Network