AMCG00002693


Basic Information

Item Value
gene id AMCG00002693
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 26596131 ~ 26608752 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002693
CTTTGCGGAATACGGCTGAGATGAAAGGACTTGTCGATGAACCAAACTACACTATTGACCTTTTGGAGGAAGGCACGATGCTTGGAGATGTCATTGATAACCATATTTATGAGCAGGCTCTGGCTGAaaagaatgcattttttgtggCCGACCTTGGGAACATAGTAAAGAAGCATTTTCAGTGGCAAAACATCATGGCACCAATCAAGCCCTTCTTTGCTGTGAAGTGTAACACAAGCCAGGCTGTCATTGAGATCCTGGCAGCCCTTGGGACTGGCTTTGCCTGTGCAAACAAgAGTGAAGTTGCTCTGGTACAGGGCTACGGCATTGCTCCAGAAAACATCCTCTATACTGGCATGTGTAAACAACTGTCCCACATGAAATATGCTGCTAAGAATGGCATTGATCTCCTTGCCCACAGCGAGGGAGAGGAGATGAGCATGGTTTTTGGCTCCACACTCAAGAACTGCAGGCACCTGCTGGAAAGTGCAAAGGAGATGGGTGTTGAAGTTGTGGGGAAACTATCTCCTTCCCCCAGATTCCATATTTCAAGCTCTTGCAAGGATCCACAGGCCTATGTTCATGCAATATCTGATGCTCGCTGTGTCTTTGACATGGGGGAGGAATTTGGCTTCAATATGAGCTTTCTGGATATTGGTGGTGGATTCTGTGGGTCCAGCATTCAGTTGGATGAGATATACAGCACAATCCGGCCACTTCTAGATGTCTATTTCCCAACGGACTCTGGAGTGCATGTTATTGCTGAGCCTGGAAGTTACTTTGTAACTACTTCTTTCAGTCTGGCAGTCAATATTATAGCCAAGAAAGTGGTTGCGAGGGATCAGGATGATCAGCCTCAGGAAATTAAACCATCTCTGAATGATGAGCCAGCGTTTATGTATTATATGAATGATGGGGTGTTTGGGTCTTTTGCCAACAAGTTACTGGAAAAAACTATTGCTGCCCCTTCTGTTCATAAGAAATTAAGTAAGGAAGAAGCAGTATTTGCCAGCAGCTTGTGGGGCCCCTCTTGTGATGGTCTGGATCAAGTTGTTGAACACTGCCTATTGCCTGAACTGAATGTTGGAGACTGGGTTGTTTTTAACAACATGGATATGTTTTATAATAGGTACGAGATGCAGGATGCTGGAATTACACTGGACACCACAATGAAGAATTTCTTACTGGTTCCATCTTGCTTTCAATTAAGTCATGAAGATATTTCCACCCCAGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002693 True 1235 mRNA 0.45 10 26596131 26608752

Neighbor

gene id symbol gene type direction distance location
AMCG00002686 ubr5,LOC102786672 coding downstream 143657 26395882 ~ 26452474 (-)
AMCG00002685 rrm2b,LOC107556385,LOC108425040,LOC107394698,LOC106956493 coding downstream 205149 26382511 ~ 26390982 (-)
AMCG00002690 NA coding downstream 220235 26363962 ~ 26375896 (-)
AMCG00002687 laptm4b,LOC107702097,LOC107724295,LOC107394696,LOC107565197,LOC105907721 coding downstream 257974 26322898 ~ 26338157 (-)
AMCG00002689 NA coding downstream 276755 26318343 ~ 26319376 (-)
AMCG00002708 NA coding upstream 213213 26821965 ~ 26831030 (-)
AMCG00002707 kiaa0196 coding upstream 455009 27063761 ~ 27099867 (-)
AMCG00002704 kiaa0196 coding upstream 505453 27114205 ~ 27119264 (-)
AMCG00002709 esrp1,LOC107593677 coding upstream 532373 27141125 ~ 27141425 (-)
AMCG00002706 NA coding upstream 631584 27240336 ~ 27244422 (-)
G125269 NA non-coding downstream 97681 26495949 ~ 26498450 (-)
G125200 NA non-coding downstream 353600 26242254 ~ 26242531 (-)
G125178 NA non-coding downstream 390260 26204892 ~ 26205871 (-)
G125160 NA non-coding downstream 465669 26126554 ~ 26130462 (-)
G125075 NA non-coding downstream 983834 25610117 ~ 25612297 (-)
G125291 NA non-coding upstream 46876 26655628 ~ 26655871 (-)
G125297 NA non-coding upstream 52952 26661704 ~ 26663029 (-)
G125361 fam91a1,LOC106570778,LOC106589122,LOC107702086,LOC107724353 non-coding upstream 304955 26913707 ~ 26915965 (-)
G125376 NA non-coding upstream 368932 26977684 ~ 26977920 (-)
G125415 NA non-coding upstream 523134 27131886 ~ 27197333 (-)
AMCG00002688 NA other downstream 290208 26283340 ~ 26305923 (-)
AMCG00002682 NA other downstream 316510 26267052 ~ 26279621 (-)
G124848 NA other downstream 2256565 24291787 ~ 24339566 (-)
G124829 NA other downstream 2334308 24261565 ~ 24261823 (-)
AMCG00002629 sqle,LOC106579093,LOC102798444,LOC106605546 other downstream 3403475 23181921 ~ 23192656 (-)
AMCG00002694 NA other upstream 4724 26613476 ~ 26664767 (-)
AMCG00002705 klhl38a,LOC103030765,LOC106570780,LOC103376378,LOC108424967,LOC107724354,LOC107565193,LOC107702087,LOC104967054 other upstream 246141 26854893 ~ 26875246 (-)

Expression


Co-expression Network