AMCG00002706


Basic Information

Item Value
gene id AMCG00002706
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 27240336 ~ 27244422 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002706
ATGTCAAATTCAtgcattgtttctttgtttaaacaGGAATTTTCCAAAGAGGATGACAGCCTTGAGACTTTATTGGAGAATGTTGTTGGACTCCGGCAGATGCTAGAGAGTGCAACTGATTCTCCACCTTCAAATGAACAAGAGGCAGAACCCTCACTGCCTGCCACTGAGAGTCTGCCTGTCCAGTTCAATAACAGGACTGTTTATGTCCTCTCTGATATGTTTGATGACCAGCTGAAGGCACTATGGTTTTCTCCCTTCCAGTCTGAAGAAATGGATGCTGACCTAGATACAGTGAAGGTGGATTTGGTGGGTCTATCAGAGGAGTGCTGCCCTGATTTTGACTTGAAGGCAGAGTTGGAGAAATCTTTCCTGACAGAGCCCACCTCCCCTGGACGGACAAAGGCACCCAAAGGTTTCAAGCTTGGTAAACACAAACACGAGACATTCATCACCTCCAGGTATAGAGCTactatAAAACAGAACACCAGCCGTCCTCCATCAATGCACGTGGATGATTTTGTGGCAGCAGAAATCAAAGACATTGGGCCCCCCACAGGCTTACTTCAGCCCAAAAGGACACCTAAGGGCTCCCCAAAGGTGCCCACTCGAGGGCTCTTCACCGGGAACAGAGGCAGCAGGGGAGTCTTCCATAGCCAGGCACGGTTCTTCACTCCCCCAGCTCCCAAAGGCAATTATAACAGGCGAGAAGGAGGCCGAGGGTCCAGCTGGAGTGCTCAGGTTGTCCCAGTGACACACCGAGGGACATACAGCGAGGCCAGGGGTGGTCAGAGCAACTTCACTAGAGGACCTCTCCCATCCAGACAACCTTCAGCA

Function

GO: NA

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002706 True 837 mRNA 0.50 5 27240336 27244422

Neighbor

gene id symbol gene type direction distance location
AMCG00002709 esrp1,LOC107593677 coding downstream 98911 27141125 ~ 27141425 (-)
AMCG00002704 kiaa0196 coding downstream 121072 27114205 ~ 27119264 (-)
AMCG00002707 kiaa0196 coding downstream 140469 27063761 ~ 27099867 (-)
AMCG00002708 NA coding downstream 409306 26821965 ~ 26831030 (-)
AMCG00002693 NA coding downstream 631584 26596131 ~ 26608752 (-)
G125415 NA non-coding downstream 43003 27131886 ~ 27197333 (-)
G125376 NA non-coding downstream 262416 26977684 ~ 26977920 (-)
G125361 fam91a1,LOC106570778,LOC106589122,LOC107702086,LOC107724353 non-coding downstream 324371 26913707 ~ 26915965 (-)
G125297 NA non-coding downstream 577307 26661704 ~ 26663029 (-)
G125291 NA non-coding downstream 584465 26655628 ~ 26655871 (-)
G125473 NA non-coding upstream 121040 27365462 ~ 27365663 (-)
G125474 NA non-coding upstream 124186 27368608 ~ 27368869 (-)
G125475 NA non-coding upstream 126172 27370594 ~ 27370875 (-)
AMCG00002705 klhl38a,LOC103030765,LOC106570780,LOC103376378,LOC108424967,LOC107724354,LOC107565193,LOC107702087,LOC104967054 other downstream 365090 26854893 ~ 26875246 (-)
AMCG00002694 NA other downstream 575569 26613476 ~ 26664767 (-)
AMCG00002688 NA other downstream 934413 26283340 ~ 26305923 (-)
AMCG00002682 NA other downstream 960715 26267052 ~ 26279621 (-)
G124848 NA other downstream 2900770 24291787 ~ 24339566 (-)

Expression


Co-expression Network