G120201


Basic Information

Item Value
gene id G120201
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 122542 ~ 123168 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU150611
tgacaGCATGTAAATGAATGAGACTACACCAGCATAGTCAACATTTCCATTGATCTCTCACAATATTACAGgatgcaaacaaaatcaatccaAACATGCACACATTAGATACAACATACACTTAGGGGTAATAAAGAACAGGGTAACAAAATACCTGTTCAATGAGTTCATGTCCTCAAGGATTTGTGTAAAAGGTGCAGAATCCAACACACGAAGAGCCAGAGCGAAAGTCAACATTCAAAACATGTACACGAGAAGCAAAGCACACAGCAGCTCGTCTATGGACTAGAGACTGAGACCCCTGTGATCAAGAGGCCCCTGGTGTAAATCTGCAGTGAACTGTGGAGGCAGATTGAAGTGCGTCGAATAAGGAAGAAGAGCTGTGTAACCCGTCACCAACAGAAGAGCCACGTGGCCGTCATGAGCAGGGCTGCTAGTCTGTGTTTACAAGACAGGCTGTGCCCGGGCCTTTAGAGAGCTAGTTACGCCCCTGTCAGacatatataggcctatataaaaacacaacaacagaaactTCAGCACAGATAAGGTGTATCTAAGTACTCAGCAGGAGAACATGTTTCAAGGTGGGTCTATTGGTCTGTAAtgtcaaaaaaatgaaaataa

Function

NR:

description
PREDICTED: caldesmon-like isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150611 True 627 lncRNA 0.43 1 122542 123168

Neighbor

gene id symbol gene type direction distance location
AMCG00001998 LOC104943579,LOC101075650 coding upstream 50671 57268 ~ 71871 (+)
AMCG00001995 NA coding upstream 92002 29548 ~ 30540 (+)
AMCG00001997 NA coding upstream 94961 25438 ~ 27581 (+)
AMCG00002001 NA coding downstream 132144 255312 ~ 263137 (+)
AMCG00002002 NA coding downstream 144640 267808 ~ 275768 (+)
AMCG00002000 ddx19,LOC108411521,LOC107699345,LOC103386132,LOC107556002,LOC108255077 coding downstream 157039 280207 ~ 289733 (+)
AMCG00002005 cpsf3l coding downstream 175343 298511 ~ 316562 (+)
AMCG00002009 NA coding downstream 211268 334436 ~ 398486 (+)
G120193 ube2j2,LOC107599097 non-coding upstream 19269 100119 ~ 103273 (+)
G120254 NA non-coding downstream 544571 667739 ~ 668057 (+)
G120494 NA non-coding downstream 1751044 1874212 ~ 1876528 (+)
G120516 NA non-coding downstream 1774766 1897934 ~ 1955361 (+)
G120536 NA non-coding downstream 1873259 1996427 ~ 2005914 (+)
G120563 NA non-coding downstream 2050302 2173470 ~ 2174499 (+)
AMCG00002019 NA other downstream 559502 682670 ~ 992764 (+)
G120518 NA other downstream 1800854 1924022 ~ 1940816 (+)
AMCG00002076 NA other downstream 2728986 2852154 ~ 2854127 (+)
G120742 NA other downstream 2833740 2956908 ~ 2959475 (+)
AMCG00002098 NA other downstream 3410646 3533814 ~ 3542177 (+)

Expression


Co-expression Network