G120334


Basic Information

Item Value
gene id G120334
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 686944 ~ 689958 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU150787
GAAAATGACCCCTTTTTGATATAAAGCATGAAACAGTCCTGTTAGCCATGCAGTCGCATTCAACAGCTCTGTGCATGTTCTGTTCATGTGCTCTTGTTTTGCAGTGATTTGCAGGACCAGTTCATCTCTCCCTGTGGGGCGTGCCGACAGGTCATGAGAGAGTTCGGCACAGACTGGGATGTGTTTCTGTCAAAGCCTGACGGCACCTACGTGCAGATGACGGTGGATGAGCTGCTGCCCATGTCGTTTGGGCCGGATGAtctgaagagaaagaaagtgttttCCATCCAAAACGGATATTAAGAGCTTGGTTTTAAATGCTGTACACAGTCAATAAGGGTGCTGGCTTGTGTGCTTTAAAGCCAAGCTCCCACAAAGCTTTGGCCCTAGACACACAAagatatgtgtatttattggaGCCACGGTACCTCTTTTTCTCTTAGACATTAGAATCACTAGCTGGGATTCAATTGGATGCACCTGctaatataaaactacaaacctaCACTAGGTAGgggcttttgttttcttaatttttcttctCAAAAGTAGAACTGCTTTGAAGTgcaagtttgtagtttgctattggcggctgggtcaaagttttgattgaatctggCCCACAGGAATGACCTTCACTGCAGCTGAAGTGTGGAGACTCAGGACTCATTTGTGTACCAAACCCTACTACATTTTATCAGAATACTGAAGTTAGCCGCCCTACAGAACAACGCAGGAACTAGATTATACAATACATTCCATTGTGGACCAAATCATgttttgtgatgcatttaaatatacagtgcatcagATAAATACTACAgataatgttaatatttattgCGATTGTTTcataaatgtgtgaatatatgAAATGCAGTTCTTGATTTCAGTCACATTTTTCTAAGAATTGTGCAACAATTACCAAACCAATCCATGGACCACTAATGATGTTTCAAACAAGGAGCAGAAATCTGCGGTTTGTGTTAATAGTTTGAGTATCAATGATGAATGCATTTGAATGCATTGGGGTTAAGCTTTtctttatgtaaatataatgaaacatgtattaaatgttttgcataataaaaaaacatgttatgttGTGG

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150787 True 1109 lncRNA 0.40 2 686944 689958

Neighbor

gene id symbol gene type direction distance location
AMCG00002021 NA coding downstream 23492 655746 ~ 663452 (-)
AMCG00002011 NA coding downstream 143860 536355 ~ 543084 (-)
AMCG00002010 NA coding downstream 154637 529004 ~ 532307 (-)
AMCG00002012 NA coding downstream 183051 496833 ~ 503893 (-)
AMCG00002013 NA coding downstream 190181 398117 ~ 496763 (-)
AMCG00002020 NA coding upstream 27173 717131 ~ 729872 (-)
AMCG00002026 NA coding upstream 220976 910934 ~ 918704 (-)
AMCG00002031 NA coding upstream 302006 991964 ~ 1001586 (-)
AMCG00002036 NA coding upstream 630037 1319995 ~ 1325849 (-)
AMCG00002035 cldn19,LOC106583106 coding upstream 639589 1329547 ~ 1350758 (-)
G120320 NA non-coding downstream 266019 420588 ~ 420925 (-)
G120399 NA non-coding upstream 295445 985403 ~ 987224 (-)
G120431 NA non-coding upstream 535761 1225719 ~ 1228159 (-)
G120477 NA non-coding upstream 777981 1467939 ~ 1528085 (-)
G120513 NA non-coding upstream 1184255 1874213 ~ 1876061 (-)
G120527 NA non-coding upstream 1242295 1932253 ~ 1975025 (-)
AMCG00002044 NA other upstream 796593 1486551 ~ 1490567 (-)
AMCG00002078 NA other upstream 2155424 2845382 ~ 2847937 (-)
AMCG00002085 NA other upstream 2231294 2921252 ~ 2931018 (-)
G120748 NA other upstream 2305550 2995508 ~ 3004917 (-)
AMCG00002094 vamp3,LOC107582408 other upstream 2423484 3113442 ~ 3128440 (-)

Expression


Co-expression Network