G120692 (utp3,LOC102785935)


Basic Information

Item Value
gene id G120692
gene name utp3,LOC102785935
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 2861915 ~ 2866024 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU151234
TGGaaatagatgtttttatttgaaaggtGATACCCAGTGATTTCTGCACCACTGAGATTACAAACAGAATCAAAGTCCGattcatgttatttaaaagATACAGATTGCACTTAAGCCGAACTGAGCCACTGCTGTCAGGGACCGTGCAGCAACAGCTCTTTATAATTTGGAGACCCTTAATGTTCCCTAAACAGCCCTGCTGACCCCGTGGCTGAAACCTGAAGGGCTCCTCTGGTCATTGCTCTGCCGCGTGATTCTCCCTGCTTGCCCACCCCGGACCCTCTGTAGCCACTGACAAGAGGACTGGGAGAAGCCAGGCCTCAGTTACTTGAGCTTAATACTCTTCTTGACTCCGGCGCGGATGCCAGACAGCTCTCCCCCGTACCGGTGCTCCTCCCTGCGGACCTCGCGGACCTGGCCCTTTCTGCGGATCTTGGCTCTCCTGAACTTCTCCCTGTGCTTGACTCTGGGGTTCCTGTCAATCTTCTTTCTCTTGGGTGTGAGACCTTTGTTCTTGGCCATCTGGTACGTGATGCCTCTCTTTGCATCTGGGTCGAGCTCCACCTCTTCTCCTTCCGCCAATCCTTCCTCAGTTTCTTGGCTGttcttcttcctcttcagtTTCAGCCTCTCCTCCATGTCTTTGTAGAAGCGAAGCGCGGCCTCCTCGTCCATGTCGGAGTCGGAGTCGGCAGCAGGCTGGAGACCCGCGCGCTCAGCCGCCTCTGCTGGTGGCCGTTTTGCCCCCTGCCTccttcctgccagtcctgcccTGCTGCGACTCAGAGAGAAGCTGGCGCAGCTCGGGGGACAGCCGTGCATCCAGAGCGCCCAGGTCATTGATCAGCTGCAGGGACAAACCACAGCCCTCACCACACCGCCATTTCTGCAATCACCCCCTTCCTCCGTCTAAAAATGGTTCGGTCCAGATCCTGTTACCGACCTACAGCGGCCAATCTGTGTCGCGTCTTCATGCTGCTTAAACTCAACGCaactgacaaacacaaatgtagATCCTGCGATACTTCACACCGCTGGCATTAAGTGTCCTGAACCGTCATTGGTAAACAATTCTACGAACAGGATGCCATTCATACACAAACCACAGAGACTCACATTCCTGTAGGTGACCAGCCGCTCGATCACAGGGTGGTTGTGTGCCGGGATGCGCTTCGCCTTCAGGACCAGGTAAAAACTGATATTGGTGCAATAGctgaggagagaggaaagacaTGAGCACGGCCCTTCTACAGTCGCTTCCTGCATCGTTACACCAGATACCAGAGAGATCAGGGCCGAGAGACATGAGTGACACATGCGTCGGCCTAAACAAGACCAAGAACACCGATCTGGCACAAGAGAgcgtaaaaacaaaaccagcacaAGAGAAAGGCATTGTCATTATTTGGTAACCATTTAAATCACCACTTGTTCTTaaactcattttttattttgaatttgcagTTTATTGAGGAGTATTTAATTCagtattaaaactattttactattattgtttgtttgcacCTGCCGGATTTAAGGGCCATTTCAatgttaatttcatttaattgttcaGAGggagttttatacattttatactttaaaaatattaagctTTTAATAGCTTTTTGGTTGCCTGGTCAGTTCTTCAGCTCAGTGTCTGTGTTATAGTCCCATACCGTGCCATCTAGTGGCCAAATATCATACTGCAGTTCCCATTGTGTTCCAGACTTCTGCTCAAGTTCAGGTTGCAGCTAACAGGTCCCTCTTTGTTTGGTCGTACATGTGTGTGCctatataaacatttacaagaCAGTAGGCTTTAGTCTATGTTAGTCCGGGGGCTACAGTGAGTGGCCCCCTGAGTCAAATCATGCTTTAGGGCCCCCAAAAGACTAGAAACAGCCCTGAGAGAGATGATCTAGTGGAAACCAGATCACTTTTGCAAGAGGAATGTTCCCGATTTCTAGTTTCGGTTCAATCCTACACAATAAAGTGTTCCAGGAAGGTGTCCTAACAGTTTATTCAGCACTAATTTTGAAATCTATAAATCATAATTTACAACTCTGATCCACATTGCTGCAAGAGCTGCTGAAGAGCTCCTAGGTTTTGCTGACAGGGACGTTATGAAAGTAAAAGAAgtaaacacagcacacaggctGAACTCACTTCAGGTAGAGCTGCCGTTTGGTTCGGAGGTAGTCGGCTCCCTGTAAAGTGAAGCACAGAGACGGGGGATCAGTCGAGCTGCCTGACAGTCGGATATATCCACCGCACAGGCACCCACCGCACGGCTGAGTGTGGTGCTCAGGGGTGATTGTAATGTATATAGTGCGGCTGCTGGATTCGCCCCTACACCGATGCTCCGTCCGGAAGCGAGTGTGAACACAGGGAGTCTCGGTGTACCGCGGGGCCCCACCGCCAGGGTCTCACCTTGCCTTTGGGGATCCTGCCGTCCTTCACCATGTCCAGGAGGGGCTGCACCTCGTCCTTCAACTCCATCAGCTGCACACGAGACAACATGATCACGTTTCCGCTCGACTGGCACAAACGTGACTTCAGTCAGCCGAGCCACCAATGATCGCAAGTCTTTTGAAACAGCCTTATGAGTCACAGCCTGTTGTAATCTTGAAAACTACGACGCTGCCCTGCTGTCTCAGCACACAAACACCCCCATGAGTGGACAGACCCCCGACCCCCCAGCCCCGAAGCCACCCCGAGTGCCACGGCGGCGAGACCCCGGTGATACCCGGGCTCGGACCTTGGCCTTGAAGTCCTGTGCGAGTTCCAGCAGCTCCGGGGACTCCTTCTTCAGCAGCTTCAACTTCTCCTTCTGGGACATCTTCTGCAGGTCCTTCACGATCTTCTGCTCCTTCTCCGGGGCCTTGTGCTCCTCCGACTCCGCGGCGAAGG

Function

symbol description
utp3 Enables enzyme inhibitor activity. Acts upstream of or within with a positive effect on cellular protein-containing complex localization; digestive system development; and protein localization to nucleolus. Predicted to be part of small-subunit processome. Predicted to be active in nucleolus. Is expressed in several structures, including brain; digestive system; and endoderm. Orthologous to human UTP3 (UTP3 small subunit processome component).

NR:

description
PREDICTED: something about silencing protein 10-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151234 True 2910 lncRNA 0.51 5 2861915 2866024

Neighbor

gene id symbol gene type direction distance location
AMCG00002073 ppcs coding upstream 129 2857667 ~ 2861786 (+)
AMCG00002074 rimkla,LOC106567384 coding upstream 19952 2831684 ~ 2841963 (+)
AMCG00002075 NA coding upstream 44943 2816757 ~ 2816972 (+)
AMCG00002060 NA coding upstream 610776 2248017 ~ 2251139 (+)
AMCG00002059 NA coding upstream 641131 2216551 ~ 2220784 (+)
AMCG00002080 NA coding downstream 40841 2906865 ~ 2910535 (+)
AMCG00002081 LOC106572212 coding downstream 81442 2947466 ~ 2952329 (+)
AMCG00002082 NA coding downstream 101341 2967365 ~ 2986779 (+)
AMCG00002088 ybx1,LOC100194660,LOC107733967 coding downstream 129354 2995378 ~ 3004718 (+)
AMCG00002087 NA coding downstream 159040 3025064 ~ 3040023 (+)
G120674 NA non-coding upstream 165508 2696064 ~ 2696407 (+)
G120602 NA non-coding upstream 635935 2225780 ~ 2225980 (+)
G120566 NA non-coding upstream 658544 2202617 ~ 2203371 (+)
G120565 NA non-coding upstream 676935 2184780 ~ 2184980 (+)
G120564 NA non-coding upstream 685473 2174587 ~ 2176442 (+)
G120755 NA non-coding downstream 174543 3040567 ~ 3042435 (+)
G120763 NA non-coding downstream 177616 3043640 ~ 3046804 (+)
G120774 NA non-coding downstream 225770 3091794 ~ 3092899 (+)
G120778 NA non-coding downstream 233583 3099607 ~ 3100142 (+)
G120779 NA non-coding downstream 234254 3100278 ~ 3101046 (+)
AMCG00002076 NA other upstream 7788 2852154 ~ 2854127 (+)
G120518 NA other upstream 921099 1924022 ~ 1940816 (+)
AMCG00002019 NA other upstream 1869151 682670 ~ 992764 (+)
G120742 NA other downstream 90884 2956908 ~ 2959475 (+)
AMCG00002098 NA other downstream 667790 3533814 ~ 3542177 (+)
AMCG00002152 NA other downstream 2352806 5218830 ~ 5226656 (+)
AMCG00002190 acot7 other downstream 3720630 6586654 ~ 6602608 (+)
AMCG00002215 NA other downstream 4527776 7393800 ~ 7411230 (+)

Expression


Co-expression Network