G120746


Basic Information

Item Value
gene id G120746
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 2985573 ~ 2986779 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU151294
ttttttgttttggtcattttatttaaaaaacacacacaaaatgaaatcacCCGAGtcatacaaacatttaatgatCAAATCTGAGACTGATTCAGCCCAACCAAGCTGGGGTCACTCTTCTGTCTGATGGAAAGGAGACGAGCCAGGGGTATTTACTGGGCATATGCTGGGAATGACAGACTCGGCACACCGACACACTGCCAGCGAACTGCAGGAGGAGATTTCAGCTTCGAACAGCAAGGCCGTGTCTCTGTCTTTCCAGAAGCACAGCATCCTCACCGCCTACTTGGTGCACCACCCGGAACTACATCATACATCTGAACAGGATTGAAGACCACATTTTCATATCGCtttcaaattgatttaataGTATCTACCGACTGATACGGCAGCAACATAACCTGCTGCACTGGGGGCAGCATAAGCCTCCAATTCAAGCATTTAGTTGTAGAATGATTTGAGCTGCACAGCCGGGCAGGAGCTTCCTAAAACGAGCACGAGACGAAAAAAGCTGACAGGATCGTTTCATGTCGGATACGGGTGGCTGGTGCTGAAGCAGTTAGTAAAAAGGTCGCCTTCATTTTTGACTGACAGGGCTGTGCAGGGCAGGGAAGGAGAATGACGCACAAGATCTATGCATTGCTGAACCGCTGAAGATGTTTAAAGATTCTAAGTAGATTTACAGTAATtcgagtttgtttttaaatgaggaGAACAATGGGTTACAAACTGGAAATGTGGCCATTGTCTTGATCAGGAATGTGATGAGGCAATACTACGCAAAGCCGAGATCCACATCGGCATCGAGAGTGACAATGCCGTGCAAGGGGCGGCATCCTGGATACCACACGATTGATTCCCGAACCCCAGATCTCGGGGTCGTCCAACACAAAACGTCTCCGGGGGCAGAATCGGGGGCGGGGCAGAGAGGACAGGAGAAATGAGGGttagctgtgtgtgtctggctgtCCTGAATTTAAGGTAAGATCAGTCTGGGTGTGTAAGACTTAAATCCACCGAAACCATTAAAGTATTTCCCtcaccccacaaaaaaaaaaaaggcggcATGCACAAGTTTCCCCCAAGAAGGCAGTCTCTGTTGTTTACCGGCCAGACAGCGGGCGCAGCCTGGGAGTGCGTCACATCTCCCCGCACTGCGCGATCACGATGGGCAGCTTGGGCTTATTGTTGGGCCCAGTGGGCACGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151294 True 1207 lncRNA 0.49 1 2985573 2986779

Neighbor

gene id symbol gene type direction distance location
AMCG00002083 NA coding downstream 24315 2956881 ~ 2961258 (-)
AMCG00002084 NA coding downstream 39420 2935521 ~ 2946153 (-)
AMCG00002077 utp3,LOC102785935 coding downstream 113300 2861912 ~ 2872273 (-)
AMCG00002079 NA coding downstream 128446 2856058 ~ 2857127 (-)
AMCG00002072 foxj3,LOC103362994,LOC101077580 coding downstream 258305 2701238 ~ 2727268 (-)
AMCG00002089 NA coding upstream 56869 3043648 ~ 3066913 (-)
AMCG00002090 NA coding upstream 100765 3087544 ~ 3089884 (-)
AMCG00002092 NA coding upstream 108941 3095720 ~ 3110908 (-)
AMCG00002093 LOC106567259 coding upstream 147329 3134108 ~ 3146480 (-)
AMCG00002095 NA coding upstream 159825 3146604 ~ 3147047 (-)
G120743 NA non-coding downstream 32091 2953273 ~ 2953482 (-)
G120683 NA non-coding downstream 289186 2695581 ~ 2696387 (-)
G120601 NA non-coding downstream 761168 2223343 ~ 2224405 (-)
G120589 NA non-coding downstream 822717 2162641 ~ 2162856 (-)
G120574 NA non-coding downstream 989506 1995768 ~ 1996067 (-)
G120754 NA non-coding upstream 22122 3008901 ~ 3020156 (-)
G120760 NA non-coding upstream 53769 3040548 ~ 3042500 (-)
G120789 NA non-coding upstream 104997 3091776 ~ 3092899 (-)
G120841 NA non-coding upstream 506177 3492956 ~ 3494050 (-)
G120842 NA non-coding upstream 513502 3500281 ~ 3502928 (-)
AMCG00002085 NA other downstream 54555 2921252 ~ 2931018 (-)
AMCG00002078 NA other downstream 137636 2845382 ~ 2847937 (-)
AMCG00002044 NA other downstream 1495006 1486551 ~ 1490567 (-)
G120748 NA other upstream 8729 2995508 ~ 3004917 (-)
AMCG00002094 vamp3,LOC107582408 other upstream 126663 3113442 ~ 3128440 (-)
AMCG00002091 LOC103354943,LOC102299287,LOC101482394,LOC108441428 other upstream 186726 3173505 ~ 3186353 (-)
AMCG00002097 NA other upstream 420706 3407485 ~ 3466461 (-)
G120907 NA other upstream 727088 3713867 ~ 3716252 (-)

Expression


Co-expression Network