Gene
RNA
| Item | Value |
|---|---|
| gene id | G120748 |
| gene name | NA |
| gene type | unknown |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 2995508 ~ 3004917 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0009123 | nucleoside monophosphate metabolic process | biological_process |
| GO:0009124 | nucleoside monophosphate biosynthetic process | biological_process |
| GO:0009126 | purine nucleoside monophosphate metabolic process | biological_process |
| GO:0009127 | purine nucleoside monophosphate biosynthetic process | biological_process |
| GO:0009156 | ribonucleoside monophosphate biosynthetic process | biological_process |
| GO:0009161 | ribonucleoside monophosphate metabolic process | biological_process |
| GO:0009167 | purine ribonucleoside monophosphate metabolic process | biological_process |
| GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | biological_process |
| id | description |
|---|---|
| ko00680 | Methane metabolism |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU151301 | True | 839 | TUCP | 0.48 | 3 | 2995508 | 3004917 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002083 | NA | coding | downstream | 34250 | 2956881 ~ 2961258 (-) |
| AMCG00002084 | NA | coding | downstream | 49355 | 2935521 ~ 2946153 (-) |
| AMCG00002077 | utp3,LOC102785935 | coding | downstream | 123235 | 2861912 ~ 2872273 (-) |
| AMCG00002079 | NA | coding | downstream | 138381 | 2856058 ~ 2857127 (-) |
| AMCG00002072 | foxj3,LOC103362994,LOC101077580 | coding | downstream | 268240 | 2701238 ~ 2727268 (-) |
| AMCG00002089 | NA | coding | upstream | 38731 | 3043648 ~ 3066913 (-) |
| AMCG00002090 | NA | coding | upstream | 82627 | 3087544 ~ 3089884 (-) |
| AMCG00002092 | NA | coding | upstream | 90803 | 3095720 ~ 3110908 (-) |
| AMCG00002093 | LOC106567259 | coding | upstream | 129191 | 3134108 ~ 3146480 (-) |
| AMCG00002095 | NA | coding | upstream | 141687 | 3146604 ~ 3147047 (-) |
| G120746 | NA | non-coding | downstream | 8729 | 2985573 ~ 2986779 (-) |
| G120743 | NA | non-coding | downstream | 42026 | 2953273 ~ 2953482 (-) |
| G120683 | NA | non-coding | downstream | 299121 | 2695581 ~ 2696387 (-) |
| G120601 | NA | non-coding | downstream | 771103 | 2223343 ~ 2224405 (-) |
| G120589 | NA | non-coding | downstream | 832652 | 2162641 ~ 2162856 (-) |
| G120754 | NA | non-coding | upstream | 3984 | 3008901 ~ 3020156 (-) |
| G120760 | NA | non-coding | upstream | 35631 | 3040548 ~ 3042500 (-) |
| G120789 | NA | non-coding | upstream | 86859 | 3091776 ~ 3092899 (-) |
| G120841 | NA | non-coding | upstream | 488039 | 3492956 ~ 3494050 (-) |
| G120842 | NA | non-coding | upstream | 495364 | 3500281 ~ 3502928 (-) |
| AMCG00002085 | NA | other | downstream | 64490 | 2921252 ~ 2931018 (-) |
| AMCG00002078 | NA | other | downstream | 147571 | 2845382 ~ 2847937 (-) |
| AMCG00002044 | NA | other | downstream | 1504941 | 1486551 ~ 1490567 (-) |
| AMCG00002094 | vamp3,LOC107582408 | other | upstream | 108525 | 3113442 ~ 3128440 (-) |
| AMCG00002091 | LOC103354943,LOC102299287,LOC101482394,LOC108441428 | other | upstream | 168588 | 3173505 ~ 3186353 (-) |
| AMCG00002097 | NA | other | upstream | 402568 | 3407485 ~ 3466461 (-) |
| G120907 | NA | other | upstream | 708950 | 3713867 ~ 3716252 (-) |
| G120927 | slc45a1,LOC107756616,LOC106565711,LOC107702000 | other | upstream | 779319 | 3784236 ~ 3786544 (-) |
