G120914


Basic Information

Item Value
gene id G120914
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 3700492 ~ 3704364 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU151516
tctgaactgcctctagagcagcgatatctttcttgaagtgtggtgcccagaacatAGATAAAGGCATCCCTCAAATGAATCTCATTGACAGGGTTTTGTTTCGGTCCGCAGCACTGTTTGTCCGGCTTGTCCAGCACCACGACACCGGCTGCTCCGAGGGTGAGCAGTCTGGACCTGCGCAGCTCTCTGGAAACCGAGGTGTCAACGGGGCCTCCCACAGCAGACCAGGAGCTGTCGGTGTCGAGAGTCGCAGGCAGCCGGCGTTCTGACGACCTGTTAAACGTGTCCCGCCTGGCAAGGTACCACTTCCAGCTGCTGGACCAAAGGCGGGGTTTCACCCAGGACAAACCTCACAGCACGGCCTACCCTGTGTACTGACCTCCACACACGGACACGCCACCACACCGACCTCAATCATTGTTCTTCCAAACCCCTTTTTGAACAGTATACCTGAATCATTCAGCCAGTAAATTGCACTACTCCATAATGCATATTGAAATATAACGTTAATAAGACCTGACGGGGGTGCCCTGTCACGTTGAGGACGCAGGTTGGATCAGGTTCATTTGGTGTAATTGCTGCGTATCTTTCGGTGTGCTCATCAGCCGAGTAAAGGTCAGTCTTGACTGAAACCGTTCTATGTTAATTGTGACCTTTTCAGatgttatgtaatgttttgaagtCGACTACTGTCAAGAACTTGAACGGGTGCAAACCTTTAAGGATTCTTTGTTTTTAACGTGGTAATAAATCATCCTGGTTGGCCGTAATGTGAAACTGCAGTTATCACGAATCTCCCTCGGGACATTCAGCATTTTGTCTGAGTGTTTCCTCCTCCTGTGTAACATTCCTCAGAAGCGCAGATTGTCATTTCCTGTGTCATCTGGCGTGCTTCAGGAATTACACGCCTGTACAGTCATGGCTTCGGGCCTAGAGATTTTGACAGTAAAGACAGTTTGAAGTCACTCTCACATCTCTGCAGCAAATGCAGAGATTTTGCCTGCTTTGCTCTTTTCATGCCGCAATCTAAGAGCTGTAAGAATGTATCAATGATCGCTGCGTGTCCATTCGATGCAGTTTTGCTCGGTAGCCGGCCTCTTCCCTCGTACAAATTAAGATCCATGGCAGCACTGATGGGTATGAATGCAGGGTCCTCAGCGAATGGCACAGGTGAGTATGGGAGTTCAGCCTGCCCTCAAACTGTAGGAAGAAAACAGACTTGGGGACTGGTCCTATGTACTCAGTGTGTACTaagtat

Function

NR:

description
PREDICTED: integrin beta-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151516 True 1258 lncRNA 0.49 2 3700492 3704364

Neighbor

gene id symbol gene type direction distance location
AMCG00002108 NA coding downstream 38722 3641182 ~ 3661770 (-)
AMCG00002103 NA coding downstream 166673 3527352 ~ 3533819 (-)
AMCG00002102 NA coding downstream 189512 3503046 ~ 3510980 (-)
AMCG00002104 NA coding downstream 201686 3496159 ~ 3498806 (-)
AMCG00002096 NA coding downstream 425574 3274423 ~ 3274918 (-)
AMCG00002113 NA coding upstream 63791 3768155 ~ 3777213 (-)
AMCG00002116 NA coding upstream 84694 3789058 ~ 3794546 (-)
AMCG00002118 NA coding upstream 113458 3817822 ~ 3824170 (-)
AMCG00002117 NA coding upstream 121812 3826176 ~ 3834827 (-)
AMCG00002121 NA coding upstream 206834 3911198 ~ 3918187 (-)
G120853 NA non-coding downstream 159666 3538762 ~ 3540826 (-)
G120849 NA non-coding downstream 163967 3535822 ~ 3536525 (-)
G120842 NA non-coding downstream 197564 3500281 ~ 3502928 (-)
G120841 NA non-coding downstream 206442 3492956 ~ 3494050 (-)
G120789 NA non-coding downstream 607593 3091776 ~ 3092899 (-)
G120975 NA non-coding upstream 382744 4087108 ~ 4087418 (-)
G121039 NA non-coding upstream 863075 4567439 ~ 4569294 (-)
G121111 NA non-coding upstream 1012228 4716592 ~ 4722181 (-)
G121151 lrrc38,lrrc38b,LOC107691331,LOC107568719,LOC107555684,LOC108281009,LOC107685631 non-coding upstream 1406238 5110602 ~ 5116017 (-)
G121152 NA non-coding upstream 1423674 5128038 ~ 5137006 (-)
AMCG00002097 NA other downstream 234031 3407485 ~ 3466461 (-)
AMCG00002091 LOC103354943,LOC102299287,LOC101482394,LOC108441428 other downstream 514139 3173505 ~ 3186353 (-)
AMCG00002094 vamp3,LOC107582408 other downstream 572052 3113442 ~ 3128440 (-)
G120748 NA other downstream 695575 2995508 ~ 3004917 (-)
AMCG00002085 NA other downstream 769474 2921252 ~ 2931018 (-)
G120907 NA other upstream 9503 3713867 ~ 3716252 (-)
G120927 slc45a1,LOC107756616,LOC106565711,LOC107702000 other upstream 79872 3784236 ~ 3786544 (-)
G120993 NA other upstream 510351 4214715 ~ 4219877 (-)
AMCG00002167 NA other upstream 2271361 5975725 ~ 6015393 (-)
AMCG00002223 NA other upstream 4122277 7826641 ~ 7839411 (-)

Expression


Co-expression Network